| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146301981
Identifier: 146301981
GI number: 146301981
Start: 5117109
End: 5118275
Strand: Reverse
Name: 146301981
Synonym: Fjoh_4245
Alternate gene names: NA
Gene position: 5118275-5117109 (Counterclockwise)
Preceding gene: 146301982
Following gene: 146301980
Centisome position: 83.95
GC content: 28.45
Gene sequence:
>1167_bases ATGCAGTATATGAAAACTCCTTCTTCAGAATCTGCTGGTGTTTTAAACGCAATTGGCAACTGTTATTTTAGAAACAAAGA TTTAGCAAATGCCATGCATTATTTAAATAAATCTGAAGCAATGGCTTTAAAAGTTGGCGACAGTGCAAGATATGCAAAAA TTTTAGGTGATAAAGCACTCATTTACGAAGAAAAAGGAAATCTAAAAGATGCCGTACATTTATTAAAACAAGATATTTTT TACTCTCAAAAATTTAAAATTGATAAGAATGAGATGTATGCTTCTATATTATTGGCTAAAATTCTTTTAAAACTAAAAGA TACCGATAAGGTTGAAGAAATATTAGACAGGGCCGGAAATATTGCGAGTTCAAAATCTTACTACAGAAGTTCTTTAAAAG AAGTAATTGAATTAAAACTTAGTATTTTAAATGGTAGAAATCCAGAAAAAGAGCTTTTGTTAAGACGTCAGCTTAAACAA ATTGATGAATATCTTCTTAGTACAAACGGCAATACCGTATTGCAAAGATCGCATTGGCTTATTCAGAAGAAGAAATATGA AAATGATACTAATAAAATCCGGCTGGAATTAGAGCAGGGAGAAAGAATGAAAAAGATTTATATTCTAATTTTAATCTTAA CCATTTCATTAAGTATTGTTTTGTACCATTCTTTAAATAAAAAATTAAAAGCAAAAAGAATAAAACTTGAAAATGACAGG CTGCTTTTTGAACAAAAGCTTAACGATGCCAGTTCAGATATAGATGCGTATACAGAATATCTTGAAAATAAAAATAAACA GATTTCTATTTTAGAAAATGAGCTTGAAGTAATTAAAACTACAACTTCCAGACATTTAAATGACGAGAAAAGGAAACTTC AGGAAATGTTAAGCACTCATTTAATGACAGATGAAAATTGGAATGCATTTAAACGAGAGTTTATAAACCAGCATACCGAT TTTTATAATGCGATAATGGAAAATTTTCCTGAACTAAAAGAATCCAATCTTAAAATAATAATGCTTCAAAAATTAGATTT TAATAATTATGAAATGTCTAATCTATTGGGTGTTACAATCGATGCTGTCAAAAAAAGCAAACAGCGGTTAAAGAAAAAAT TAGGGGATAAGTACGATCTGTTGTTTGAAATTATAGATTATAAATAG
Upstream 100 bases:
>100_bases ATTTTTTTGAAGAGATGTCAGAATATGCAACTGAAATTGGGTTAAAACATTCTTTTGAAGAAGAATCTGCTTGTAGGTAT TATTTTTTCTCGATAAATCT
Downstream 100 bases:
>100_bases CCTGCTGTTCATTGCAAATCTTATTTTAATGCACATAGTTTACGAGAAAAATCGTAACTTTTGTTTTTAAAAAGATTCTT GATTTTAAATATTTATTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MQYMKTPSSESAGVLNAIGNCYFRNKDLANAMHYLNKSEAMALKVGDSARYAKILGDKALIYEEKGNLKDAVHLLKQDIF YSQKFKIDKNEMYASILLAKILLKLKDTDKVEEILDRAGNIASSKSYYRSSLKEVIELKLSILNGRNPEKELLLRRQLKQ IDEYLLSTNGNTVLQRSHWLIQKKKYENDTNKIRLELEQGERMKKIYILILILTISLSIVLYHSLNKKLKAKRIKLENDR LLFEQKLNDASSDIDAYTEYLENKNKQISILENELEVIKTTTSRHLNDEKRKLQEMLSTHLMTDENWNAFKREFINQHTD FYNAIMENFPELKESNLKIIMLQKLDFNNYEMSNLLGVTIDAVKKSKQRLKKKLGDKYDLLFEIIDYK
Sequences:
>Translated_388_residues MQYMKTPSSESAGVLNAIGNCYFRNKDLANAMHYLNKSEAMALKVGDSARYAKILGDKALIYEEKGNLKDAVHLLKQDIF YSQKFKIDKNEMYASILLAKILLKLKDTDKVEEILDRAGNIASSKSYYRSSLKEVIELKLSILNGRNPEKELLLRRQLKQ IDEYLLSTNGNTVLQRSHWLIQKKKYENDTNKIRLELEQGERMKKIYILILILTISLSIVLYHSLNKKLKAKRIKLENDR LLFEQKLNDASSDIDAYTEYLENKNKQISILENELEVIKTTTSRHLNDEKRKLQEMLSTHLMTDENWNAFKREFINQHTD FYNAIMENFPELKESNLKIIMLQKLDFNNYEMSNLLGVTIDAVKKSKQRLKKKLGDKYDLLFEIIDYK >Mature_388_residues MQYMKTPSSESAGVLNAIGNCYFRNKDLANAMHYLNKSEAMALKVGDSARYAKILGDKALIYEEKGNLKDAVHLLKQDIF YSQKFKIDKNEMYASILLAKILLKLKDTDKVEEILDRAGNIASSKSYYRSSLKEVIELKLSILNGRNPEKELLLRRQLKQ IDEYLLSTNGNTVLQRSHWLIQKKKYENDTNKIRLELEQGERMKKIYILILILTISLSIVLYHSLNKKLKAKRIKLENDR LLFEQKLNDASSDIDAYTEYLENKNKQISILENELEVIKTTTSRHLNDEKRKLQEMLSTHLMTDENWNAFKREFINQHTD FYNAIMENFPELKESNLKIIMLQKLDFNNYEMSNLLGVTIDAVKKSKQRLKKKLGDKYDLLFEIIDYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45455; Mature: 45455
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYMKTPSSESAGVLNAIGNCYFRNKDLANAMHYLNKSEAMALKVGDSARYAKILGDKAL CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCEE IYEEKGNLKDAVHLLKQDIFYSQKFKIDKNEMYASILLAKILLKLKDTDKVEEILDRAGN EEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC IASSKSYYRSSLKEVIELKLSILNGRNPEKELLLRRQLKQIDEYLLSTNGNTVLQRSHWL CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH IQKKKYENDTNKIRLELEQGERMKKIYILILILTISLSIVLYHSLNKKLKAKRIKLENDR HHHHHCCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCH LLFEQKLNDASSDIDAYTEYLENKNKQISILENELEVIKTTTSRHLNDEKRKLQEMLSTH HHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LMTDENWNAFKREFINQHTDFYNAIMENFPELKESNLKIIMLQKLDFNNYEMSNLLGVTI CCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCEEEEEEECCCCCCCHHHHHHHHH DAVKKSKQRLKKKLGDKYDLLFEIIDYK HHHHHHHHHHHHHHCCHHHHHHHHHCCC >Mature Secondary Structure MQYMKTPSSESAGVLNAIGNCYFRNKDLANAMHYLNKSEAMALKVGDSARYAKILGDKAL CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCEE IYEEKGNLKDAVHLLKQDIFYSQKFKIDKNEMYASILLAKILLKLKDTDKVEEILDRAGN EEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC IASSKSYYRSSLKEVIELKLSILNGRNPEKELLLRRQLKQIDEYLLSTNGNTVLQRSHWL CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH IQKKKYENDTNKIRLELEQGERMKKIYILILILTISLSIVLYHSLNKKLKAKRIKLENDR HHHHHCCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCH LLFEQKLNDASSDIDAYTEYLENKNKQISILENELEVIKTTTSRHLNDEKRKLQEMLSTH HHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LMTDENWNAFKREFINQHTDFYNAIMENFPELKESNLKIIMLQKLDFNNYEMSNLLGVTI CCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCEEEEEEECCCCCCCHHHHHHHHH DAVKKSKQRLKKKLGDKYDLLFEIIDYK HHHHHHHHHHHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA