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The map label for this gene is yteR [H]

Identifier: 146301986

GI number: 146301986

Start: 5130520

End: 5131713

Strand: Reverse

Name: yteR [H]

Synonym: Fjoh_4250

Alternate gene names: 146301986

Gene position: 5131713-5130520 (Counterclockwise)

Preceding gene: 146301987

Following gene: 146301985

Centisome position: 84.17

GC content: 36.52

Gene sequence:

>1194_bases
ATGTCGGTTTTATTAGTTTGCGTAATGGCTTTAACAGGCTGTAAAGTAACTTCACAAGAAACGGCAAAAAAAGAAATCGT
TATTTCGAAAGACATGAAATGGTCAGATAAAATGGCTTTAACTTTAATGAAACGTCATCCAGAAAGCTATATGCTTGATG
ATGCCAAAAAGCCAAAATGGGATTATGTTCATGCCTTGGTCCTGCATTCAATTGAAGAATTAAACAAGAAAAATCCAGAT
CCGCGTTACAAAGCTTACATAAGAGGTTATGTAGATGAATTAGTGCAGGAAGACGGAACAATTAAAACCTACGAACTAGA
CAAATACAATATAGATTTAGTGGTTCCGGGACGTCTGCTTTTTGCTATTTATGCGGAAACTAAACAGGATAAATATTTAA
AAGCAATGCAGCTGGTTCGCCAGCAGTTAACAGAACAGCCTCGTACTGCGAGCGGCGGTTTCTGGCACAAACAAATCTAT
CCAAACCAAATGTGGTTAGACGGTTTGTATATGGGAGAACCATTCTATGCAGAATATACTGCGGCATTTGAAAACGGAAA
AAGTTTTGATGATATCGCAAAACAATTTGAATTAATTCAGTTGCATGCAACAGATCCAAAAACAGGATTATTATACCACG
GATGGGATGAAAGCAAAGCAATGCCGTGGGCAAATAAAGAAACAGGAAATTCTCCAAATTTCTGGTCTAGAGCTTTAGGA
TGGTATGTAATGGCATTAGTAGATGTTTTAGATTATTTCCCAAAAGATCACCCAAAAAGACCAGAGCTGATAAAATACTT
AAACAACGCATCTGCAGCTTTGGCAAAATATCAGGATAAATCTGGATTGTGGTATCAGGTTACAGACAAAGGAGGAGAAA
AAGGAAATTACTTAGAAGCTTCAGGATCTGCTATGTTTGCGTATGCTTTTGCAAAAGGAGCAAACAAAGGATATTTACCA
TCAAAATATAAAAAACTGGCTAATAAAGCGTTTGACGGATTAACAACAGTTTTAATTAAAAAAGTAGACGAAGATGGCGG
GATTACTTTAACAAACTGCTGTCAGGTTGCAGGTTTAGGAGGAACTCCATATCGTGATGGTTCTTATGAATATTATGTAA
ACGAAAGAAAAAAAGATAACGACCCTAAAGCAACTGGTCCTTTTATTTTGGCAGCTTTAGAATTGAATAGATAG

Upstream 100 bases:

>100_bases
TCACACGGATTAGGGCCTTTTATTCTGGCCGCATTAGAAGTAGAAAAATAGTAGAATTTAAATATATTTTGAAATGAAAA
ATAGTAGGAAACACAGTTTT

Downstream 100 bases:

>100_bases
TTTATAATTGTTAATTATGAATTATTAATTCTGGATTGTGAGCTTTCATTGTCTTCCTGAGCAAAGTCGAAGGATGGCAG
AGTAAGTTCTCAAACTAATT

Product: glycosyl hydrolase family protein

Products: NA

Alternate protein names: URH [H]

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MSVLLVCVMALTGCKVTSQETAKKEIVISKDMKWSDKMALTLMKRHPESYMLDDAKKPKWDYVHALVLHSIEELNKKNPD
PRYKAYIRGYVDELVQEDGTIKTYELDKYNIDLVVPGRLLFAIYAETKQDKYLKAMQLVRQQLTEQPRTASGGFWHKQIY
PNQMWLDGLYMGEPFYAEYTAAFENGKSFDDIAKQFELIQLHATDPKTGLLYHGWDESKAMPWANKETGNSPNFWSRALG
WYVMALVDVLDYFPKDHPKRPELIKYLNNASAALAKYQDKSGLWYQVTDKGGEKGNYLEASGSAMFAYAFAKGANKGYLP
SKYKKLANKAFDGLTTVLIKKVDEDGGITLTNCCQVAGLGGTPYRDGSYEYYVNERKKDNDPKATGPFILAALELNR

Sequences:

>Translated_397_residues
MSVLLVCVMALTGCKVTSQETAKKEIVISKDMKWSDKMALTLMKRHPESYMLDDAKKPKWDYVHALVLHSIEELNKKNPD
PRYKAYIRGYVDELVQEDGTIKTYELDKYNIDLVVPGRLLFAIYAETKQDKYLKAMQLVRQQLTEQPRTASGGFWHKQIY
PNQMWLDGLYMGEPFYAEYTAAFENGKSFDDIAKQFELIQLHATDPKTGLLYHGWDESKAMPWANKETGNSPNFWSRALG
WYVMALVDVLDYFPKDHPKRPELIKYLNNASAALAKYQDKSGLWYQVTDKGGEKGNYLEASGSAMFAYAFAKGANKGYLP
SKYKKLANKAFDGLTTVLIKKVDEDGGITLTNCCQVAGLGGTPYRDGSYEYYVNERKKDNDPKATGPFILAALELNR
>Mature_396_residues
SVLLVCVMALTGCKVTSQETAKKEIVISKDMKWSDKMALTLMKRHPESYMLDDAKKPKWDYVHALVLHSIEELNKKNPDP
RYKAYIRGYVDELVQEDGTIKTYELDKYNIDLVVPGRLLFAIYAETKQDKYLKAMQLVRQQLTEQPRTASGGFWHKQIYP
NQMWLDGLYMGEPFYAEYTAAFENGKSFDDIAKQFELIQLHATDPKTGLLYHGWDESKAMPWANKETGNSPNFWSRALGW
YVMALVDVLDYFPKDHPKRPELIKYLNNASAALAKYQDKSGLWYQVTDKGGEKGNYLEASGSAMFAYAFAKGANKGYLPS
KYKKLANKAFDGLTTVLIKKVDEDGGITLTNCCQVAGLGGTPYRDGSYEYYVNERKKDNDPKATGPFILAALELNR

Specific function: Catalyzes the hydrolysis of unsaturated rhamnogalacturonan disaccharide to yield unsaturated D- galacturonic acid and L-rhamnose. It cannot act on unsaturated glucuronyl hydrolase (UGL) substrates containing unsaturated D- glucuronic acid at the non-reduc

COG id: COG4225

COG function: function code R; Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 105 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010905 [H]

Pfam domain/function: PF07470 Glyco_hydro_88 [H]

EC number: NA

Molecular weight: Translated: 45154; Mature: 45023

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLLVCVMALTGCKVTSQETAKKEIVISKDMKWSDKMALTLMKRHPESYMLDDAKKPKW
CHHHHHHHHHHHCCCCCCHHHHHHEEEEECCCCCCHHHHHHHHHHCCCHHHCCCCCCCCH
DYVHALVLHSIEELNKKNPDPRYKAYIRGYVDELVQEDGTIKTYELDKYNIDLVVPGRLL
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCCEE
FAIYAETKQDKYLKAMQLVRQQLTEQPRTASGGFWHKQIYPNQMWLDGLYMGEPFYAEYT
EEEHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEHCCCCCCEEECEEECCCCCHHHHH
AAFENGKSFDDIAKQFELIQLHATDPKTGLLYHGWDESKAMPWANKETGNSPNFWSRALG
HHHHCCCCHHHHHHHEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH
WYVMALVDVLDYFPKDHPKRPELIKYLNNASAALAKYQDKSGLWYQVTDKGGEKGNYLEA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEC
SGSAMFAYAFAKGANKGYLPSKYKKLANKAFDGLTTVLIKKVDEDGGITLTNCCQVAGLG
CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCC
GTPYRDGSYEYYVNERKKDNDPKATGPFILAALELNR
CCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure 
SVLLVCVMALTGCKVTSQETAKKEIVISKDMKWSDKMALTLMKRHPESYMLDDAKKPKW
HHHHHHHHHHHCCCCCCHHHHHHEEEEECCCCCCHHHHHHHHHHCCCHHHCCCCCCCCH
DYVHALVLHSIEELNKKNPDPRYKAYIRGYVDELVQEDGTIKTYELDKYNIDLVVPGRLL
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCCEE
FAIYAETKQDKYLKAMQLVRQQLTEQPRTASGGFWHKQIYPNQMWLDGLYMGEPFYAEYT
EEEHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEHCCCCCCEEECEEECCCCCHHHHH
AAFENGKSFDDIAKQFELIQLHATDPKTGLLYHGWDESKAMPWANKETGNSPNFWSRALG
HHHHCCCCHHHHHHHEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH
WYVMALVDVLDYFPKDHPKRPELIKYLNNASAALAKYQDKSGLWYQVTDKGGEKGNYLEA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEC
SGSAMFAYAFAKGANKGYLPSKYKKLANKAFDGLTTVLIKKVDEDGGITLTNCCQVAGLG
CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCC
GTPYRDGSYEYYVNERKKDNDPKATGPFILAALELNR
CCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]