Click here to switch to the map view.

The map label for this gene is 146302118

Identifier: 146302118

GI number: 146302118

Start: 5290497

End: 5290928

Strand: Direct

Name: 146302118

Synonym: Fjoh_4383

Alternate gene names: NA

Gene position: 5290497-5290928 (Clockwise)

Preceding gene: 146302116

Following gene: 146302119

Centisome position: 86.77

GC content: 42.82

Gene sequence:

>432_bases
TTGAGAAAAGACAGAAAAAATACTCACTTAAAATGTTGCATCATGGAAATCTCCGGACGAATTACAAAAGATGCCGTAAC
GGCAAAAGTTTCAAATGACAGGGAGGTGGTAAATTTCTCCATTGCCATAAACGACAGCTACAGACCAAAAGGGGCTGAGG
AGCTTAAAAAGATTGTAACCTACATCGACTGCTCCTATTGGATGGGTTCCAAAATGGCGCAGTGGCTTAAAAAAGGCACT
GTGGTTGAACTCTTCGGGCGTATAGGTCTGAATGTCTACAATAATGCCGAGGGCAAAGCGCTCGGTTCGCTGACCTTTCA
CACCAGTAATATTAAAATACTGGTGTTCCCAAAAACAGAAAACAGTTCTTCTCTTCCCGCAGTTCAAAAGAAAAATACGG
ATCAAGACACCCCTGACGACCTGCCTTTCTAA

Upstream 100 bases:

>100_bases
GCCGCCCTTCGGGACTTATAGCACTCCGGATCCTTTATCGGGCGCTTGATTTTGTGCTTTCTTTTTTCCCGTTTTTTCTT
TGAAAAATTTTATGCGGGGC

Downstream 100 bases:

>100_bases
TTGGAATATATACCGTTTCACATCAAAATTTATACGCCATGAAAGCCTTTGAAAAATCAGTTTACATAGAATATCCCGTA
TCCGCCCAGTTCAAAAAAAT

Product: single-strand binding protein/primosomal replication protein n

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MRKDRKNTHLKCCIMEISGRITKDAVTAKVSNDREVVNFSIAINDSYRPKGAEELKKIVTYIDCSYWMGSKMAQWLKKGT
VVELFGRIGLNVYNNAEGKALGSLTFHTSNIKILVFPKTENSSSLPAVQKKNTDQDTPDDLPF

Sequences:

>Translated_143_residues
MRKDRKNTHLKCCIMEISGRITKDAVTAKVSNDREVVNFSIAINDSYRPKGAEELKKIVTYIDCSYWMGSKMAQWLKKGT
VVELFGRIGLNVYNNAEGKALGSLTFHTSNIKILVFPKTENSSSLPAVQKKNTDQDTPDDLPF
>Mature_143_residues
MRKDRKNTHLKCCIMEISGRITKDAVTAKVSNDREVVNFSIAINDSYRPKGAEELKKIVTYIDCSYWMGSKMAQWLKKGT
VVELFGRIGLNVYNNAEGKALGSLTFHTSNIKILVFPKTENSSSLPAVQKKNTDQDTPDDLPF

Specific function: Unknown

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16075; Mature: 16075

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKDRKNTHLKCCIMEISGRITKDAVTAKVSNDREVVNFSIAINDSYRPKGAEELKKIVT
CCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHH
YIDCSYWMGSKMAQWLKKGTVVELFGRIGLNVYNNAEGKALGSLTFHTSNIKILVFPKTE
HHCCHHHHHHHHHHHHHCCCCEEEHHHHCCEEEECCCCCEEEEEEEECCCEEEEEEECCC
NSSSLPAVQKKNTDQDTPDDLPF
CCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKDRKNTHLKCCIMEISGRITKDAVTAKVSNDREVVNFSIAINDSYRPKGAEELKKIVT
CCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHH
YIDCSYWMGSKMAQWLKKGTVVELFGRIGLNVYNNAEGKALGSLTFHTSNIKILVFPKTE
HHCCHHHHHHHHHHHHHCCCCEEEHHHHCCEEEECCCCCEEEEEEEECCCEEEEEEECCC
NSSSLPAVQKKNTDQDTPDDLPF
CCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA