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The map label for this gene is 146302058

Identifier: 146302058

GI number: 146302058

Start: 5221307

End: 5221789

Strand: Direct

Name: 146302058

Synonym: Fjoh_4322

Alternate gene names: NA

Gene position: 5221307-5221789 (Clockwise)

Preceding gene: 146302055

Following gene: 146302059

Centisome position: 85.64

GC content: 33.13

Gene sequence:

>483_bases
ATGAAAAGCTATTCTTTTTCTCCTATAAGCTCACCAGATTCTAAAGTGTTGATTTTAGGCACGATGCCCGGAACAAAATC
TTTAGAGTTAAATCAATATTACGGACACAGCCAGAATAATTTCTGGAAGTTTATGTTTACAATTTTTAAAGAAGAGTTCT
CAACTGATTATGAGACTAAAAAAGCCCTTTTGCTAAAAAACAAAATTGCACTGTGGGATGTTTTACAATACTGCGACCGC
GTAGGAAGTTTAGACAGTGCCATAAAAAATGAAATCGCGAATGATTTTGAAACTTTTTTAAAACAGCATCCAAACATTCA
TACAATAGCATTTAACGGACAAAAAGCTGCAGCGTTCTTTAAAAAGTATGTTCATTTAAAAAAAGACTATACTCTTATTA
CACTTCCATCAACAAGTCCGGCAAATGCCAGTAAAGCTTTTCAATCAAAATTGGATGAATGGAAAGTTATAGCTTCGCTT
TAA

Upstream 100 bases:

>100_bases
CAATCGTAAACCAAAAATGTTATATAATTTTCCTCAATTGTTTTATAATTACTAATTAATGATATTTTTAACTCAAACAA
ACTATTTCTTAATTCAATAA

Downstream 100 bases:

>100_bases
CTATTTTAATATCGACTAAAAAATAATTTATGATTTCGCGGCAAAAAAAACAAAATGTTGAAATAATGTAACTTTTGAAC
TTTAAAATATAACACGAAAT

Product: G:T/U mismatch-specific DNA glycosylase-like protein

Products: NA

Alternate protein names: Uracil-DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily; T/U Mismatch-Specific DNA Glycosylase; Mug GT/U Mismatch-Specific DNA Glycosylase; G/U Mismatch-Specific DNA Glycosylase; GT/U Mismatch-Specific DNA Glycosylase-Like Protein; DNA Glycosylase; G/U Mismatch-Specific Uracil-DNA Glycosylase; G-T/U Mismatch-Specific DNA Glycosylase-Like; Uracil DNA Glycosylase Superfamily; YjeF-Like Protein; GT/U Mismatch-Specific Uracil/Thymine DNA-Glycosylase

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MKSYSFSPISSPDSKVLILGTMPGTKSLELNQYYGHSQNNFWKFMFTIFKEEFSTDYETKKALLLKNKIALWDVLQYCDR
VGSLDSAIKNEIANDFETFLKQHPNIHTIAFNGQKAAAFFKKYVHLKKDYTLITLPSTSPANASKAFQSKLDEWKVIASL

Sequences:

>Translated_160_residues
MKSYSFSPISSPDSKVLILGTMPGTKSLELNQYYGHSQNNFWKFMFTIFKEEFSTDYETKKALLLKNKIALWDVLQYCDR
VGSLDSAIKNEIANDFETFLKQHPNIHTIAFNGQKAAAFFKKYVHLKKDYTLITLPSTSPANASKAFQSKLDEWKVIASL
>Mature_160_residues
MKSYSFSPISSPDSKVLILGTMPGTKSLELNQYYGHSQNNFWKFMFTIFKEEFSTDYETKKALLLKNKIALWDVLQYCDR
VGSLDSAIKNEIANDFETFLKQHPNIHTIAFNGQKAAAFFKKYVHLKKDYTLITLPSTSPANASKAFQSKLDEWKVIASL

Specific function: Unknown

COG id: COG3663

COG function: function code L; G:T/U mismatch-specific DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18305; Mature: 18305

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSYSFSPISSPDSKVLILGTMPGTKSLELNQYYGHSQNNFWKFMFTIFKEEFSTDYETK
CCCCCCCCCCCCCCCEEEEECCCCCCCEEEHHHCCCCCCCHHHHHHHHHHHHHCCCHHHH
KALLLKNKIALWDVLQYCDRVGSLDSAIKNEIANDFETFLKQHPNIHTIAFNGQKAAAFF
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH
KKYVHLKKDYTLITLPSTSPANASKAFQSKLDEWKVIASL
HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSYSFSPISSPDSKVLILGTMPGTKSLELNQYYGHSQNNFWKFMFTIFKEEFSTDYETK
CCCCCCCCCCCCCCCEEEEECCCCCCCEEEHHHCCCCCCCHHHHHHHHHHHHHCCCHHHH
KALLLKNKIALWDVLQYCDRVGSLDSAIKNEIANDFETFLKQHPNIHTIAFNGQKAAAFF
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH
KKYVHLKKDYTLITLPSTSPANASKAFQSKLDEWKVIASL
HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA