| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301973
Identifier: 146301973
GI number: 146301973
Start: 5105708
End: 5106328
Strand: Reverse
Name: 146301973
Synonym: Fjoh_4237
Alternate gene names: NA
Gene position: 5106328-5105708 (Counterclockwise)
Preceding gene: 146301974
Following gene: 146301970
Centisome position: 83.75
GC content: 28.18
Gene sequence:
>621_bases ATGTTATTTCCAGAAATAGAAAAAACAGTTCAGTCTTTTGATTTTAATAAGATTTCAGACGATCGTAAAGCTGTATTACA GCCTTTAATAGAATATATTCAAGATAAAGTAAATAACCAGGAACAGATTAACCTTAACTTTATTTGTACACATAATTCCA GAAGAAGTCATTTATCGCAGATATGGGCGCAGGCGGGGGATAATAAAGGAGTGTTTTTAAAGATGTCTAAAAGAAAATTT AAAAGCGATTTTGAATTTTCTGAAGATTCATTTTTGTTAGATAACGATAATGAGTCCAGCGATTTTGATCGTTCAATATT TGTTGTATATGATAAAGCTGAATTACTCGATTTTTTAAGATTAGAAAGAAAAGGAACAAATGTTATGCTTTTTTTGTTTG ATAAACAATTATTTAGCAGTTTGTCTTTTTTTAAAGAAATAGAAAATTTGGTTTTAATAGACGGCTCAAAAAGCAGGACA GAAATTTTTAAAGATTTAGCCTTGTATTTTAAAAGTAAATCTGAATTTATTCCAAAAATATCAGGTATAAAGTTTTTGAA GCCTTATGCAGATCAAGTGCAGTCTGATACTCTTCAAAAAGCTTTGTTTTTTATGATGTAG
Upstream 100 bases:
>100_bases AAAATAAAATTGACACAGCTTCATACAGATAATTCAAATTCATGTACTCCGGGCGGTGGATGCTGTTAATTTTTTTAATA AACAATTACAACCATAAAAT
Downstream 100 bases:
>100_bases GATATTTTGTTGTTAGTGTTTTGATAAAAAAAGGCGGTCCATATTATATGTCCGCCTTTTTTGTTGTTATTTTAATTTAT AAATTTCTGATCCGGCCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Protein Tyrosine Phosphatase; Low Molecular Weight Phosphatase Family Protein; ArsC-Like Arsenate Reductase
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MLFPEIEKTVQSFDFNKISDDRKAVLQPLIEYIQDKVNNQEQINLNFICTHNSRRSHLSQIWAQAGDNKGVFLKMSKRKF KSDFEFSEDSFLLDNDNESSDFDRSIFVVYDKAELLDFLRLERKGTNVMLFLFDKQLFSSLSFFKEIENLVLIDGSKSRT EIFKDLALYFKSKSEFIPKISGIKFLKPYADQVQSDTLQKALFFMM
Sequences:
>Translated_206_residues MLFPEIEKTVQSFDFNKISDDRKAVLQPLIEYIQDKVNNQEQINLNFICTHNSRRSHLSQIWAQAGDNKGVFLKMSKRKF KSDFEFSEDSFLLDNDNESSDFDRSIFVVYDKAELLDFLRLERKGTNVMLFLFDKQLFSSLSFFKEIENLVLIDGSKSRT EIFKDLALYFKSKSEFIPKISGIKFLKPYADQVQSDTLQKALFFMM >Mature_206_residues MLFPEIEKTVQSFDFNKISDDRKAVLQPLIEYIQDKVNNQEQINLNFICTHNSRRSHLSQIWAQAGDNKGVFLKMSKRKF KSDFEFSEDSFLLDNDNESSDFDRSIFVVYDKAELLDFLRLERKGTNVMLFLFDKQLFSSLSFFKEIENLVLIDGSKSRT EIFKDLALYFKSKSEFIPKISGIKFLKPYADQVQSDTLQKALFFMM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24216; Mature: 24216
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFPEIEKTVQSFDFNKISDDRKAVLQPLIEYIQDKVNNQEQINLNFICTHNSRRSHLSQ CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHH IWAQAGDNKGVFLKMSKRKFKSDFEFSEDSFLLDNDNESSDFDRSIFVVYDKAELLDFLR HHHHCCCCCCEEEEEHHHHHCCCCCCCCCCEEECCCCCCCCCCCEEEEEECHHHHHHHHH LERKGTNVMLFLFDKQLFSSLSFFKEIENLVLIDGSKSRTEIFKDLALYFKSKSEFIPKI HHCCCCEEEEEEECHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCHHHCCCC SGIKFLKPYADQVQSDTLQKALFFMM CCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLFPEIEKTVQSFDFNKISDDRKAVLQPLIEYIQDKVNNQEQINLNFICTHNSRRSHLSQ CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHH IWAQAGDNKGVFLKMSKRKFKSDFEFSEDSFLLDNDNESSDFDRSIFVVYDKAELLDFLR HHHHCCCCCCEEEEEHHHHHCCCCCCCCCCEEECCCCCCCCCCCEEEEEECHHHHHHHHH LERKGTNVMLFLFDKQLFSSLSFFKEIENLVLIDGSKSRTEIFKDLALYFKSKSEFIPKI HHCCCCEEEEEEECHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCHHHCCCC SGIKFLKPYADQVQSDTLQKALFFMM CCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA