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The map label for this gene is srpC [H]

Identifier: 146302149

GI number: 146302149

Start: 5328357

End: 5329487

Strand: Reverse

Name: srpC [H]

Synonym: Fjoh_4416

Alternate gene names: 146302149

Gene position: 5329487-5328357 (Counterclockwise)

Preceding gene: 146302160

Following gene: 146302148

Centisome position: 87.41

GC content: 40.94

Gene sequence:

>1131_bases
ATGGAGACTAAAGCAGATTTAAAAGAGATCGCAAAAGTTTTTCTAAAACTTGGCATTATTGGTTTTGGCGGCCCTGCTGC
ACATATTGCCATGATGCAGGATGAAGTGGTTAGAAAAAGGAAATGGCTGACCGAACAGCATTTTTTGGACTTAATTGGTG
CAGTAAACCTGATTCCAGGGCCCAATAGCACGGAAATGGCAGTCCATATCGGCCACGAAAAAGGAGGCTGGAAAGGTTTG
ATGATCGCAGGGCTTTGTTTTATTTTGCCAGCCGTTTTTATTATGGGAATTTTTGCTTACTTCTATAAGCAGCACGGACA
AATCCCGGAAGCACAGCCTTTTATTTATGGAATAAAACCGGCCGTTATTGCTGTTATTGTTGGTGCGGTTTTTCCATTGG
CAAAAAAAGCGCTGAAATCAGCAGAACTGGTACTCATCGGACTGCTTGTTTTGTCGGGTTCACTCTCCGGCTTCAGTGAA
ATATATTTGATGTTTGGTGCTGGATTTTTTGCTTTGCTGCTGACTTATATGCGAGACAGAAAGCAAAGCAATATCAAAGG
TTTTGTTCCTTTGTCTCTAGTGCAGATCACGCACCCGGCAATTCTGGCACCCGGCAGTGCAAATCTGTTTTTTATTTTTC
TAAAAATTGGGGCTGTACTTTACGGAAGCGGTTATGTTTTGTTTGCTTTTCTTGACACAGAATTAGTTTCAACAGGGCTT
TTAACACGCCAGCAATTGATTGACGCAATTGCAGCAGGGCAATTCACACCTGGACCCGTTTTTTCTTCAGTAACTTTTAT
AGGTTATCAAATCAACGGTTTCACAGGAGCAGCGGTTTCGACAATTGCCATATTTTTACCTTCTTTTATATTTGTGGCAT
TGTTAAATCCAATGGTAAAGAGAATGCGAAACTCACAACTATTTGCAGTATTTTTGGACGCGGTAAATGTGGCATCAGTA
GCAATAATTGCTGCAGTTTGTTTTGATATGGGAAAAGAAGCGATTACCGACTGGCGGACAATTTTAATCGCAGTTTTAAG
TCTGGCAATTGCATTTGGATACAAGAAATTAAATAGTGCTTTTGTAGTTTTAGGCGGTTCGTTAATGGGCTGTCTGCTGA
CCCTTATATGA

Upstream 100 bases:

>100_bases
ATGATGCATGGAAGCAGAACGGACTGTAATGCTTTTGGGAAGCATTTTTTATCGATTAAAGGCGCAGGGTATGGGTCGGT
GGACAATATTTTAACGAAAA

Downstream 100 bases:

>100_bases
CCAGAAACATATATGCTGATAAGCAGGGAGGGCAGCAGATTTAACAAATATGTAAAAAAAACAAAATATTATAATAATAA
AGCACAGCAGTAAAAAGCAA

Product: chromate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
METKADLKEIAKVFLKLGIIGFGGPAAHIAMMQDEVVRKRKWLTEQHFLDLIGAVNLIPGPNSTEMAVHIGHEKGGWKGL
MIAGLCFILPAVFIMGIFAYFYKQHGQIPEAQPFIYGIKPAVIAVIVGAVFPLAKKALKSAELVLIGLLVLSGSLSGFSE
IYLMFGAGFFALLLTYMRDRKQSNIKGFVPLSLVQITHPAILAPGSANLFFIFLKIGAVLYGSGYVLFAFLDTELVSTGL
LTRQQLIDAIAAGQFTPGPVFSSVTFIGYQINGFTGAAVSTIAIFLPSFIFVALLNPMVKRMRNSQLFAVFLDAVNVASV
AIIAAVCFDMGKEAITDWRTILIAVLSLAIAFGYKKLNSAFVVLGGSLMGCLLTLI

Sequences:

>Translated_376_residues
METKADLKEIAKVFLKLGIIGFGGPAAHIAMMQDEVVRKRKWLTEQHFLDLIGAVNLIPGPNSTEMAVHIGHEKGGWKGL
MIAGLCFILPAVFIMGIFAYFYKQHGQIPEAQPFIYGIKPAVIAVIVGAVFPLAKKALKSAELVLIGLLVLSGSLSGFSE
IYLMFGAGFFALLLTYMRDRKQSNIKGFVPLSLVQITHPAILAPGSANLFFIFLKIGAVLYGSGYVLFAFLDTELVSTGL
LTRQQLIDAIAAGQFTPGPVFSSVTFIGYQINGFTGAAVSTIAIFLPSFIFVALLNPMVKRMRNSQLFAVFLDAVNVASV
AIIAAVCFDMGKEAITDWRTILIAVLSLAIAFGYKKLNSAFVVLGGSLMGCLLTLI
>Mature_376_residues
METKADLKEIAKVFLKLGIIGFGGPAAHIAMMQDEVVRKRKWLTEQHFLDLIGAVNLIPGPNSTEMAVHIGHEKGGWKGL
MIAGLCFILPAVFIMGIFAYFYKQHGQIPEAQPFIYGIKPAVIAVIVGAVFPLAKKALKSAELVLIGLLVLSGSLSGFSE
IYLMFGAGFFALLLTYMRDRKQSNIKGFVPLSLVQITHPAILAPGSANLFFIFLKIGAVLYGSGYVLFAFLDTELVSTGL
LTRQQLIDAIAAGQFTPGPVFSSVTFIGYQINGFTGAAVSTIAIFLPSFIFVALLNPMVKRMRNSQLFAVFLDAVNVASV
AIIAAVCFDMGKEAITDWRTILIAVLSLAIAFGYKKLNSAFVVLGGSLMGCLLTLI

Specific function: May function in the active transport of chromate into the cell under sulfur-deficient conditions [H]

COG id: COG2059

COG function: function code P; Chromate transport protein ChrA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003370
- InterPro:   IPR014047 [H]

Pfam domain/function: PF02417 Chromate_transp [H]

EC number: NA

Molecular weight: Translated: 40495; Mature: 40495

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METKADLKEIAKVFLKLGIIGFGGPAAHIAMMQDEVVRKRKWLTEQHFLDLIGAVNLIPG
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PNSTEMAVHIGHEKGGWKGLMIAGLCFILPAVFIMGIFAYFYKQHGQIPEAQPFIYGIKP
CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHH
AVIAVIVGAVFPLAKKALKSAELVLIGLLVLSGSLSGFSEIYLMFGAGFFALLLTYMRDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KQSNIKGFVPLSLVQITHPAILAPGSANLFFIFLKIGAVLYGSGYVLFAFLDTELVSTGL
HHCCCCCCCHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHH
LTRQQLIDAIAAGQFTPGPVFSSVTFIGYQINGFTGAAVSTIAIFLPSFIFVALLNPMVK
HHHHHHHHHHHCCCCCCCCHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RMRNSQLFAVFLDAVNVASVAIIAAVCFDMGKEAITDWRTILIAVLSLAIAFGYKKLNSA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FVVLGGSLMGCLLTLI
CEEECHHHHHHHHHHC
>Mature Secondary Structure
METKADLKEIAKVFLKLGIIGFGGPAAHIAMMQDEVVRKRKWLTEQHFLDLIGAVNLIPG
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PNSTEMAVHIGHEKGGWKGLMIAGLCFILPAVFIMGIFAYFYKQHGQIPEAQPFIYGIKP
CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHH
AVIAVIVGAVFPLAKKALKSAELVLIGLLVLSGSLSGFSEIYLMFGAGFFALLLTYMRDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KQSNIKGFVPLSLVQITHPAILAPGSANLFFIFLKIGAVLYGSGYVLFAFLDTELVSTGL
HHCCCCCCCHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHH
LTRQQLIDAIAAGQFTPGPVFSSVTFIGYQINGFTGAAVSTIAIFLPSFIFVALLNPMVK
HHHHHHHHHHHCCCCCCCCHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RMRNSQLFAVFLDAVNVASVAIIAAVCFDMGKEAITDWRTILIAVLSLAIAFGYKKLNSA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FVVLGGSLMGCLLTLI
CEEECHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7536734 [H]