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The map label for this gene is ycaK [C]

Identifier: 146302259

GI number: 146302259

Start: 5471003

End: 5471581

Strand: Reverse

Name: ycaK [C]

Synonym: Fjoh_4532

Alternate gene names: 146302259

Gene position: 5471581-5471003 (Counterclockwise)

Preceding gene: 146302260

Following gene: 146302256

Centisome position: 89.74

GC content: 35.58

Gene sequence:

>579_bases
ATGAAAAACATCTTGATCATAAACGGGCACCCAAACCCCGACAGTTTTAATTTTGCTATTGCAGAATCTTATAAAAAAGG
TGCAGATGCTTCTGGAGCACAAGTAGAAACAATAACAATTGCGGATTTAAACTTTAATCCCAATTTAAAATTTGGTTACC
AAAAACGAACTGAATTAGAACCTGATTTACTCGAATCATGGGAAAAAATAAAAAGAGCCGATCATTTAGTGTGGATTCAT
CCCGTTTGGTGGGGCGGACTTCCGGCAGTTGCAAAAGGATTTATTGATCGTTTGTTTTTACCCGGAATGGCTTTTCAGTA
TCGTGAAAACTCCGTTTGGTGGGATAAATTGCTCAAAGGTAAAACGGCACATATTATAACCACTTTAGATCAGCCCGGAT
GGTTTTATAGATTGTCTTTTGGAAGACCAAGCGTAAATCAGTTAAAAAAATCAACTTTGGGATTTTGCGGTGTAAAACCC
GTAAAAGTCAGTTACATCGGAATTATTAAAAATTCTGATGAAAATCAAAGAAAAAAATGGCTCGAAAAAGTATATAATTT
CGGTGTCCGAAATAAATAA

Upstream 100 bases:

>100_bases
TCTGCTAAATCTACGTTAAACATTAAAATTTAAATAAGTTTTTTAGGACATTTGTCCAGTAGAATAAATAAGCCGAGTGG
TATTTTTGAAAAAAAATGAT

Downstream 100 bases:

>100_bases
AAAAGCAGTGTAGAATTAATCTTTTAAATCCAATCCAAATGTTGAACGCAAAAGCTCGATGTTTGGATTGATTTCTAAGA
AACGATTGTAACGGTCTTGA

Product: NAD(P)H dehydrogenase (quinone)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKNILIINGHPNPDSFNFAIAESYKKGADASGAQVETITIADLNFNPNLKFGYQKRTELEPDLLESWEKIKRADHLVWIH
PVWWGGLPAVAKGFIDRLFLPGMAFQYRENSVWWDKLLKGKTAHIITTLDQPGWFYRLSFGRPSVNQLKKSTLGFCGVKP
VKVSYIGIIKNSDENQRKKWLEKVYNFGVRNK

Sequences:

>Translated_192_residues
MKNILIINGHPNPDSFNFAIAESYKKGADASGAQVETITIADLNFNPNLKFGYQKRTELEPDLLESWEKIKRADHLVWIH
PVWWGGLPAVAKGFIDRLFLPGMAFQYRENSVWWDKLLKGKTAHIITTLDQPGWFYRLSFGRPSVNQLKKSTLGFCGVKP
VKVSYIGIIKNSDENQRKKWLEKVYNFGVRNK
>Mature_192_residues
MKNILIINGHPNPDSFNFAIAESYKKGADASGAQVETITIADLNFNPNLKFGYQKRTELEPDLLESWEKIKRADHLVWIH
PVWWGGLPAVAKGFIDRLFLPGMAFQYRENSVWWDKLLKGKTAHIITTLDQPGWFYRLSFGRPSVNQLKKSTLGFCGVKP
VKVSYIGIIKNSDENQRKKWLEKVYNFGVRNK

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003680 [H]

Pfam domain/function: PF02525 Flavodoxin_2 [H]

EC number: 1.6.99.- [C]

Molecular weight: Translated: 22069; Mature: 22069

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNILIINGHPNPDSFNFAIAESYKKGADASGAQVETITIADLNFNPNLKFGYQKRTELE
CCCEEEEECCCCCCCEEEHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCEECCCCCCCCC
PDLLESWEKIKRADHLVWIHPVWWGGLPAVAKGFIDRLFLPGMAFQYRENSVWWDKLLKG
HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCC
KTAHIITTLDQPGWFYRLSFGRPSVNQLKKSTLGFCGVKPVKVSYIGIIKNSDENQRKKW
CCEEEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCEEEEEEEEEEECCCHHHHHHH
LEKVYNFGVRNK
HHHHHCCCCCCC
>Mature Secondary Structure
MKNILIINGHPNPDSFNFAIAESYKKGADASGAQVETITIADLNFNPNLKFGYQKRTELE
CCCEEEEECCCCCCCEEEHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCEECCCCCCCCC
PDLLESWEKIKRADHLVWIHPVWWGGLPAVAKGFIDRLFLPGMAFQYRENSVWWDKLLKG
HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCC
KTAHIITTLDQPGWFYRLSFGRPSVNQLKKSTLGFCGVKPVKVSYIGIIKNSDENQRKKW
CCEEEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCEEEEEEEEEEECCCHHHHHHH
LEKVYNFGVRNK
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]