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The map label for this gene is yteR [H]

Identifier: 146301987

GI number: 146301987

Start: 5131763

End: 5132968

Strand: Reverse

Name: yteR [H]

Synonym: Fjoh_4251

Alternate gene names: 146301987

Gene position: 5132968-5131763 (Counterclockwise)

Preceding gene: 146301988

Following gene: 146301986

Centisome position: 84.19

GC content: 35.07

Gene sequence:

>1206_bases
ATGATAAAGAAAAGCCATTTTAGTTTTGCCCAAATCATGCTTATAAGTATGATGCTGTTTTCATTGAATGCACTTTTGGC
ACAATCCTCAAATACCATTTCAAAAGATTTAAAATGGTCAGAGCGAATGGCACTTTCTGTTATCAAACGTGCTCCGCAGG
CCTGGCAGGTCGACAATAACGAAAAACCAAAATGGGATTATAAATTAGGTCTTTTGATGACTTCTTTTGAAAAACTGTAT
CAAAAAACAAATAATCCTGTTTATGCAGATTACATCAAAGCATACGGAGAAACAGTAATTAATCCTTTGGGAGAAATTAT
GAATTACAAACTTGAAGATTATAATATCGATTATGTAAATCCGGGTAAGTTTTTGTTTGATCTTTATAAAAGAACAAACG
ACAATCGTTATTTAACAGCATTACAGACTTTAAGAAAGCAATTAGAAACCCATCCAAGAACAAATTCAGGAGGATTTTGG
CATAAAAAAATATACCCGTATCAAATGTGGCTTGACGGTTTGTATATGGGAACGCCTTTCTATGCACGCTACACAGTAGA
ATTTGATAATGGAAAAGATTTAGATGATGTTGCTAAACAATTCGAACAAATACATCTGCATACGCTCGATAAAAATACCG
GACTGCTTTTTCATGCCTGGGATGAAAGCAAACAGATGCCGTGGGCGAATAAAGAAACGGGAGTTTCACCCAATTTCTGG
TCACGTTCTATTGGCTGGTATATGATGGCTTTGGTTGATGTTTTGGATTACATGCCAAAAGAACATCCAAAAAGAAAAGA
ACTCATTCAGTATCTAAATGATATTTCAAAAGCTGTGGCAAAATATCAGGACAAATCAGGATTGTGGTATCAGGTTACAG
ATGCGGGAAATAAAGAAGGAAATTACCTTGAAGCTTCGGGATCTGAAATGTTTGTTTACGCTTTCGCGAAAGGAGTAAAC
AAAGGATATTTACCGGCAAAGTATAAAAAATTAGCTAAAAAAGGTTTTAATGGCATAACTGAAAAACTAATAAAAGTTGA
TGCAGACGGTGAAATTCATATTACACAGGTTTGTGCCAGTGCAGGTTTAGGAGGAAATCCATACCGAGACGGTTCTTTTG
AATATTATATTAAGGAAAAAATAAAAATAGACAACTCACACGGATTAGGGCCTTTTATTCTGGCCGCATTAGAAGTAGAA
AAATAG

Upstream 100 bases:

>100_bases
CGAATATTATGCTAAAAGCAAAACAAAAGACAACAGTTCGCCGGCATTAGCAGCATTTTTGCTGAGTGCAGTAGAATTAA
ACAAGTAAAATTGATTTAAG

Downstream 100 bases:

>100_bases
TAGAATTTAAATATATTTTGAAATGAAAAATAGTAGGAAACACAGTTTTATGTCGGTTTTATTAGTTTGCGTAATGGCTT
TAACAGGCTGTAAAGTAACT

Product: glycosyl hydrolase family protein

Products: NA

Alternate protein names: URH [H]

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MIKKSHFSFAQIMLISMMLFSLNALLAQSSNTISKDLKWSERMALSVIKRAPQAWQVDNNEKPKWDYKLGLLMTSFEKLY
QKTNNPVYADYIKAYGETVINPLGEIMNYKLEDYNIDYVNPGKFLFDLYKRTNDNRYLTALQTLRKQLETHPRTNSGGFW
HKKIYPYQMWLDGLYMGTPFYARYTVEFDNGKDLDDVAKQFEQIHLHTLDKNTGLLFHAWDESKQMPWANKETGVSPNFW
SRSIGWYMMALVDVLDYMPKEHPKRKELIQYLNDISKAVAKYQDKSGLWYQVTDAGNKEGNYLEASGSEMFVYAFAKGVN
KGYLPAKYKKLAKKGFNGITEKLIKVDADGEIHITQVCASAGLGGNPYRDGSFEYYIKEKIKIDNSHGLGPFILAALEVE
K

Sequences:

>Translated_401_residues
MIKKSHFSFAQIMLISMMLFSLNALLAQSSNTISKDLKWSERMALSVIKRAPQAWQVDNNEKPKWDYKLGLLMTSFEKLY
QKTNNPVYADYIKAYGETVINPLGEIMNYKLEDYNIDYVNPGKFLFDLYKRTNDNRYLTALQTLRKQLETHPRTNSGGFW
HKKIYPYQMWLDGLYMGTPFYARYTVEFDNGKDLDDVAKQFEQIHLHTLDKNTGLLFHAWDESKQMPWANKETGVSPNFW
SRSIGWYMMALVDVLDYMPKEHPKRKELIQYLNDISKAVAKYQDKSGLWYQVTDAGNKEGNYLEASGSEMFVYAFAKGVN
KGYLPAKYKKLAKKGFNGITEKLIKVDADGEIHITQVCASAGLGGNPYRDGSFEYYIKEKIKIDNSHGLGPFILAALEVE
K
>Mature_401_residues
MIKKSHFSFAQIMLISMMLFSLNALLAQSSNTISKDLKWSERMALSVIKRAPQAWQVDNNEKPKWDYKLGLLMTSFEKLY
QKTNNPVYADYIKAYGETVINPLGEIMNYKLEDYNIDYVNPGKFLFDLYKRTNDNRYLTALQTLRKQLETHPRTNSGGFW
HKKIYPYQMWLDGLYMGTPFYARYTVEFDNGKDLDDVAKQFEQIHLHTLDKNTGLLFHAWDESKQMPWANKETGVSPNFW
SRSIGWYMMALVDVLDYMPKEHPKRKELIQYLNDISKAVAKYQDKSGLWYQVTDAGNKEGNYLEASGSEMFVYAFAKGVN
KGYLPAKYKKLAKKGFNGITEKLIKVDADGEIHITQVCASAGLGGNPYRDGSFEYYIKEKIKIDNSHGLGPFILAALEVE
K

Specific function: Catalyzes the hydrolysis of unsaturated rhamnogalacturonan disaccharide to yield unsaturated D- galacturonic acid and L-rhamnose. It cannot act on unsaturated glucuronyl hydrolase (UGL) substrates containing unsaturated D- glucuronic acid at the non-reduc

COG id: COG4225

COG function: function code R; Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 105 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010905 [H]

Pfam domain/function: PF07470 Glyco_hydro_88 [H]

EC number: NA

Molecular weight: Translated: 46310; Mature: 46310

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKSHFSFAQIMLISMMLFSLNALLAQSSNTISKDLKWSERMALSVIKRAPQAWQVDNN
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCC
EKPKWDYKLGLLMTSFEKLYQKTNNPVYADYIKAYGETVINPLGEIMNYKLEDYNIDYVN
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEC
PGKFLFDLYKRTNDNRYLTALQTLRKQLETHPRTNSGGFWHKKIYPYQMWLDGLYMGTPF
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHCCEEECCCE
YARYTVEFDNGKDLDDVAKQFEQIHLHTLDKNTGLLFHAWDESKQMPWANKETGVSPNFW
EEEEEEEECCCCCHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCH
SRSIGWYMMALVDVLDYMPKEHPKRKELIQYLNDISKAVAKYQDKSGLWYQVTDAGNKEG
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
NYLEASGSEMFVYAFAKGVNKGYLPAKYKKLAKKGFNGITEKLIKVDADGEIHITQVCAS
CEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHEEECCCCCEEHHHHHHH
AGLGGNPYRDGSFEYYIKEKIKIDNSHGLGPFILAALEVEK
CCCCCCCCCCCCEEEEEEEEEEECCCCCCCHHHHEEEECCC
>Mature Secondary Structure
MIKKSHFSFAQIMLISMMLFSLNALLAQSSNTISKDLKWSERMALSVIKRAPQAWQVDNN
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCC
EKPKWDYKLGLLMTSFEKLYQKTNNPVYADYIKAYGETVINPLGEIMNYKLEDYNIDYVN
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEC
PGKFLFDLYKRTNDNRYLTALQTLRKQLETHPRTNSGGFWHKKIYPYQMWLDGLYMGTPF
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHCCEEECCCE
YARYTVEFDNGKDLDDVAKQFEQIHLHTLDKNTGLLFHAWDESKQMPWANKETGVSPNFW
EEEEEEEECCCCCHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCH
SRSIGWYMMALVDVLDYMPKEHPKRKELIQYLNDISKAVAKYQDKSGLWYQVTDAGNKEG
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
NYLEASGSEMFVYAFAKGVNKGYLPAKYKKLAKKGFNGITEKLIKVDADGEIHITQVCAS
CEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHEEECCCCCEEHHHHHHH
AGLGGNPYRDGSFEYYIKEKIKIDNSHGLGPFILAALEVEK
CCCCCCCCCCCCEEEEEEEEEEECCCCCCCHHHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]