| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302200
Identifier: 146302200
GI number: 146302200
Start: 5390897
End: 5391586
Strand: Direct
Name: 146302200
Synonym: Fjoh_4471
Alternate gene names: NA
Gene position: 5390897-5391586 (Clockwise)
Preceding gene: 146302199
Following gene: 146302201
Centisome position: 88.42
GC content: 40.58
Gene sequence:
>690_bases ATGGAATTGGAAAAACATTATGTAAACAGAGTGGGTTGGTTAAGAGCTGCTGTTTTAGGAGCTAATGACGGATTGCTTTC CACCACAAGTATTGTAATCGGAGTTGCTGCCGCAGATCCCAGCCGACATGCTATAATTTTGGCGGCTTTGGCGGGAACCA TCGCAGGAGCAATGTCGATGGCCGCAGGAGAATATGTTTCTGTAAGCTCACAAGCTGATACAGAAAAATCGGATATAAAC AGGGAGAAGAAAGAGTTAGAAAAAATGCCTGAAATTGAACTCCACGAATTGGCAAAAATTTATGAAAAAAGAGGTGTAAG CAAAGAAACAGCAATGCTCGTGGCGAAAGAACTTACAGATCACAATGCACTGGAAGCACATACAAAAGACGAATTAGGAA TAAACGAGATTACTGTAGCAAAACCTTTTCAGGCTTCAGTAGCATCGTTTTTCTCTTTTCTTTCCGGAGCAGCGTTGCCA ATGATGGTCTCCATTTTTGCTCCAGAAAAAAATATGGTGTATTACCAATATGGTTTTTCGATTATTTTCTTAATGATTTT GGGGGCTATTGCTGCCAAAACAGGAGGCTCCAATATAGGGGTCGCAATAGTTAGAATTTGCTTCTGGGGGACTATTGCAA TGGTAATAACGGCAATTGTTGGGTATGTATTTGGCGTAAATATTTCCTAA
Upstream 100 bases:
>100_bases GCGGAATCGTAATTGGTGAACTGACAAATAAAAAAGGAATAGTATCTAAGATGGTAGGTGGAGAATAAAAATAATATAAA CTATATAAATAATTATAAAA
Downstream 100 bases:
>100_bases CAATGATGAACGGCAAAATCAAAAGAATATTTAGGTTTTAATCCCAATGTAATTGTCAATTTAATAAATATTGATACAAT GGATATATCAAAGCAAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: Nodulin; Nodulin-Related Protein; Nodulin-; Iron And Manganese Transporter; Nodulin-Like Protein-Like Protein; Transmembrane Protein; Ypothetical Protein SMU.; Nodulin-Related Transmembrane Protein; Nodulin- Domain-Containing Protein; Nodulin-Related Integral Membrane Protein DUF; Mebrane Associated Protein DUF
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MELEKHYVNRVGWLRAAVLGANDGLLSTTSIVIGVAAADPSRHAIILAALAGTIAGAMSMAAGEYVSVSSQADTEKSDIN REKKELEKMPEIELHELAKIYEKRGVSKETAMLVAKELTDHNALEAHTKDELGINEITVAKPFQASVASFFSFLSGAALP MMVSIFAPEKNMVYYQYGFSIIFLMILGAIAAKTGGSNIGVAIVRICFWGTIAMVITAIVGYVFGVNIS
Sequences:
>Translated_229_residues MELEKHYVNRVGWLRAAVLGANDGLLSTTSIVIGVAAADPSRHAIILAALAGTIAGAMSMAAGEYVSVSSQADTEKSDIN REKKELEKMPEIELHELAKIYEKRGVSKETAMLVAKELTDHNALEAHTKDELGINEITVAKPFQASVASFFSFLSGAALP MMVSIFAPEKNMVYYQYGFSIIFLMILGAIAAKTGGSNIGVAIVRICFWGTIAMVITAIVGYVFGVNIS >Mature_229_residues MELEKHYVNRVGWLRAAVLGANDGLLSTTSIVIGVAAADPSRHAIILAALAGTIAGAMSMAAGEYVSVSSQADTEKSDIN REKKELEKMPEIELHELAKIYEKRGVSKETAMLVAKELTDHNALEAHTKDELGINEITVAKPFQASVASFFSFLSGAALP MMVSIFAPEKNMVYYQYGFSIIFLMILGAIAAKTGGSNIGVAIVRICFWGTIAMVITAIVGYVFGVNIS
Specific function: Unknown
COG id: COG1814
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24534; Mature: 24534
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELEKHYVNRVGWLRAAVLGANDGLLSTTSIVIGVAAADPSRHAIILAALAGTIAGAMSM CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHH AAGEYVSVSSQADTEKSDINREKKELEKMPEIELHELAKIYEKRGVSKETAMLVAKELTD HCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCC HNALEAHTKDELGINEITVAKPFQASVASFFSFLSGAALPMMVSIFAPEKNMVYYQYGFS CCHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEHHHHH IIFLMILGAIAAKTGGSNIGVAIVRICFWGTIAMVITAIVGYVFGVNIS HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MELEKHYVNRVGWLRAAVLGANDGLLSTTSIVIGVAAADPSRHAIILAALAGTIAGAMSM CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHH AAGEYVSVSSQADTEKSDINREKKELEKMPEIELHELAKIYEKRGVSKETAMLVAKELTD HCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCC HNALEAHTKDELGINEITVAKPFQASVASFFSFLSGAALPMMVSIFAPEKNMVYYQYGFS CCHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEHHHHH IIFLMILGAIAAKTGGSNIGVAIVRICFWGTIAMVITAIVGYVFGVNIS HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA