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The map label for this gene is traC [C]

Identifier: 146302092

GI number: 146302092

Start: 5259914

End: 5262373

Strand: Reverse

Name: traC [C]

Synonym: Fjoh_4357

Alternate gene names: 146302092

Gene position: 5262373-5259914 (Counterclockwise)

Preceding gene: 146302093

Following gene: 146302091

Centisome position: 86.31

GC content: 41.5

Gene sequence:

>2460_bases
ATGGAAGAGCAGCTGCCGGTTATGGCAGTGGAGCATGATTGTATTTTATCAAAACAGGGCGATGTAACTATAGTTTTTAA
GGCAGAACTGCCTGAAATTTTTACGCTGTCAGACCAGGAGTATGAAGCTTTCCACCAGTTATGGATAAAGGCGTTAAAGG
TGCTGCCGAAGTTTTGTGTTTTTCATAAACAGGACTGGTTCTTAGAAAATGCTTATAGAGCTGATTTTTCAAGTGAAGAC
AGCAGTTTTCTGACCAGAAGCAGCGAGCGTTTCTTTAACGAAAGACCATTTCTGGATCATTCCTGCTATATCATGCTGAC
CAAGAAACCGGCGGGAAGAAGAAATGCAACCTCATTGTTTTCTAATCTGCTTAGAAGTTCCATAGTTCCAGAGGAAACCT
TAAAACCGCAGCTTCTGCAGGATTTTGCAGATACCTGCGGCCAGTTTAAGAGAATTATGGAAGACAGCGGATTTATAAAG
CTGGAGCGTCTGCAAAATGAATCGCTTAGAAGCGAGAGCAGAAGAATCGGGCTGGTGGAAAAGTACTGTTTTTTATCAGA
GCGGGAAGATTCATTCGTTTTTAAGGATATAAGGTTTGATGAAGGATTAGCAGTAGGGGATAAACACTGCCAATTGTTTA
CACTTGGTGATGCAGCTGATCTGCCTGGATTATGCGGATCGAGAATCAATTTTGACCGCTATTCAACCGATAAAACCAAA
TTCAGCGTTGGTTTTGCTTCAACCCTCGGGCAGCTTTTATCCTGTAATCATATTTACAATCAGTATATCTTCATTGAGGA
TTCACAGAAAACCATTCAGAAGCTGGAAAGCAAGCGACTCAGACTGCAGTCACTCTCTGCCTACAGCCGGGAGAATATGA
TTGCCAGGGATGCGACGAATGATTTTCTGAACGAGGCATTATCACAGCAGAGGCTTCCGGTTAAAGCCCATTTTAATGTA
CTGGCCTGGAGCACGGATATGGAAGACTTGAAAGAGATTAAAAACAAAGTGTCATCAGCTCTTGCCCAGATGGATGCAGC
AGCGAAGCATGAAACAGTAGGAGCTCCTCAGATCTATTGGGCTGGAATGGCGGGAAATGCAGCGGACTTTCCCATGAATG
ACACCTTCGACACCTTTACCGAACAGGCGGTATGCTTTCTGAATATGGAAACGGGATATAAATCTTCGCTGAGTCCCTGC
GGTATCAGGCTGGGAGACAGGCTGACAGGAAAACCAGTTCATGTTGATATCAGCGATGAGCCTGTTAAGATGGGAATCTG
CACCAATCGCAATAAGTTTATATTGGGACCTTCGGGCAGCGGCAAGTCCTTTTTTACCAATCATATGGTGAGAAGCTATT
ACGAGCAGGGAACGCATATTGTGCTGGTGGATGTCGGGCACAGCTATAAAGGGCTCTGCGATATGGTAAACGGTTATTAT
TTTACTTACGATGAAAAGAATCCTATCCGTTTTAACCCATTTTATATTTCAGAAGGAGACAGTCTGGATACGGAGAAAAA
AGAGAGCATTAAAACGCTTCTGCTCGCACTCTGGAAAAAAGACGACGAAACCTTTAACCGGAGCGAGTATGTAGCACTCT
CAAATGCGCTGCAGCTGTATTACGAGAAATTGGATGTTAACACAAATATATTTCCCTGTTTCAATAGCTTCTATGATTTT
CTGAAAGAGGATTTTATCTCAATTTTGGAAGGCGATAAAGTAAAGGAGAAGGACTTTGACGTGAATAATTTTCTCTATGT
GCTTAGGCCTTATTACAAGGGAGGCGAGTTTGATTATCTGTTGAACGCGACAGAAAATCTGGATCTTCTAAAAGAAAGGT
TTATTGTCTTCGAGCTGGATAATATCAAAGACCATCCGATTCTTTTTCCAGTAGTGACCATCATAATAATGGAAGTTTTT
ATAAACAAGATGAGAAAACTTAAGGGTATCCGAAAAATGATACTTATTGAGGAAGCATGGAAAGCCATAGCAAAAGAAGG
GATGGCCGATTATATAAAATATTTATTTAAGACTGTGCGTAAATTCTTCGGGGAAGCAATAGTGGTAACTCAGGAGGTTG
AGGATATTATTTCTTCACCTGTTGTAAAACAGGCTATTATCAATAATAGCGACTGCAAGATTCTTCTGGACCAGAGCAAA
TATCAGAATAAGTTTGACCAGATTCAGGAGCTGTTGGGACTTACAGACAAAGAAAAGGCACTTGTACTTTCTGTAAATAA
AGCCAATGATCCAGCCAGGAAATACAAAGAAGTGTTTATCTCTCTGGGAGGGATGCTTTCAAAGGTCTATAGAACCGAAG
TTTCGCTGGAGGAATACTTAGCTTATACAACAGAGGAAAGCGAGAAAGTGAAAATGAATGCCTATGCGAAGAAGTTTGGC
GGGGACATAAAGAAAGGAATAGCCGCAATGGCTCAGGATATGAGAAATGGAATTAAATAA

Upstream 100 bases:

>100_bases
AACAGATCCCTAAGTGGATTAAAGTTTACAGCAGATCAGTTTTTATGAAGTTATAGCTACAGAACGTTAATGATATAATG
TAGAAAGGATGGAGAAGAGG

Downstream 100 bases:

>100_bases
AAAGGAATAATGAAAAAGAAATTAATAGTCGTGATGGTCTGCCTGCTGCTAGTGGGCACCTCGGCAAGACCTGCGGAAAA
AGTTGCGGTATTGCCGATAC

Product: Type IV secretory pathway VirB4 components-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 819; Mature: 819

Protein sequence:

>819_residues
MEEQLPVMAVEHDCILSKQGDVTIVFKAELPEIFTLSDQEYEAFHQLWIKALKVLPKFCVFHKQDWFLENAYRADFSSED
SSFLTRSSERFFNERPFLDHSCYIMLTKKPAGRRNATSLFSNLLRSSIVPEETLKPQLLQDFADTCGQFKRIMEDSGFIK
LERLQNESLRSESRRIGLVEKYCFLSEREDSFVFKDIRFDEGLAVGDKHCQLFTLGDAADLPGLCGSRINFDRYSTDKTK
FSVGFASTLGQLLSCNHIYNQYIFIEDSQKTIQKLESKRLRLQSLSAYSRENMIARDATNDFLNEALSQQRLPVKAHFNV
LAWSTDMEDLKEIKNKVSSALAQMDAAAKHETVGAPQIYWAGMAGNAADFPMNDTFDTFTEQAVCFLNMETGYKSSLSPC
GIRLGDRLTGKPVHVDISDEPVKMGICTNRNKFILGPSGSGKSFFTNHMVRSYYEQGTHIVLVDVGHSYKGLCDMVNGYY
FTYDEKNPIRFNPFYISEGDSLDTEKKESIKTLLLALWKKDDETFNRSEYVALSNALQLYYEKLDVNTNIFPCFNSFYDF
LKEDFISILEGDKVKEKDFDVNNFLYVLRPYYKGGEFDYLLNATENLDLLKERFIVFELDNIKDHPILFPVVTIIIMEVF
INKMRKLKGIRKMILIEEAWKAIAKEGMADYIKYLFKTVRKFFGEAIVVTQEVEDIISSPVVKQAIINNSDCKILLDQSK
YQNKFDQIQELLGLTDKEKALVLSVNKANDPARKYKEVFISLGGMLSKVYRTEVSLEEYLAYTTEESEKVKMNAYAKKFG
GDIKKGIAAMAQDMRNGIK

Sequences:

>Translated_819_residues
MEEQLPVMAVEHDCILSKQGDVTIVFKAELPEIFTLSDQEYEAFHQLWIKALKVLPKFCVFHKQDWFLENAYRADFSSED
SSFLTRSSERFFNERPFLDHSCYIMLTKKPAGRRNATSLFSNLLRSSIVPEETLKPQLLQDFADTCGQFKRIMEDSGFIK
LERLQNESLRSESRRIGLVEKYCFLSEREDSFVFKDIRFDEGLAVGDKHCQLFTLGDAADLPGLCGSRINFDRYSTDKTK
FSVGFASTLGQLLSCNHIYNQYIFIEDSQKTIQKLESKRLRLQSLSAYSRENMIARDATNDFLNEALSQQRLPVKAHFNV
LAWSTDMEDLKEIKNKVSSALAQMDAAAKHETVGAPQIYWAGMAGNAADFPMNDTFDTFTEQAVCFLNMETGYKSSLSPC
GIRLGDRLTGKPVHVDISDEPVKMGICTNRNKFILGPSGSGKSFFTNHMVRSYYEQGTHIVLVDVGHSYKGLCDMVNGYY
FTYDEKNPIRFNPFYISEGDSLDTEKKESIKTLLLALWKKDDETFNRSEYVALSNALQLYYEKLDVNTNIFPCFNSFYDF
LKEDFISILEGDKVKEKDFDVNNFLYVLRPYYKGGEFDYLLNATENLDLLKERFIVFELDNIKDHPILFPVVTIIIMEVF
INKMRKLKGIRKMILIEEAWKAIAKEGMADYIKYLFKTVRKFFGEAIVVTQEVEDIISSPVVKQAIINNSDCKILLDQSK
YQNKFDQIQELLGLTDKEKALVLSVNKANDPARKYKEVFISLGGMLSKVYRTEVSLEEYLAYTTEESEKVKMNAYAKKFG
GDIKKGIAAMAQDMRNGIK
>Mature_819_residues
MEEQLPVMAVEHDCILSKQGDVTIVFKAELPEIFTLSDQEYEAFHQLWIKALKVLPKFCVFHKQDWFLENAYRADFSSED
SSFLTRSSERFFNERPFLDHSCYIMLTKKPAGRRNATSLFSNLLRSSIVPEETLKPQLLQDFADTCGQFKRIMEDSGFIK
LERLQNESLRSESRRIGLVEKYCFLSEREDSFVFKDIRFDEGLAVGDKHCQLFTLGDAADLPGLCGSRINFDRYSTDKTK
FSVGFASTLGQLLSCNHIYNQYIFIEDSQKTIQKLESKRLRLQSLSAYSRENMIARDATNDFLNEALSQQRLPVKAHFNV
LAWSTDMEDLKEIKNKVSSALAQMDAAAKHETVGAPQIYWAGMAGNAADFPMNDTFDTFTEQAVCFLNMETGYKSSLSPC
GIRLGDRLTGKPVHVDISDEPVKMGICTNRNKFILGPSGSGKSFFTNHMVRSYYEQGTHIVLVDVGHSYKGLCDMVNGYY
FTYDEKNPIRFNPFYISEGDSLDTEKKESIKTLLLALWKKDDETFNRSEYVALSNALQLYYEKLDVNTNIFPCFNSFYDF
LKEDFISILEGDKVKEKDFDVNNFLYVLRPYYKGGEFDYLLNATENLDLLKERFIVFELDNIKDHPILFPVVTIIIMEVF
INKMRKLKGIRKMILIEEAWKAIAKEGMADYIKYLFKTVRKFFGEAIVVTQEVEDIISSPVVKQAIINNSDCKILLDQSK
YQNKFDQIQELLGLTDKEKALVLSVNKANDPARKYKEVFISLGGMLSKVYRTEVSLEEYLAYTTEESEKVKMNAYAKKFG
GDIKKGIAAMAQDMRNGIK

Specific function: Required For The Assembly Of Mature F-Pilin Subunits Into Extended F Pili. [C]

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 94024; Mature: 94024

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEQLPVMAVEHDCILSKQGDVTIVFKAELPEIFTLSDQEYEAFHQLWIKALKVLPKFCV
CCCCCCEEEEECCEEEECCCCEEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH
FHKQDWFLENAYRADFSSEDSSFLTRSSERFFNERPFLDHSCYIMLTKKPAGRRNATSLF
HCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHH
SNLLRSSIVPEETLKPQLLQDFADTCGQFKRIMEDSGFIKLERLQNESLRSESRRIGLVE
HHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCHHHHHHHHHCCHHH
KYCFLSEREDSFVFKDIRFDEGLAVGDKHCQLFTLGDAADLPGLCGSRINFDRYSTDKTK
HHHHHCCCCCCEEEEEEECCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCE
FSVGFASTLGQLLSCNHIYNQYIFIEDSQKTIQKLESKRLRLQSLSAYSRENMIARDATN
EEECHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
DFLNEALSQQRLPVKAHFNVLAWSTDMEDLKEIKNKVSSALAQMDAAAKHETVGAPQIYW
HHHHHHHHHCCCCEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
AGMAGNAADFPMNDTFDTFTEQAVCFLNMETGYKSSLSPCGIRLGDRLTGKPVHVDISDE
ECCCCCCCCCCCCCCHHHHHCCEEEEEEECCCCCCCCCCCCEECCCCCCCCEEEEECCCC
PVKMGICTNRNKFILGPSGSGKSFFTNHMVRSYYEQGTHIVLVDVGHSYKGLCDMVNGYY
CEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCEE
FTYDEKNPIRFNPFYISEGDSLDTEKKESIKTLLLALWKKDDETFNRSEYVALSNALQLY
EEECCCCCEEECCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
YEKLDVNTNIFPCFNSFYDFLKEDFISILEGDKVKEKDFDVNNFLYVLRPYYKGGEFDYL
HHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHCCCCCEEEE
LNATENLDLLKERFIVFELDNIKDHPILFPVVTIIIMEVFINKMRKLKGIRKMILIEEAW
ECCCCCHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAIAKEGMADYIKYLFKTVRKFFGEAIVVTQEVEDIISSPVVKQAIINNSDCKILLDQSK
HHHHHCCHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHCCHHHHHHHHCCCCCEEEECCHH
YQNKFDQIQELLGLTDKEKALVLSVNKANDPARKYKEVFISLGGMLSKVYRTEVSLEEYL
HHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AYTTEESEKVKMNAYAKKFGGDIKKGIAAMAQDMRNGIK
HHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEEQLPVMAVEHDCILSKQGDVTIVFKAELPEIFTLSDQEYEAFHQLWIKALKVLPKFCV
CCCCCCEEEEECCEEEECCCCEEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH
FHKQDWFLENAYRADFSSEDSSFLTRSSERFFNERPFLDHSCYIMLTKKPAGRRNATSLF
HCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHH
SNLLRSSIVPEETLKPQLLQDFADTCGQFKRIMEDSGFIKLERLQNESLRSESRRIGLVE
HHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCHHHHHHHHHCCHHH
KYCFLSEREDSFVFKDIRFDEGLAVGDKHCQLFTLGDAADLPGLCGSRINFDRYSTDKTK
HHHHHCCCCCCEEEEEEECCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCE
FSVGFASTLGQLLSCNHIYNQYIFIEDSQKTIQKLESKRLRLQSLSAYSRENMIARDATN
EEECHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
DFLNEALSQQRLPVKAHFNVLAWSTDMEDLKEIKNKVSSALAQMDAAAKHETVGAPQIYW
HHHHHHHHHCCCCEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
AGMAGNAADFPMNDTFDTFTEQAVCFLNMETGYKSSLSPCGIRLGDRLTGKPVHVDISDE
ECCCCCCCCCCCCCCHHHHHCCEEEEEEECCCCCCCCCCCCEECCCCCCCCEEEEECCCC
PVKMGICTNRNKFILGPSGSGKSFFTNHMVRSYYEQGTHIVLVDVGHSYKGLCDMVNGYY
CEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCEE
FTYDEKNPIRFNPFYISEGDSLDTEKKESIKTLLLALWKKDDETFNRSEYVALSNALQLY
EEECCCCCEEECCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
YEKLDVNTNIFPCFNSFYDFLKEDFISILEGDKVKEKDFDVNNFLYVLRPYYKGGEFDYL
HHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHCCCCCEEEE
LNATENLDLLKERFIVFELDNIKDHPILFPVVTIIIMEVFINKMRKLKGIRKMILIEEAW
ECCCCCHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAIAKEGMADYIKYLFKTVRKFFGEAIVVTQEVEDIISSPVVKQAIINNSDCKILLDQSK
HHHHHCCHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHCCHHHHHHHHCCCCCEEEECCHH
YQNKFDQIQELLGLTDKEKALVLSVNKANDPARKYKEVFISLGGMLSKVYRTEVSLEEYL
HHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AYTTEESEKVKMNAYAKKFGGDIKKGIAAMAQDMRNGIK
HHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA