Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302112

Identifier: 146302112

GI number: 146302112

Start: 5283715

End: 5285193

Strand: Reverse

Name: 146302112

Synonym: Fjoh_4377

Alternate gene names: NA

Gene position: 5285193-5283715 (Counterclockwise)

Preceding gene: 146302113

Following gene: 146302111

Centisome position: 86.69

GC content: 33.6

Gene sequence:

>1479_bases
ATGAATTCTAAGAATAACATAAAAAAATATATAATAGAGACAGTCTGTGTTTTGCATATACTGCTATTTGTATACGCTTC
AGTAAGTAAACTTCTGGATTTTGAAAATTTTAAAACGCAACTAGGACAATCACCTATTTTAAGTCTGTATGCTGAGTATG
TTTCAGTTTTAGTAATTGGAATTGAACTTTTAACTGCTGTACTTTTATGTATCCCCAGATTTAAATTTATAGGTTTGTGG
ATTTCGGCAGCACTGATGATTATGTTCACTACGTATATTTATATAATTTTAAACTTCAGTCCGTTTATTCCCTGTTCGTG
CGGCGGAATTTTAGAAAAACTGAGCTGGCATGAACATCTGCTTTTTAATCTCTTGTTTACAGGATTGGCCTCATTGGCAA
TTCTGCTCAGATCAACTTCAAAACAAACAATAAGATATCTTTTACTTTTAACCATTTTTACGATATCCAGTGTAACTGTC
CTTTTCTTGTTTACTGATGACATAATGAAAAAGGAAAACCCTTTTATACGCCGGCTTCCTAATGCATCAGCTGCAAAAAC
TAAAGAACTTGATGTAAGAAATAATTCCTATTATATAGCTGGAATATATAATAAAAAGATTTATTTAGGAAACCGTTTAG
CTCCTCTTCAGGTATTGGAAGTGGATGAAAATCTAAAGACAAAAAAGAAACACACTATAAAACTCAGCCGTGAAAATTTC
CCGTTTAAAGCATTAGAAGTGAGAGTAAAAGAGAATAGTTTTTATGTCAGTGACGGAACTGTTCCAGTTATATACAAAGG
TCTGATTTCTGACTGGAAGGCTGCTGTTATCATTGAGGGTAAATTTTATTTTTCCCAGATTGTTTTCATGAACGACAAGA
AGATAGCTTTTCGAGCTCAGCAGCCGTCAACAGGAGAGAATATGCTTGGAATTACAGACGAGAAAAGCAGTTTTATAAAC
TTCGAATACCAGGCGCTTCAAAAGCAGCACGACGGTATTTTTGATACAGACGGAACAATCCAGTACAGTGGAGCCTTGAA
TAAATTGGTTTATACGTACTACTATCGAAACCAGTACTTAGTGATGGATACAGATTTAAATGTATTATCTAGAGCAAATA
CAATCGATACTACAAAGAATGCCAAATTAAAAGTGGTAAAATTAGAGCAGTCTGGCGACATAAAACTTGCAGCTCCGCCA
TATATGGTAAACAGGAATACTTCGGTCTGTAATAATCTACTTTTTGTAAACTCAATGCTAAGAGGAAGATATGAGGGGGA
TGATGTATGGAAACATGCCTCGGTTATAGATGTATATGATATGAACCAAAAGACTTATTTATTAAGTTTTTATGTATATG
ACGAAAACAATTTAAGGATGAAAAGCTTTTATGCTTCGGAATCTTCTGTATATATCATCTCTGGACATTATCTGCTGAAA
TATCAGTATGGAAAAAACATGAAGTCAAAGTTTAAATGA

Upstream 100 bases:

>100_bases
TTAAAGGGTTTATGAGAAAATTCGTATCTACATTTGCACTAGATATAAGTTTAGAAATATCATTCTAATAATAGAAGCAG
AGCGTAAAAAATTTGAGGAG

Downstream 100 bases:

>100_bases
TAGATACATTTTAAAAGAATACTAGCGCTGGTAGCAGGAGTAAGATCGAAAACCTGAAGAAAAGAGTAGATCATTTTTTT
AATTTAATTTTTATTATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MNSKNNIKKYIIETVCVLHILLFVYASVSKLLDFENFKTQLGQSPILSLYAEYVSVLVIGIELLTAVLLCIPRFKFIGLW
ISAALMIMFTTYIYIILNFSPFIPCSCGGILEKLSWHEHLLFNLLFTGLASLAILLRSTSKQTIRYLLLLTIFTISSVTV
LFLFTDDIMKKENPFIRRLPNASAAKTKELDVRNNSYYIAGIYNKKIYLGNRLAPLQVLEVDENLKTKKKHTIKLSRENF
PFKALEVRVKENSFYVSDGTVPVIYKGLISDWKAAVIIEGKFYFSQIVFMNDKKIAFRAQQPSTGENMLGITDEKSSFIN
FEYQALQKQHDGIFDTDGTIQYSGALNKLVYTYYYRNQYLVMDTDLNVLSRANTIDTTKNAKLKVVKLEQSGDIKLAAPP
YMVNRNTSVCNNLLFVNSMLRGRYEGDDVWKHASVIDVYDMNQKTYLLSFYVYDENNLRMKSFYASESSVYIISGHYLLK
YQYGKNMKSKFK

Sequences:

>Translated_492_residues
MNSKNNIKKYIIETVCVLHILLFVYASVSKLLDFENFKTQLGQSPILSLYAEYVSVLVIGIELLTAVLLCIPRFKFIGLW
ISAALMIMFTTYIYIILNFSPFIPCSCGGILEKLSWHEHLLFNLLFTGLASLAILLRSTSKQTIRYLLLLTIFTISSVTV
LFLFTDDIMKKENPFIRRLPNASAAKTKELDVRNNSYYIAGIYNKKIYLGNRLAPLQVLEVDENLKTKKKHTIKLSRENF
PFKALEVRVKENSFYVSDGTVPVIYKGLISDWKAAVIIEGKFYFSQIVFMNDKKIAFRAQQPSTGENMLGITDEKSSFIN
FEYQALQKQHDGIFDTDGTIQYSGALNKLVYTYYYRNQYLVMDTDLNVLSRANTIDTTKNAKLKVVKLEQSGDIKLAAPP
YMVNRNTSVCNNLLFVNSMLRGRYEGDDVWKHASVIDVYDMNQKTYLLSFYVYDENNLRMKSFYASESSVYIISGHYLLK
YQYGKNMKSKFK
>Mature_492_residues
MNSKNNIKKYIIETVCVLHILLFVYASVSKLLDFENFKTQLGQSPILSLYAEYVSVLVIGIELLTAVLLCIPRFKFIGLW
ISAALMIMFTTYIYIILNFSPFIPCSCGGILEKLSWHEHLLFNLLFTGLASLAILLRSTSKQTIRYLLLLTIFTISSVTV
LFLFTDDIMKKENPFIRRLPNASAAKTKELDVRNNSYYIAGIYNKKIYLGNRLAPLQVLEVDENLKTKKKHTIKLSRENF
PFKALEVRVKENSFYVSDGTVPVIYKGLISDWKAAVIIEGKFYFSQIVFMNDKKIAFRAQQPSTGENMLGITDEKSSFIN
FEYQALQKQHDGIFDTDGTIQYSGALNKLVYTYYYRNQYLVMDTDLNVLSRANTIDTTKNAKLKVVKLEQSGDIKLAAPP
YMVNRNTSVCNNLLFVNSMLRGRYEGDDVWKHASVIDVYDMNQKTYLLSFYVYDENNLRMKSFYASESSVYIISGHYLLK
YQYGKNMKSKFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56620; Mature: 56620

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKNNIKKYIIETVCVLHILLFVYASVSKLLDFENFKTQLGQSPILSLYAEYVSVLVIG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IELLTAVLLCIPRFKFIGLWISAALMIMFTTYIYIILNFSPFIPCSCGGILEKLSWHEHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHH
LFNLLFTGLASLAILLRSTSKQTIRYLLLLTIFTISSVTVLFLFTDDIMKKENPFIRRLP
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEEEHHHHCCCCCHHHCCC
NASAAKTKELDVRNNSYYIAGIYNKKIYLGNRLAPLQVLEVDENLKTKKKHTIKLSRENF
CCCCCCCEEEEECCCCEEEEEEEECEEEECCCCCCEEEEECCCCCCCCCCEEEEEECCCC
PFKALEVRVKENSFYVSDGTVPVIYKGLISDWKAAVIIEGKFYFSQIVFMNDKKIAFRAQ
CEEEEEEEEECCEEEEECCCHHHHHHHHHCCCCEEEEEECEEEEEEEEEECCCEEEEEEC
QPSTGENMLGITDEKSSFINFEYQALQKQHDGIFDTDGTIQYSGALNKLVYTYYYRNQYL
CCCCCCCCEEEECCCCCEEEHHHHHHHHHCCCCCCCCCCEEECCCHHHEEEEEEECCEEE
VMDTDLNVLSRANTIDTTKNAKLKVVKLEQSGDIKLAAPPYMVNRNTSVCNNLLFVNSML
EEECCHHHHHCCCCCCCCCCCEEEEEEEECCCCEEEECCCEEECCCHHHHHHHHHHHHHH
RGRYEGDDVWKHASVIDVYDMNQKTYLLSFYVYDENNLRMKSFYASESSVYIISGHYLLK
CCCCCCCHHHCCCCEEEEEECCCCEEEEEEEEECCCCEEEEEEECCCCEEEEEECCEEEE
YQYGKNMKSKFK
EECCCCCHHHCC
>Mature Secondary Structure
MNSKNNIKKYIIETVCVLHILLFVYASVSKLLDFENFKTQLGQSPILSLYAEYVSVLVIG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IELLTAVLLCIPRFKFIGLWISAALMIMFTTYIYIILNFSPFIPCSCGGILEKLSWHEHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHH
LFNLLFTGLASLAILLRSTSKQTIRYLLLLTIFTISSVTVLFLFTDDIMKKENPFIRRLP
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEEEHHHHCCCCCHHHCCC
NASAAKTKELDVRNNSYYIAGIYNKKIYLGNRLAPLQVLEVDENLKTKKKHTIKLSRENF
CCCCCCCEEEEECCCCEEEEEEEECEEEECCCCCCEEEEECCCCCCCCCCEEEEEECCCC
PFKALEVRVKENSFYVSDGTVPVIYKGLISDWKAAVIIEGKFYFSQIVFMNDKKIAFRAQ
CEEEEEEEEECCEEEEECCCHHHHHHHHHCCCCEEEEEECEEEEEEEEEECCCEEEEEEC
QPSTGENMLGITDEKSSFINFEYQALQKQHDGIFDTDGTIQYSGALNKLVYTYYYRNQYL
CCCCCCCCEEEECCCCCEEEHHHHHHHHHCCCCCCCCCCEEECCCHHHEEEEEEECCEEE
VMDTDLNVLSRANTIDTTKNAKLKVVKLEQSGDIKLAAPPYMVNRNTSVCNNLLFVNSML
EEECCHHHHHCCCCCCCCCCCEEEEEEEECCCCEEEECCCEEECCCHHHHHHHHHHHHHH
RGRYEGDDVWKHASVIDVYDMNQKTYLLSFYVYDENNLRMKSFYASESSVYIISGHYLLK
CCCCCCCHHHCCCCEEEEEECCCCEEEEEEEEECCCCEEEEEEECCCCEEEEEECCEEEE
YQYGKNMKSKFK
EECCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA