| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301974
Identifier: 146301974
GI number: 146301974
Start: 5106360
End: 5106833
Strand: Reverse
Name: 146301974
Synonym: Fjoh_4238
Alternate gene names: NA
Gene position: 5106833-5106360 (Counterclockwise)
Preceding gene: 146301975
Following gene: 146301973
Centisome position: 83.76
GC content: 33.76
Gene sequence:
>474_bases ATGAAACTATCAGAAATTAAAGAGATACTAAAAACTGTCGAAACAGTAAATTTTGAACTGCCAAACGGAAATTTTGTTCC AGAATATTTTCATGTAACCGAAGTAGGTTTAATTACCAAAAACTTTATTGACTGCGGTGGTACGGTAAGAAAAGAAACAA TGGTAAATTTTCAGCTTTGGAATGCCAACGATTATGAACACAGACTGAAACCGCAAAAACTGATTCACATTATCGAACTT TCTCAAAATGTTTTAGGCATTGAAGATCATGAAATAGAAGTTGAATATCAGGATACTACTATAGGTAAATACGATTTAGA TTTTAACGGTAAAAATTTCATTTTATTAAACAAGCAGACGGCTTGTCTGGCTCAGGAACAATGCGGTATTCCTTCTGAGA AACCCAAAATAAAATTGACACAGCTTCATACAGATAATTCAAATTCATGTACTCCGGGCGGTGGATGCTGTTAA
Upstream 100 bases:
>100_bases AACGAACCGGGTTTAGAAAAAATAAAAAGCTTTTTTGAGCATATTTCGGCTCATCTGGCTAAGAAAAGAAACGAATGTTG TTAACTAAAAAGAAAGTGTT
Downstream 100 bases:
>100_bases TTTTTTTAATAAACAATTACAACCATAAAATATGTTATTTCCAGAAATAGAAAAAACAGTTCAGTCTTTTGATTTTAATA AGATTTCAGACGATCGTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MKLSEIKEILKTVETVNFELPNGNFVPEYFHVTEVGLITKNFIDCGGTVRKETMVNFQLWNANDYEHRLKPQKLIHIIEL SQNVLGIEDHEIEVEYQDTTIGKYDLDFNGKNFILLNKQTACLAQEQCGIPSEKPKIKLTQLHTDNSNSCTPGGGCC
Sequences:
>Translated_157_residues MKLSEIKEILKTVETVNFELPNGNFVPEYFHVTEVGLITKNFIDCGGTVRKETMVNFQLWNANDYEHRLKPQKLIHIIEL SQNVLGIEDHEIEVEYQDTTIGKYDLDFNGKNFILLNKQTACLAQEQCGIPSEKPKIKLTQLHTDNSNSCTPGGGCC >Mature_157_residues MKLSEIKEILKTVETVNFELPNGNFVPEYFHVTEVGLITKNFIDCGGTVRKETMVNFQLWNANDYEHRLKPQKLIHIIEL SQNVLGIEDHEIEVEYQDTTIGKYDLDFNGKNFILLNKQTACLAQEQCGIPSEKPKIKLTQLHTDNSNSCTPGGGCC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17817; Mature: 17817
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSEIKEILKTVETVNFELPNGNFVPEYFHVTEVGLITKNFIDCGGTVRKETMVNFQLW CCHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCEEEEEEEEE NANDYEHRLKPQKLIHIIELSQNVLGIEDHEIEVEYQDTTIGKYDLDFNGKNFILLNKQT CCCCHHHHCCHHHHHHEEECCCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCH ACLAQEQCGIPSEKPKIKLTQLHTDNSNSCTPGGGCC HHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MKLSEIKEILKTVETVNFELPNGNFVPEYFHVTEVGLITKNFIDCGGTVRKETMVNFQLW CCHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCEEEEEEEEE NANDYEHRLKPQKLIHIIELSQNVLGIEDHEIEVEYQDTTIGKYDLDFNGKNFILLNKQT CCCCHHHHCCHHHHHHEEECCCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCH ACLAQEQCGIPSEKPKIKLTQLHTDNSNSCTPGGGCC HHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA