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The map label for this gene is 146302080

Identifier: 146302080

GI number: 146302080

Start: 5248791

End: 5250098

Strand: Direct

Name: 146302080

Synonym: Fjoh_4345

Alternate gene names: NA

Gene position: 5248791-5250098 (Clockwise)

Preceding gene: 146302079

Following gene: 146302099

Centisome position: 86.09

GC content: 39.22

Gene sequence:

>1308_bases
ATGTTGGAAAGCAGTTTTGGTTTGGGATTCTTTTTAAAAAGACCCAAAATAGAAAGTAAAGAATGGATCGTGTATTTCAG
AATAACTGTTGACGGTATCCGTAAGGAAAGCTCAACTAAGAGAAGATGGGATAATACACGATGGGATCAAAGGTTCGAAA
GAGCGGTCGGCTCAAAGGAAGATGCAAAGTCGCTGAACTTCTTTTTAGATTCGCTGACTTTAAAAATCAATGAAATCAAA
ACCGAAATGATGTACAGCGGCAAAACCATAACCGCTGAGAAAATTATGGACGGGGTTCTGGGAAAGACAGCGCCAAAGAT
TAAGGTGCTCGAAGAATTTCAAAAGCATAATGATGAAATGGAGGCGCTTCTTGGAAAAGGCTATGCAAAAGGCACCCTTG
ACCGGTTTACCATTACTAAAAACCATTTGACTGCGTTTATAAAATTCAAGCTTAAAAAGCACGATCTTGAATTTGCGGAT
TTGAATCTTGAGTTTGTAAAGGACTTCGAATTTTACCTTAGAACTGTACGCGACTGCAGCAACAACACAACCCTAAAGTA
TATTGCAAATTTCAAAAAGATTGTAATCCGCGCCATTGATAAGGAGTTAATCACCAAGGACCCATTTAAGAACTTTAAGG
GACGTAAAACAAAACTGGTAAAAAAACCACTCACCGCACAGGAATTGTACGAACTTGAAAGTCATTATTTCACAACTGAC
AGGCTCAATGTCGTAAGGGATGTATTTGTCTTCCAATGCTACACTGGTCTGGCTTACATAGACGCTTATCAATTAAAGAA
AACTGATATCAAAGAAGGCATTGATGGAAATCTATGGATTATGTCCGAAAGGCAGAAAACAAACTCATCATTTAATGTCC
CTCTTCTTCCCCAAGCACTGAAAATAGTTGAAAAATATAAAGAGCACCCGCTGTGTATCCAGCGTGGAACCGTGCTTCCT
GTTTCATCCAACCAGAAAATGAATGAGTATCTAAAAGAGGTGGCAGTCTTATGCGGCTTTCCTTTTACATTAAACACGCA
TATGGCACGCCGTACTTTTGGAAGCACTGTGACATTAAATAACAACGTCCCTATTAATGTAGTTAAAGAACTGCTGGGTC
ATGCATCGGTAAAACAGACTGAGGCATATGCTATAACTGAGCAGGCCACAATCGGACGTGAAATGTCTATTCTCAATAAA
AAACTCAATAAAACTGGGTCCAAAATGTCTAAGCCTGATTTGGCGGTTCTCAGCAGGCTCGAAAAGGAAATTCAGGCAAT
CAAAAAGAAATACAACATTTCTTCGTGA

Upstream 100 bases:

>100_bases
AGAAACAGTAAAAATCCCTTATATCATAGGGGTTAATGAGATTAACGACTTGATTTGGCAGTAATATTATTCTACATTTA
TTAATTTAAAAAGTAGGATT

Downstream 100 bases:

>100_bases
TAAATAATTTTAAAGATAATAATATACACAGTATACCACTTTAAAAAGGTGCAATATAATCGCGATATAGTTTAATTATG
TATAAGAATTCAATTTTACA

Product: phage integrase family protein

Products: NA

Alternate protein names: Transposase; Tyrosine Type Site-Specific Recombinase; Integrase Family Protein; Site-Specific Recombinase; Phage Integrase Family Protein; Tyrosine Site-Specific Recombinase; Site-Specific Recombinase Phage Integrase Family; Phage Integrase; Bacteriophage Integrase; Prophage; Integrase Domain Protein Sam Domain Protein; Integrase Protein; Recombinase/Integrase; Integrase/Transposase

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MLESSFGLGFFLKRPKIESKEWIVYFRITVDGIRKESSTKRRWDNTRWDQRFERAVGSKEDAKSLNFFLDSLTLKINEIK
TEMMYSGKTITAEKIMDGVLGKTAPKIKVLEEFQKHNDEMEALLGKGYAKGTLDRFTITKNHLTAFIKFKLKKHDLEFAD
LNLEFVKDFEFYLRTVRDCSNNTTLKYIANFKKIVIRAIDKELITKDPFKNFKGRKTKLVKKPLTAQELYELESHYFTTD
RLNVVRDVFVFQCYTGLAYIDAYQLKKTDIKEGIDGNLWIMSERQKTNSSFNVPLLPQALKIVEKYKEHPLCIQRGTVLP
VSSNQKMNEYLKEVAVLCGFPFTLNTHMARRTFGSTVTLNNNVPINVVKELLGHASVKQTEAYAITEQATIGREMSILNK
KLNKTGSKMSKPDLAVLSRLEKEIQAIKKKYNISS

Sequences:

>Translated_435_residues
MLESSFGLGFFLKRPKIESKEWIVYFRITVDGIRKESSTKRRWDNTRWDQRFERAVGSKEDAKSLNFFLDSLTLKINEIK
TEMMYSGKTITAEKIMDGVLGKTAPKIKVLEEFQKHNDEMEALLGKGYAKGTLDRFTITKNHLTAFIKFKLKKHDLEFAD
LNLEFVKDFEFYLRTVRDCSNNTTLKYIANFKKIVIRAIDKELITKDPFKNFKGRKTKLVKKPLTAQELYELESHYFTTD
RLNVVRDVFVFQCYTGLAYIDAYQLKKTDIKEGIDGNLWIMSERQKTNSSFNVPLLPQALKIVEKYKEHPLCIQRGTVLP
VSSNQKMNEYLKEVAVLCGFPFTLNTHMARRTFGSTVTLNNNVPINVVKELLGHASVKQTEAYAITEQATIGREMSILNK
KLNKTGSKMSKPDLAVLSRLEKEIQAIKKKYNISS
>Mature_435_residues
MLESSFGLGFFLKRPKIESKEWIVYFRITVDGIRKESSTKRRWDNTRWDQRFERAVGSKEDAKSLNFFLDSLTLKINEIK
TEMMYSGKTITAEKIMDGVLGKTAPKIKVLEEFQKHNDEMEALLGKGYAKGTLDRFTITKNHLTAFIKFKLKKHDLEFAD
LNLEFVKDFEFYLRTVRDCSNNTTLKYIANFKKIVIRAIDKELITKDPFKNFKGRKTKLVKKPLTAQELYELESHYFTTD
RLNVVRDVFVFQCYTGLAYIDAYQLKKTDIKEGIDGNLWIMSERQKTNSSFNVPLLPQALKIVEKYKEHPLCIQRGTVLP
VSSNQKMNEYLKEVAVLCGFPFTLNTHMARRTFGSTVTLNNNVPINVVKELLGHASVKQTEAYAITEQATIGREMSILNK
KLNKTGSKMSKPDLAVLSRLEKEIQAIKKKYNISS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50261; Mature: 50261

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLESSFGLGFFLKRPKIESKEWIVYFRITVDGIRKESSTKRRWDNTRWDQRFERAVGSKE
CCCCCCCCCEEEECCCCCCCCEEEEEEEEECCHHCCCCHHHHCCCCHHHHHHHHHCCCCC
DAKSLNFFLDSLTLKINEIKTEMMYSGKTITAEKIMDGVLGKTAPKIKVLEEFQKHNDEM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHCCHHH
EALLGKGYAKGTLDRFTITKNHLTAFIKFKLKKHDLEFADLNLEFVKDFEFYLRTVRDCS
HHHHHCCCCCCCCHHEEEEHHHHEEEEEEEEHHCCCEEEECCHHHHHHHHHHHHHHHHCC
NNTTLKYIANFKKIVIRAIDKELITKDPFKNFKGRKTKLVKKPLTAQELYELESHYFTTD
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHCCCCHHHHHHHHHHCCCHH
RLNVVRDVFVFQCYTGLAYIDAYQLKKTDIKEGIDGNLWIMSERQKTNSSFNVPLLPQAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHH
KIVEKYKEHPLCIQRGTVLPVSSNQKMNEYLKEVAVLCGFPFTLNTHMARRTFGSTVTLN
HHHHHHCCCCEEEECCEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEC
NNVPINVVKELLGHASVKQTEAYAITEQATIGREMSILNKKLNKTGSKMSKPDLAVLSRL
CCCCHHHHHHHHCCCCCCCCHHEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
EKEIQAIKKKYNISS
HHHHHHHHHHCCCCC
>Mature Secondary Structure
MLESSFGLGFFLKRPKIESKEWIVYFRITVDGIRKESSTKRRWDNTRWDQRFERAVGSKE
CCCCCCCCCEEEECCCCCCCCEEEEEEEEECCHHCCCCHHHHCCCCHHHHHHHHHCCCCC
DAKSLNFFLDSLTLKINEIKTEMMYSGKTITAEKIMDGVLGKTAPKIKVLEEFQKHNDEM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHCCHHH
EALLGKGYAKGTLDRFTITKNHLTAFIKFKLKKHDLEFADLNLEFVKDFEFYLRTVRDCS
HHHHHCCCCCCCCHHEEEEHHHHEEEEEEEEHHCCCEEEECCHHHHHHHHHHHHHHHHCC
NNTTLKYIANFKKIVIRAIDKELITKDPFKNFKGRKTKLVKKPLTAQELYELESHYFTTD
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHCCCCHHHHHHHHHHCCCHH
RLNVVRDVFVFQCYTGLAYIDAYQLKKTDIKEGIDGNLWIMSERQKTNSSFNVPLLPQAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHH
KIVEKYKEHPLCIQRGTVLPVSSNQKMNEYLKEVAVLCGFPFTLNTHMARRTFGSTVTLN
HHHHHHCCCCEEEECCEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEC
NNVPINVVKELLGHASVKQTEAYAITEQATIGREMSILNKKLNKTGSKMSKPDLAVLSRL
CCCCHHHHHHHHCCCCCCCCHHEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
EKEIQAIKKKYNISS
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA