Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146302137

Identifier: 146302137

GI number: 146302137

Start: 5310465

End: 5311517

Strand: Direct

Name: 146302137

Synonym: Fjoh_4403

Alternate gene names: NA

Gene position: 5310465-5311517 (Clockwise)

Preceding gene: 146302136

Following gene: 146302138

Centisome position: 87.1

GC content: 42.45

Gene sequence:

>1053_bases
ATGAAAAATTTACTCTTTTTTTTATTTTCTATACTAATATTTCAAACAGCACAGTCTCAAAAAAATTCTTTAAAAAAGAT
CTTAGTCCTGCAGCAGCCAGGTATCAAAGACACCATATTTCATTTAAGCACCCTGGATTCCATTAGGGCAGATCTACCCG
CAACTCTAATTAAAGGCAGCCAGAGCGGTCCCACTTTTACAATAACGGCAGGTATTCACGGAATGGAATATCCCGCTATA
GCCTCTTTGCTGCAGCTTCGCAGGGAAATAAATCCTCAAAAACTTAAAGGAAATTTAATCATTATTCCCATCATGAACCT
GCAGTCCTTCTACCAAAGAACTCCTTTTGTAAACCCCTCTGACAACCTGAACTTAAACCGCGTTTTTCCAGGAAACAAAA
CAGGAAGTATCACCGAGGTAATTGCTGATTTTATAACCACTCAGGTTTTTGACGCCACGGACGTGTTTCTGGATCTGCAT
GGCGGGGATGTCAATGAAGATCTCATACCCTTTATCTGTTATTACGATAACAAGGAATTCAAAGAGCAGACCCGGCTGGT
TTCCCGTCTTAGTGAAAACAGCGGTTTTTCCACCATTGTGAGTTATCCCTATGTCATCGCCGAAGGCCGGCCGGCGATGT
ATGCCTTTAAGCAGGCCGTAAGGCTGGGCATCCCGGCGCTAAGCATTGAAATTGGAAAGCTTGGCAACTGCGAGAAGTCA
GATGTTTCCTTTACTAAAAATGCAGTTTACCTCATGCTCAAAGAGCTGCAAATGTATGAAAGCAAAAAAGTGATACCAGG
TGCTCCTGCAAAAAACAAATATAACAGGCAGGCCTACGTTCCAGGACCCGGCCAGGGATTATTTTACAGCAGTTTTAAAG
CAGGAAGCAGAGTTATAAAAGAAGAGGAAATTGGCTATATCACAGATGTTTTTGGCCGTAATGTGAAAATAATCACCGCG
CCCCAAAGCGGCACAATTCTCTATAAGGCAGGAAGACTGCCGGTAAACGAAGGCGAAACATTATTCTGTATCGGCTATAA
GGCTGTGAATTAA

Upstream 100 bases:

>100_bases
TGTTTTTCTCCCTGCAGCAAATTGAATCCCGGGCTATTATTTTGAATTTAAATCAACTAAAAAATAACCTATTAAGCGCC
ATAGTCGCTTTAAGATACGC

Downstream 100 bases:

>100_bases
TTTTATATCAATACCGAAAGCTCCAAGATCATGCCGCTTTGAAAAGTTTTTATCTTCATGAACAATACTGCCTGCTGTCA
GCCGTTTACAATAGTTCGGT

Product: succinylglutamate desuccinylase/aspartoacylase

Products: NA

Alternate protein names: Ectoine Utilization Protein EutE; Succinylglutamate Desuccinylase / Aspartoacylase Family; Deacylase; Succinylglutamate Desuccinylase/Aspartoacylase Family; Succinate Dehydrogenase Subunit; Deacylase-Like; Succinylglutamate Desuccinylase; Aminoacylase-2/Carboxypeptidase-Z Family Hydrolase; AstE/AspA Family Protein; N-Acetyl Diamonbutyric Acid Acylase

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MKNLLFFLFSILIFQTAQSQKNSLKKILVLQQPGIKDTIFHLSTLDSIRADLPATLIKGSQSGPTFTITAGIHGMEYPAI
ASLLQLRREINPQKLKGNLIIIPIMNLQSFYQRTPFVNPSDNLNLNRVFPGNKTGSITEVIADFITTQVFDATDVFLDLH
GGDVNEDLIPFICYYDNKEFKEQTRLVSRLSENSGFSTIVSYPYVIAEGRPAMYAFKQAVRLGIPALSIEIGKLGNCEKS
DVSFTKNAVYLMLKELQMYESKKVIPGAPAKNKYNRQAYVPGPGQGLFYSSFKAGSRVIKEEEIGYITDVFGRNVKIITA
PQSGTILYKAGRLPVNEGETLFCIGYKAVN

Sequences:

>Translated_350_residues
MKNLLFFLFSILIFQTAQSQKNSLKKILVLQQPGIKDTIFHLSTLDSIRADLPATLIKGSQSGPTFTITAGIHGMEYPAI
ASLLQLRREINPQKLKGNLIIIPIMNLQSFYQRTPFVNPSDNLNLNRVFPGNKTGSITEVIADFITTQVFDATDVFLDLH
GGDVNEDLIPFICYYDNKEFKEQTRLVSRLSENSGFSTIVSYPYVIAEGRPAMYAFKQAVRLGIPALSIEIGKLGNCEKS
DVSFTKNAVYLMLKELQMYESKKVIPGAPAKNKYNRQAYVPGPGQGLFYSSFKAGSRVIKEEEIGYITDVFGRNVKIITA
PQSGTILYKAGRLPVNEGETLFCIGYKAVN
>Mature_350_residues
MKNLLFFLFSILIFQTAQSQKNSLKKILVLQQPGIKDTIFHLSTLDSIRADLPATLIKGSQSGPTFTITAGIHGMEYPAI
ASLLQLRREINPQKLKGNLIIIPIMNLQSFYQRTPFVNPSDNLNLNRVFPGNKTGSITEVIADFITTQVFDATDVFLDLH
GGDVNEDLIPFICYYDNKEFKEQTRLVSRLSENSGFSTIVSYPYVIAEGRPAMYAFKQAVRLGIPALSIEIGKLGNCEKS
DVSFTKNAVYLMLKELQMYESKKVIPGAPAKNKYNRQAYVPGPGQGLFYSSFKAGSRVIKEEEIGYITDVFGRNVKIITA
PQSGTILYKAGRLPVNEGETLFCIGYKAVN

Specific function: Unknown

COG id: COG3608

COG function: function code R; Predicted deacylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38949; Mature: 38949

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLLFFLFSILIFQTAQSQKNSLKKILVLQQPGIKDTIFHLSTLDSIRADLPATLIKGS
CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHCCC
QSGPTFTITAGIHGMEYPAIASLLQLRREINPQKLKGNLIIIPIMNLQSFYQRTPFVNPS
CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHCCCCEEEEECCCHHHHHHHCCCCCCC
DNLNLNRVFPGNKTGSITEVIADFITTQVFDATDVFLDLHGGDVNEDLIPFICYYDNKEF
CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEEECCHHH
KEQTRLVSRLSENSGFSTIVSYPYVIAEGRPAMYAFKQAVRLGIPALSIEIGKLGNCEKS
HHHHHHHHHHHCCCCCEEEECCCEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCC
DVSFTKNAVYLMLKELQMYESKKVIPGAPAKNKYNRQAYVPGPGQGLFYSSFKAGSRVIK
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCEECCHHHCHHHHH
EEEIGYITDVFGRNVKIITAPQSGTILYKAGRLPVNEGETLFCIGYKAVN
HHCCCHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MKNLLFFLFSILIFQTAQSQKNSLKKILVLQQPGIKDTIFHLSTLDSIRADLPATLIKGS
CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHCCC
QSGPTFTITAGIHGMEYPAIASLLQLRREINPQKLKGNLIIIPIMNLQSFYQRTPFVNPS
CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHCCCCEEEEECCCHHHHHHHCCCCCCC
DNLNLNRVFPGNKTGSITEVIADFITTQVFDATDVFLDLHGGDVNEDLIPFICYYDNKEF
CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEEECCHHH
KEQTRLVSRLSENSGFSTIVSYPYVIAEGRPAMYAFKQAVRLGIPALSIEIGKLGNCEKS
HHHHHHHHHHHCCCCCEEEECCCEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCC
DVSFTKNAVYLMLKELQMYESKKVIPGAPAKNKYNRQAYVPGPGQGLFYSSFKAGSRVIK
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCEECCHHHCHHHHH
EEEIGYITDVFGRNVKIITAPQSGTILYKAGRLPVNEGETLFCIGYKAVN
HHCCCHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA