Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302063

Identifier: 146302063

GI number: 146302063

Start: 5227300

End: 5228544

Strand: Reverse

Name: 146302063

Synonym: Fjoh_4327

Alternate gene names: NA

Gene position: 5228544-5227300 (Counterclockwise)

Preceding gene: 146302064

Following gene: 146302062

Centisome position: 85.76

GC content: 37.03

Gene sequence:

>1245_bases
ATGAAAAGATATATCACATTATTGTTTTTCGGGATAATGAACATTTTAGTCGTTTCTGGCTGCAGCAGTGATGATAAAGG
TTCAGATGAGCCTGTAAAACCTGAAACGCTTAAACCGGTTGCGATTGAAAAAACAAACAGCACCAAAATTTATGTTCATT
ACATGCCATGGTTTGAAACCAATGAAAGCAGCGCCGATAAAAAATGGGGCTACCATTGGACAATGGCAAACAAAAACCCG
AATACGGTAGGAGCAAATAACCGCAGAGAAATTGCGTCGTACTATTATCCTCTTATCGGACCGTATCATTCCGGCGATAA
AAATGTGATTGAAAATCATTTATTATTGATGAAATATTCAGGAATCGATGGAATTTTAATCGATTGGTACGGAACTTACG
ACGTAAACGATTACCGAATGGTAAAAGAAAACACAGAACAGCTTATTGCAGTTCTGGACAAAGTTGGTTTAGAATATGCC
ATAGTTTATGAAGACAGAACTACAACAAATGTGGTAAATGCCGGAAAAGCAATTTCTGTGACCAGCGCTGCAAAAACAGA
TTTGGCTTACATGGAAAAAAACTATTTTAATAATGCCAATTACATTAAAGTAGACGGAAAACCATTACTGCTTAATTTTG
GACCAATTGTATTGCAGACACCTGCTGAATGGACGAATGTTTTTAATACATTAACTACAAAACCTACATTTTTAACCCTT
TGGGATCAGTCTGTAGAAGCTGGTGCAAATGCAGCTGGAGAATATGCCTGGGTTTATAAAGACAATAGTTTCTTAACGAA
TTATTACACCAACACAAAACCAAAACTTTCTGTTGCTATGGGAAGTGCTTATCCTGGTTTTAAAGATTTTTATGCCGAAG
GCGGCGGCGGAGCAGCAATTGGATGGACAATTGAACACAACAATGGCGCAACGCTGGATGCAACACTCGAATTAGCTAAA
AATGCCAATTTAAATTATCTGCAGCTGATTACATGGAATGACTTTGGAGAAGGAACAATGTTCGAACCTACAGTTGAATT
TGGATACACGTATATCGAAAAAGTAAAGGCATTTGCCGGAGTTAAAAATACCGAATCTGTTTTTCCGGAAATAAGCAAAA
TGTACAATCTGCGTGTAGAAAAGAAAGGGAATGCCGATGTTCAGAACAAGCTGGATCAGGCTTTTAATTATTTTGTTTCA
ATGCAGCCTGCAAAAGCAAAACAGTTAATAAACGAAATAAAATAA

Upstream 100 bases:

>100_bases
TCACTGATTAAAGAATTAAGTTTTTAATAAAAAATCCTTTTTAATTTTTTATCCCGATAACTATCGGGAGTGGCAAAAAA
TAATAAAAACAAAAATCAAT

Downstream 100 bases:

>100_bases
GAGCCGTAATTAATACCAATACATAATGAGAAACATAAGATATAGATACTGTATAATCGCCTTAGCTTCAATGCTTCTTT
TTGCCTGCAGTACTAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MKRYITLLFFGIMNILVVSGCSSDDKGSDEPVKPETLKPVAIEKTNSTKIYVHYMPWFETNESSADKKWGYHWTMANKNP
NTVGANNRREIASYYYPLIGPYHSGDKNVIENHLLLMKYSGIDGILIDWYGTYDVNDYRMVKENTEQLIAVLDKVGLEYA
IVYEDRTTTNVVNAGKAISVTSAAKTDLAYMEKNYFNNANYIKVDGKPLLLNFGPIVLQTPAEWTNVFNTLTTKPTFLTL
WDQSVEAGANAAGEYAWVYKDNSFLTNYYTNTKPKLSVAMGSAYPGFKDFYAEGGGGAAIGWTIEHNNGATLDATLELAK
NANLNYLQLITWNDFGEGTMFEPTVEFGYTYIEKVKAFAGVKNTESVFPEISKMYNLRVEKKGNADVQNKLDQAFNYFVS
MQPAKAKQLINEIK

Sequences:

>Translated_414_residues
MKRYITLLFFGIMNILVVSGCSSDDKGSDEPVKPETLKPVAIEKTNSTKIYVHYMPWFETNESSADKKWGYHWTMANKNP
NTVGANNRREIASYYYPLIGPYHSGDKNVIENHLLLMKYSGIDGILIDWYGTYDVNDYRMVKENTEQLIAVLDKVGLEYA
IVYEDRTTTNVVNAGKAISVTSAAKTDLAYMEKNYFNNANYIKVDGKPLLLNFGPIVLQTPAEWTNVFNTLTTKPTFLTL
WDQSVEAGANAAGEYAWVYKDNSFLTNYYTNTKPKLSVAMGSAYPGFKDFYAEGGGGAAIGWTIEHNNGATLDATLELAK
NANLNYLQLITWNDFGEGTMFEPTVEFGYTYIEKVKAFAGVKNTESVFPEISKMYNLRVEKKGNADVQNKLDQAFNYFVS
MQPAKAKQLINEIK
>Mature_414_residues
MKRYITLLFFGIMNILVVSGCSSDDKGSDEPVKPETLKPVAIEKTNSTKIYVHYMPWFETNESSADKKWGYHWTMANKNP
NTVGANNRREIASYYYPLIGPYHSGDKNVIENHLLLMKYSGIDGILIDWYGTYDVNDYRMVKENTEQLIAVLDKVGLEYA
IVYEDRTTTNVVNAGKAISVTSAAKTDLAYMEKNYFNNANYIKVDGKPLLLNFGPIVLQTPAEWTNVFNTLTTKPTFLTL
WDQSVEAGANAAGEYAWVYKDNSFLTNYYTNTKPKLSVAMGSAYPGFKDFYAEGGGGAAIGWTIEHNNGATLDATLELAK
NANLNYLQLITWNDFGEGTMFEPTVEFGYTYIEKVKAFAGVKNTESVFPEISKMYNLRVEKKGNADVQNKLDQAFNYFVS
MQPAKAKQLINEIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46599; Mature: 46599

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYITLLFFGIMNILVVSGCSSDDKGSDEPVKPETLKPVAIEKTNSTKIYVHYMPWFET
CCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCEEC
NESSADKKWGYHWTMANKNPNTVGANNRREIASYYYPLIGPYHSGDKNVIENHLLLMKYS
CCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCEEEEEEEC
GIDGILIDWYGTYDVNDYRMVKENTEQLIAVLDKVGLEYAIVYEDRTTTNVVNAGKAISV
CCCEEEEEEEEEECCCCEEEEHHHHHHHHHHHHHCCCEEEEEECCCCCCHHCCCCCEEEE
TSAAKTDLAYMEKNYFNNANYIKVDGKPLLLNFGPIVLQTPAEWTNVFNTLTTKPTFLTL
ECHHHHHHHHHHHHHCCCCCEEEECCEEEEEECCCEEEECCHHHHHHHHHHCCCCEEEEE
WDQSVEAGANAAGEYAWVYKDNSFLTNYYTNTKPKLSVAMGSAYPGFKDFYAEGGGGAAI
ECCHHHCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCHHHHHCCCCCCEEE
GWTIEHNNGATLDATLELAKNANLNYLQLITWNDFGEGTMFEPTVEFGYTYIEKVKAFAG
EEEEECCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHC
VKNTESVFPEISKMYNLRVEKKGNADVQNKLDQAFNYFVSMQPAKAKQLINEIK
CCCCHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHEECCCHHHHHHHHHCC
>Mature Secondary Structure
MKRYITLLFFGIMNILVVSGCSSDDKGSDEPVKPETLKPVAIEKTNSTKIYVHYMPWFET
CCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCEEC
NESSADKKWGYHWTMANKNPNTVGANNRREIASYYYPLIGPYHSGDKNVIENHLLLMKYS
CCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCEEEEEEEC
GIDGILIDWYGTYDVNDYRMVKENTEQLIAVLDKVGLEYAIVYEDRTTTNVVNAGKAISV
CCCEEEEEEEEEECCCCEEEEHHHHHHHHHHHHHCCCEEEEEECCCCCCHHCCCCCEEEE
TSAAKTDLAYMEKNYFNNANYIKVDGKPLLLNFGPIVLQTPAEWTNVFNTLTTKPTFLTL
ECHHHHHHHHHHHHHCCCCCEEEECCEEEEEECCCEEEECCHHHHHHHHHHCCCCEEEEE
WDQSVEAGANAAGEYAWVYKDNSFLTNYYTNTKPKLSVAMGSAYPGFKDFYAEGGGGAAI
ECCHHHCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCHHHHHCCCCCCEEE
GWTIEHNNGATLDATLELAKNANLNYLQLITWNDFGEGTMFEPTVEFGYTYIEKVKAFAG
EEEEECCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHC
VKNTESVFPEISKMYNLRVEKKGNADVQNKLDQAFNYFVSMQPAKAKQLINEIK
CCCCHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHEECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA