| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302096
Identifier: 146302096
GI number: 146302096
Start: 5263869
End: 5265062
Strand: Reverse
Name: 146302096
Synonym: Fjoh_4361
Alternate gene names: NA
Gene position: 5265062-5263869 (Counterclockwise)
Preceding gene: 146302097
Following gene: 146302095
Centisome position: 86.36
GC content: 33.0
Gene sequence:
>1194_bases ATGATTAAAATGTATCCTTTGGAATGGTTTGATTCGTTGATTATAAATTCATTTGATGCTGATAATTCTTCTTTAAAAGT ATCGGAATATGAATTGGAGAGTTTGAGAAAAACAATAGTATCTGAATCAAAAAAAATTAAAATTCATATTAAAGATTCTT TTTTCGAACTGAAAAGTAAAAGGCAGATTAGACTTCTTATAAGAAAATATCATTCTTCATTGGTTTTTTTAATAGACAGG GTAGTAGAAATAAGAAAGATCGAAAAATTCAATTCTCCTGAATTTTTTAGAATATTTGACCTGATCGTTAGTTCGCTGGA TGATTTGCTGTCATTTGTAGAAATCAGATATTCGTCCTTTATGAGTTTGGATCAAAGGGTGTCCTACAGCTATTTTTCAA TTTGGAAAAAAGAAGCACTCGAGGTTTTAAAGAATCTGATTAAAAAAAAAGAAAATACCGGGGAGAATGATCTCGAATTG GAGTTTGTTGTCGATCTTCTTGCGGCGCCACTTCAAAACAGCATAAAGAGCAAGTATACCTATCGCCAGATTTTGTATTA TAGGGAGATAATCATGGAACTTGAAAAATTAAACGATCAAGTTACGGAATCTGAAGGTTTTTCAAATCTGGATCTTGTGC TTATAAGAATGAATTTTAATTCCAGAGAATATACCGAGAGACTGGTTAATAGAATAGGCAGGTATTTAGAAGGTTTTGAG AATTTATCTGAAAGACTTGAAAAGCTGCTGTACTTCTGCAAGAAACTGTCTAAAATAAACGCAGATTTAAAATTAACCTT TAATCCATCTCAACAGAATCTTATCTCATTTTTGGAATACTGGTTCTCCAGCGAAATCAGATTTGCTGAAAAAAAGGCCG CAATTCTAATGCAGGAACAGATTGATGCTTCTGTCGGAAGTGAATTTGTAGAGCAGGCAGATTCAAAACTTGAATGTATA CTTTCAGGAGATCAGATTGGACTTATTTTAAGGGCGACAGATGAGGCGAGAATTATTAAGGCCAAGTCTATGAACTACAT ATTTAAAAGTATTGTGCCTTATCTCTCTACTCCAGTAAAGAGAAATCTTTCGTACCAGTCAGTGAGAAGCAAATCATATA ATGCGGAAGAGCGTGATAAGGAAATTGCGATTGAAAGTCTTGAGAAAATAATCCGTAAGATAAAAACGTATTAG
Upstream 100 bases:
>100_bases ATACCGGTATGCTGCCAACCGAATTTCGTTCTAATAAAAAATAAACTGCCAACACAGCTCCTTATTCTGCCAGAGATTGT TTAATTAAAACGATAAGACG
Downstream 100 bases:
>100_bases ATTTGATTGTCGTGTATAATCTGACAACCCTTCAAATTCGGGCATTTTGAAAGGGTACAAGAAGGGTACAGAAAAGTTGT ACTTGTAGAAAATTTATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MIKMYPLEWFDSLIINSFDADNSSLKVSEYELESLRKTIVSESKKIKIHIKDSFFELKSKRQIRLLIRKYHSSLVFLIDR VVEIRKIEKFNSPEFFRIFDLIVSSLDDLLSFVEIRYSSFMSLDQRVSYSYFSIWKKEALEVLKNLIKKKENTGENDLEL EFVVDLLAAPLQNSIKSKYTYRQILYYREIIMELEKLNDQVTESEGFSNLDLVLIRMNFNSREYTERLVNRIGRYLEGFE NLSERLEKLLYFCKKLSKINADLKLTFNPSQQNLISFLEYWFSSEIRFAEKKAAILMQEQIDASVGSEFVEQADSKLECI LSGDQIGLILRATDEARIIKAKSMNYIFKSIVPYLSTPVKRNLSYQSVRSKSYNAEERDKEIAIESLEKIIRKIKTY
Sequences:
>Translated_397_residues MIKMYPLEWFDSLIINSFDADNSSLKVSEYELESLRKTIVSESKKIKIHIKDSFFELKSKRQIRLLIRKYHSSLVFLIDR VVEIRKIEKFNSPEFFRIFDLIVSSLDDLLSFVEIRYSSFMSLDQRVSYSYFSIWKKEALEVLKNLIKKKENTGENDLEL EFVVDLLAAPLQNSIKSKYTYRQILYYREIIMELEKLNDQVTESEGFSNLDLVLIRMNFNSREYTERLVNRIGRYLEGFE NLSERLEKLLYFCKKLSKINADLKLTFNPSQQNLISFLEYWFSSEIRFAEKKAAILMQEQIDASVGSEFVEQADSKLECI LSGDQIGLILRATDEARIIKAKSMNYIFKSIVPYLSTPVKRNLSYQSVRSKSYNAEERDKEIAIESLEKIIRKIKTY >Mature_397_residues MIKMYPLEWFDSLIINSFDADNSSLKVSEYELESLRKTIVSESKKIKIHIKDSFFELKSKRQIRLLIRKYHSSLVFLIDR VVEIRKIEKFNSPEFFRIFDLIVSSLDDLLSFVEIRYSSFMSLDQRVSYSYFSIWKKEALEVLKNLIKKKENTGENDLEL EFVVDLLAAPLQNSIKSKYTYRQILYYREIIMELEKLNDQVTESEGFSNLDLVLIRMNFNSREYTERLVNRIGRYLEGFE NLSERLEKLLYFCKKLSKINADLKLTFNPSQQNLISFLEYWFSSEIRFAEKKAAILMQEQIDASVGSEFVEQADSKLECI LSGDQIGLILRATDEARIIKAKSMNYIFKSIVPYLSTPVKRNLSYQSVRSKSYNAEERDKEIAIESLEKIIRKIKTY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46856; Mature: 46856
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKMYPLEWFDSLIINSFDADNSSLKVSEYELESLRKTIVSESKKIKIHIKDSFFELKSK CCEECCHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHH RQIRLLIRKYHSSLVFLIDRVVEIRKIEKFNSPEFFRIFDLIVSSLDDLLSFVEIRYSSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MSLDQRVSYSYFSIWKKEALEVLKNLIKKKENTGENDLELEFVVDLLAAPLQNSIKSKYT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH YRQILYYREIIMELEKLNDQVTESEGFSNLDLVLIRMNFNSREYTERLVNRIGRYLEGFE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH NLSERLEKLLYFCKKLSKINADLKLTFNPSQQNLISFLEYWFSSEIRFAEKKAAILMQEQ HHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH IDASVGSEFVEQADSKLECILSGDQIGLILRATDEARIIKAKSMNYIFKSIVPYLSTPVK HHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHH RNLSYQSVRSKSYNAEERDKEIAIESLEKIIRKIKTY HCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIKMYPLEWFDSLIINSFDADNSSLKVSEYELESLRKTIVSESKKIKIHIKDSFFELKSK CCEECCHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHH RQIRLLIRKYHSSLVFLIDRVVEIRKIEKFNSPEFFRIFDLIVSSLDDLLSFVEIRYSSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MSLDQRVSYSYFSIWKKEALEVLKNLIKKKENTGENDLELEFVVDLLAAPLQNSIKSKYT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH YRQILYYREIIMELEKLNDQVTESEGFSNLDLVLIRMNFNSREYTERLVNRIGRYLEGFE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH NLSERLEKLLYFCKKLSKINADLKLTFNPSQQNLISFLEYWFSSEIRFAEKKAAILMQEQ HHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH IDASVGSEFVEQADSKLECILSGDQIGLILRATDEARIIKAKSMNYIFKSIVPYLSTPVK HHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHH RNLSYQSVRSKSYNAEERDKEIAIESLEKIIRKIKTY HCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA