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The map label for this gene is 146301944

Identifier: 146301944

GI number: 146301944

Start: 5058648

End: 5059037

Strand: Reverse

Name: 146301944

Synonym: Fjoh_4208

Alternate gene names: NA

Gene position: 5059037-5058648 (Counterclockwise)

Preceding gene: 146301945

Following gene: 146301942

Centisome position: 82.98

GC content: 28.46

Gene sequence:

>390_bases
ATGGCAACTTCAATAAAAAGTAAAATAAAAAGCATTAGAGAGTTAAAAAATTATACTCAGGAATATATGGCAGATCAACT
TGGTGTCACGCAGGCAGGTTATAGTAAAATTGAAAAAGGAAAAACCATTTTATCTTACGTCAAATTAGTTGAAATTGCGA
AGATTTTAGAAGTTAGTGTAGAAGATATTATTAGTTTCGACAGTCAGAGATATTTCAACAATTTTAATACCGTAAAAGGA
AACAGCAACAACGGAAATATATTAATTAATTCTAATAATGGAGAAGCCTTAAAGGAACTCTATGAAGATAAAATAAAACT
TCTGGAAAAGCTTTTAAACAAAACCGAGGAAGAATTAAACCGATATAAAAAGAAATTCGGTCAATTATAA

Upstream 100 bases:

>100_bases
GAAGCAGTATTTAGATTCCAAAATAAAAGTTATAGCTGCAATACCCCTAAGTTTAGTAGCGGCTGTTTCAGCTATATACG
CCCTTACCCAAATCAAACTT

Downstream 100 bases:

>100_bases
CAAAAAAACGAGGCTTAAGAGCCTCGTTTTTTTATTATATTTTTAAGATGTCTGATCATCAACAGCTGCATCCGGAGCAT
TTTTCTTAACAGATTCGATT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MATSIKSKIKSIRELKNYTQEYMADQLGVTQAGYSKIEKGKTILSYVKLVEIAKILEVSVEDIISFDSQRYFNNFNTVKG
NSNNGNILINSNNGEALKELYEDKIKLLEKLLNKTEEELNRYKKKFGQL

Sequences:

>Translated_129_residues
MATSIKSKIKSIRELKNYTQEYMADQLGVTQAGYSKIEKGKTILSYVKLVEIAKILEVSVEDIISFDSQRYFNNFNTVKG
NSNNGNILINSNNGEALKELYEDKIKLLEKLLNKTEEELNRYKKKFGQL
>Mature_128_residues
ATSIKSKIKSIRELKNYTQEYMADQLGVTQAGYSKIEKGKTILSYVKLVEIAKILEVSVEDIISFDSQRYFNNFNTVKGN
SNNGNILINSNNGEALKELYEDKIKLLEKLLNKTEEELNRYKKKFGQL

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14819; Mature: 14688

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSIKSKIKSIRELKNYTQEYMADQLGVTQAGYSKIEKGKTILSYVKLVEIAKILEVSV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDIISFDSQRYFNNFNTVKGNSNNGNILINSNNGEALKELYEDKIKLLEKLLNKTEEELN
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RYKKKFGQL
HHHHHHCCC
>Mature Secondary Structure 
ATSIKSKIKSIRELKNYTQEYMADQLGVTQAGYSKIEKGKTILSYVKLVEIAKILEVSV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDIISFDSQRYFNNFNTVKGNSNNGNILINSNNGEALKELYEDKIKLLEKLLNKTEEELN
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RYKKKFGQL
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA