Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146302114

Identifier: 146302114

GI number: 146302114

Start: 5286105

End: 5286497

Strand: Direct

Name: 146302114

Synonym: Fjoh_4379

Alternate gene names: NA

Gene position: 5286105-5286497 (Clockwise)

Preceding gene: 146302110

Following gene: 146302115

Centisome position: 86.7

GC content: 39.44

Gene sequence:

>393_bases
ATGGAAGACAAAAACAGCAGCAGAAACAGATGGCTGCACATCCGGCTGACAAAAGAAGAATTTGATTTTATTGATAAGAA
TTTCAAAGCGTCAGCCTGCCGCAAACGAAGTGATTTCGTGCGCAGAAATCTGCTGAGAAAACCCATTGTAATGAGATATA
GAAACGAGTCGCTGGATAAGCTGCTGCAGGAGCTTATCCAGCTCAGAACACAGCTGAATTTCATGGGAAATAATTTCAAT
CAGAGCGTTAAAAAACTCCATACCCTTTTTGAAATTGCCGATTTCAGAATTTGGATTCTGGCTTTTGATTCCGACAGGAA
CAGATATTTTTCGCTGGTTGAAGAAATAAAAAAACACATTGAAAATCTCGCCCAAAAATGGTTGCAGTCATAA

Upstream 100 bases:

>100_bases
TTGTATCACAACCAAAAATCTTGCTGCCCCTCTGCTCGGAACTCGCTGGCAGTGAAACTTTAAGATTGAATGAAATTGCA
ACAATAAAAAAGAAAAGATC

Downstream 100 bases:

>100_bases
ACACAGGACACTCGATAAGAGGCGTCCTAATGTATAATGAGAATAAAGTTTCCCAGGGCGCAGCTGTGTGCATCGGCGAG
GGAAATTATCCCATCGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MEDKNSSRNRWLHIRLTKEEFDFIDKNFKASACRKRSDFVRRNLLRKPIVMRYRNESLDKLLQELIQLRTQLNFMGNNFN
QSVKKLHTLFEIADFRIWILAFDSDRNRYFSLVEEIKKHIENLAQKWLQS

Sequences:

>Translated_130_residues
MEDKNSSRNRWLHIRLTKEEFDFIDKNFKASACRKRSDFVRRNLLRKPIVMRYRNESLDKLLQELIQLRTQLNFMGNNFN
QSVKKLHTLFEIADFRIWILAFDSDRNRYFSLVEEIKKHIENLAQKWLQS
>Mature_130_residues
MEDKNSSRNRWLHIRLTKEEFDFIDKNFKASACRKRSDFVRRNLLRKPIVMRYRNESLDKLLQELIQLRTQLNFMGNNFN
QSVKKLHTLFEIADFRIWILAFDSDRNRYFSLVEEIKKHIENLAQKWLQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15937; Mature: 15937

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDKNSSRNRWLHIRLTKEEFDFIDKNFKASACRKRSDFVRRNLLRKPIVMRYRNESLDK
CCCCCCCCCCEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHH
LLQELIQLRTQLNFMGNNFNQSVKKLHTLFEIADFRIWILAFDSDRNRYFSLVEEIKKHI
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHH
ENLAQKWLQS
HHHHHHHHCC
>Mature Secondary Structure
MEDKNSSRNRWLHIRLTKEEFDFIDKNFKASACRKRSDFVRRNLLRKPIVMRYRNESLDK
CCCCCCCCCCEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHH
LLQELIQLRTQLNFMGNNFNQSVKKLHTLFEIADFRIWILAFDSDRNRYFSLVEEIKKHI
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHH
ENLAQKWLQS
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA