| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302041
Identifier: 146302041
GI number: 146302041
Start: 5203523
End: 5203903
Strand: Direct
Name: 146302041
Synonym: Fjoh_4305
Alternate gene names: NA
Gene position: 5203523-5203903 (Clockwise)
Preceding gene: 146302040
Following gene: 146302042
Centisome position: 85.35
GC content: 31.23
Gene sequence:
>381_bases ATGAAAAAAGCAAAAATTATTTTTTGGATTACGACTACTATTATTTTTCTATTCGAAGGTGTTATGCCGGCTTTGACATC ACAAACAGAATTAGCCAAAGAAGGAATCAGACATTTAGGCTATCCAGAATATTTTGGAAATGCCCTTGTGATTTTCAAAA TTCTGGGTGTTTTAGTTTTAGTGATTCCATCAGTTCCTAAAAATGTAAAAGAATGGGCGTATGCCGGATTTGGTTTCGAT TTTATATTTGCTTCAATTAGTCATTTTGCGGTAGACGGAATCAATTTTCAAAGTTTCTTCCCTTTAATCTTTTTAGTGAT TTTGGCAATTTCTTATATCTATTATCATAAAATAGAGCGATACAAAAATATCGCTTTGTAA
Upstream 100 bases:
>100_bases CTCAAATGCCCCTAAAATAGTCGGAAATAGCTGTTTCATGAAAAAATAAGAATAGTACATTTGTAATACATTAACTGATA ACTATTTAAAAATAAACCAC
Downstream 100 bases:
>100_bases AACTTCAAACGATGATAGAAGTTTTCAAAACAAATGTTCAGGAAGTCGAAGAATCTATAATGATTATAGGAAAACTTCTT GAACATTTCCCTAACAGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MKKAKIIFWITTTIIFLFEGVMPALTSQTELAKEGIRHLGYPEYFGNALVIFKILGVLVLVIPSVPKNVKEWAYAGFGFD FIFASISHFAVDGINFQSFFPLIFLVILAISYIYYHKIERYKNIAL
Sequences:
>Translated_126_residues MKKAKIIFWITTTIIFLFEGVMPALTSQTELAKEGIRHLGYPEYFGNALVIFKILGVLVLVIPSVPKNVKEWAYAGFGFD FIFASISHFAVDGINFQSFFPLIFLVILAISYIYYHKIERYKNIAL >Mature_126_residues MKKAKIIFWITTTIIFLFEGVMPALTSQTELAKEGIRHLGYPEYFGNALVIFKILGVLVLVIPSVPKNVKEWAYAGFGFD FIFASISHFAVDGINFQSFFPLIFLVILAISYIYYHKIERYKNIAL
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14418; Mature: 14418
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAKIIFWITTTIIFLFEGVMPALTSQTELAKEGIRHLGYPEYFGNALVIFKILGVLVL CCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHH VIPSVPKNVKEWAYAGFGFDFIFASISHFAVDGINFQSFFPLIFLVILAISYIYYHKIER HHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YKNIAL HHHCCC >Mature Secondary Structure MKKAKIIFWITTTIIFLFEGVMPALTSQTELAKEGIRHLGYPEYFGNALVIFKILGVLVL CCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHH VIPSVPKNVKEWAYAGFGFDFIFASISHFAVDGINFQSFFPLIFLVILAISYIYYHKIER HHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YKNIAL HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA