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The map label for this gene is 146302109

Identifier: 146302109

GI number: 146302109

Start: 5279241

End: 5280656

Strand: Direct

Name: 146302109

Synonym: Fjoh_4374

Alternate gene names: NA

Gene position: 5279241-5280656 (Clockwise)

Preceding gene: 146302108

Following gene: 146302110

Centisome position: 86.59

GC content: 41.88

Gene sequence:

>1416_bases
ATGAAAAATATAGAAAATTTAAACATTATTTTCTCAAATATGAGAGGTATTTTCAGCATCAGGTTCTTTTTTATTCTGTT
ATTATCCGCTTCAACAGCCTCATGTGACGGTTTTGTCGAGGTAGATCTTCCTGACTCCCAGCTTACGTCCGAAGCCGTTT
TTGCGGATGCATCTTCAGCTGGAGCTGCACTTGCAGGCCTGTATGCAAAACTTAGAAGCACAGGAATGCTTAACGGCAGT
TCAACCGGAATATCCTGCTATCTTGGACTGTATACCGATGAACTCGATTATTATCAGCAGACAGCCGTGAGCAATTTTTA
TAATAACAGCCTTTTTGCCACAGATTATCAGGTTAATGCGCTTTGGAACCAAAGCTTCAACCAGATATATACCGCTAATG
CTCTCATTGATGGACTGAATAAATCTGAAACGGTGCCTTCAGTTGCTAAAAAACAGATCATGGGAGAAGCACTGTTTATT
AGAGGGTTGCTTCATTTTACCATGGCCAATCTTTTTGGAGATCTGCCCTACATAACATCTACTGATTATAAATTAAACAG
CAGAGCCATCAAAATGCCTGTATACAGGATTTATGAAAACTGCATAAACGACTTAGAAATGGCTTCTGATATGATATCAG
AGACTTATCCAGCAGCTGAAAGAATCCGTCCAAACCGAAGTACTGTAAAAGCCCTAATGGCAAGAGTCTATCTGTACATG
AAACTCTACCCTGAAGCTTCTGACGCAGCTTCAGCGGTAATAAACAATTCTCTTTATAAACAAGAAATTAATCTGGACAG
GATTTTTCTGAAAGGATCCACTACAACTATCTTGCAATTTATGCCGTCGGCTTCTGGAGCAAATACCAGTGAAGGCAGCC
TGTATATATTTAGATCGGGACCTCCACCACTGGTCGCCTTACGGTCAGATTTTGTAGATGCTTTCGAACCGGGAGATAAA
AGGAAAGCGCAGTGGACGGCCAAAATTACAAATGGCATCTCCAACTGGTACTACGCTTCAAAATACAAACAGGATTTAAG
CACCTCAGCTTCCTTGGAATACTCTGTGATCTTTCGTCTTGCTGAGCAGTATCTGATCCGTGCCGAAGCAAGGGCTTATC
AGGGAGATATAATAGGAGCCAAAGAAGACCTCAACGTTATCAGAAACACTGCAGGGCTTTCAGATACACCTGCTTTAACA
GCCCAAGAAATTATTGCAGATGTTCAAAGCCAGCGCCGCTTTGAGCTCTTCACCGAATTCGGACAGCGTTTTTTTGATCT
TAAGCGAACCGAAAGACTTGACCAGACACTGTCAGTCGTAAAACCCGGATGGAATACTGATGATAAGCTTTTGCCCCTGC
CGGAAGTTGAGCTCAATTCAAATCCAAACTTAAAGCCTCAGAACCCTGGATATTAA

Upstream 100 bases:

>100_bases
AAGGTGGAGATCCAGAATTTAAATATACCGCATACCTGCCTCCATTAAAAGTTCTCACAGCCGGAATCGAACTGACATTT
TAATCTTCAAAATAAACGCA

Downstream 100 bases:

>100_bases
ACTTATAGAATCAATTGTGAGAAATATTTTTAGAATTTTAATTTTGAATTTGGTGATTTTGCTGCCTTTCTGTCCCCTAA
TGGGACAGGAGCGGCAAAAG

Product: RagB/SusD domain-containing protein

Products: NA

Alternate protein names: Outer Membrane Protein; RagB/SusD Domain-Containing Protein; SusD/RagB Family Protein; Ragb/Susd Domain Protein; Lipoprotein; Outer Membrane Receptor Protein; Tetratricopeptide Repeat Protein; Tetratricopeptide Domain Protein

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MKNIENLNIIFSNMRGIFSIRFFFILLLSASTASCDGFVEVDLPDSQLTSEAVFADASSAGAALAGLYAKLRSTGMLNGS
STGISCYLGLYTDELDYYQQTAVSNFYNNSLFATDYQVNALWNQSFNQIYTANALIDGLNKSETVPSVAKKQIMGEALFI
RGLLHFTMANLFGDLPYITSTDYKLNSRAIKMPVYRIYENCINDLEMASDMISETYPAAERIRPNRSTVKALMARVYLYM
KLYPEASDAASAVINNSLYKQEINLDRIFLKGSTTTILQFMPSASGANTSEGSLYIFRSGPPPLVALRSDFVDAFEPGDK
RKAQWTAKITNGISNWYYASKYKQDLSTSASLEYSVIFRLAEQYLIRAEARAYQGDIIGAKEDLNVIRNTAGLSDTPALT
AQEIIADVQSQRRFELFTEFGQRFFDLKRTERLDQTLSVVKPGWNTDDKLLPLPEVELNSNPNLKPQNPGY

Sequences:

>Translated_471_residues
MKNIENLNIIFSNMRGIFSIRFFFILLLSASTASCDGFVEVDLPDSQLTSEAVFADASSAGAALAGLYAKLRSTGMLNGS
STGISCYLGLYTDELDYYQQTAVSNFYNNSLFATDYQVNALWNQSFNQIYTANALIDGLNKSETVPSVAKKQIMGEALFI
RGLLHFTMANLFGDLPYITSTDYKLNSRAIKMPVYRIYENCINDLEMASDMISETYPAAERIRPNRSTVKALMARVYLYM
KLYPEASDAASAVINNSLYKQEINLDRIFLKGSTTTILQFMPSASGANTSEGSLYIFRSGPPPLVALRSDFVDAFEPGDK
RKAQWTAKITNGISNWYYASKYKQDLSTSASLEYSVIFRLAEQYLIRAEARAYQGDIIGAKEDLNVIRNTAGLSDTPALT
AQEIIADVQSQRRFELFTEFGQRFFDLKRTERLDQTLSVVKPGWNTDDKLLPLPEVELNSNPNLKPQNPGY
>Mature_471_residues
MKNIENLNIIFSNMRGIFSIRFFFILLLSASTASCDGFVEVDLPDSQLTSEAVFADASSAGAALAGLYAKLRSTGMLNGS
STGISCYLGLYTDELDYYQQTAVSNFYNNSLFATDYQVNALWNQSFNQIYTANALIDGLNKSETVPSVAKKQIMGEALFI
RGLLHFTMANLFGDLPYITSTDYKLNSRAIKMPVYRIYENCINDLEMASDMISETYPAAERIRPNRSTVKALMARVYLYM
KLYPEASDAASAVINNSLYKQEINLDRIFLKGSTTTILQFMPSASGANTSEGSLYIFRSGPPPLVALRSDFVDAFEPGDK
RKAQWTAKITNGISNWYYASKYKQDLSTSASLEYSVIFRLAEQYLIRAEARAYQGDIIGAKEDLNVIRNTAGLSDTPALT
AQEIIADVQSQRRFELFTEFGQRFFDLKRTERLDQTLSVVKPGWNTDDKLLPLPEVELNSNPNLKPQNPGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52649; Mature: 52649

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIENLNIIFSNMRGIFSIRFFFILLLSASTASCDGFVEVDLPDSQLTSEAVFADASSA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHCCCCCC
GAALAGLYAKLRSTGMLNGSSTGISCYLGLYTDELDYYQQTAVSNFYNNSLFATDYQVNA
HHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHCCCEEEECEEEEE
LWNQSFNQIYTANALIDGLNKSETVPSVAKKQIMGEALFIRGLLHFTMANLFGDLPYITS
HHHCCHHHEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TDYKLNSRAIKMPVYRIYENCINDLEMASDMISETYPAAERIRPNRSTVKALMARVYLYM
CCCEECCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHH
KLYPEASDAASAVINNSLYKQEINLDRIFLKGSTTTILQFMPSASGANTSEGSLYIFRSG
HCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEHHCCCCCCCCCCCCCEEEEEECC
PPPLVALRSDFVDAFEPGDKRKAQWTAKITNGISNWYYASKYKQDLSTSASLEYSVIFRL
CCCEEEEHHHHHHHCCCCCCCHHHHHHHHHHCHHHCCHHHHHHHHCCCCCCCHHHHHHHH
AEQYLIRAEARAYQGDIIGAKEDLNVIRNTAGLSDTPALTAQEIIADVQSQRRFELFTEF
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GQRFFDLKRTERLDQTLSVVKPGWNTDDKLLPLPEVELNSNPNLKPQNPGY
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
>Mature Secondary Structure
MKNIENLNIIFSNMRGIFSIRFFFILLLSASTASCDGFVEVDLPDSQLTSEAVFADASSA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHCCCCCC
GAALAGLYAKLRSTGMLNGSSTGISCYLGLYTDELDYYQQTAVSNFYNNSLFATDYQVNA
HHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHCCCEEEECEEEEE
LWNQSFNQIYTANALIDGLNKSETVPSVAKKQIMGEALFIRGLLHFTMANLFGDLPYITS
HHHCCHHHEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TDYKLNSRAIKMPVYRIYENCINDLEMASDMISETYPAAERIRPNRSTVKALMARVYLYM
CCCEECCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHH
KLYPEASDAASAVINNSLYKQEINLDRIFLKGSTTTILQFMPSASGANTSEGSLYIFRSG
HCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEHHCCCCCCCCCCCCCEEEEEECC
PPPLVALRSDFVDAFEPGDKRKAQWTAKITNGISNWYYASKYKQDLSTSASLEYSVIFRL
CCCEEEEHHHHHHHCCCCCCCHHHHHHHHHHCHHHCCHHHHHHHHCCCCCCCHHHHHHHH
AEQYLIRAEARAYQGDIIGAKEDLNVIRNTAGLSDTPALTAQEIIADVQSQRRFELFTEF
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GQRFFDLKRTERLDQTLSVVKPGWNTDDKLLPLPEVELNSNPNLKPQNPGY
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA