| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301942
Identifier: 146301942
GI number: 146301942
Start: 5057598
End: 5058083
Strand: Reverse
Name: 146301942
Synonym: Fjoh_4206
Alternate gene names: NA
Gene position: 5058083-5057598 (Counterclockwise)
Preceding gene: 146301944
Following gene: 146301941
Centisome position: 82.96
GC content: 33.74
Gene sequence:
>486_bases ATGAAAAATTTAGTTATTTTATTAGCAGTTGCAATTCAGTTAACGTCTTGTAATTCGAAAAAAAAGGAAGATGAAATTGT AAAAACCGAAACAGATACAACAGCCGTAAAAACCGAAAACACTGCTGTTGCAAATGTTTTGGTATACGAAGGTTTACTGC CTTGTGCAGATTGCAGCGGTATTCAGACAGTTCTAAAAATTGATCTTGGAAACGGAACAATGGAAGACCAAAAGTTTGAA TTATCCAGCATCTATAAAGGAAAATCACCCGAAAAAGAGTTTGTAGAGAAAGGAAATTTCAACACCGAAAGAGGCCTGGA AAGTGATCCAAACGGCACAACTTTTATTCTAAATTGGGACAAACCAGCCGAGAAACAAATTTATTACGGCTATTTTAGTT CAGATACCAAAAAGATTTATATGCTCGACCGAAGCAAAAAAATAATAAAATCGAAACTCAATTATTCCTTAGAACTTAAG AAATAA
Upstream 100 bases:
>100_bases TCGTTTTTAATTTGTTAAGTATTAGGCCTGAGAATAGAAGCTTTTGAATAATAACGTAAGAAAATTTGGTATATTTGAAA GAATAATAAATCTAAAGAAC
Downstream 100 bases:
>100_bases CAAAGCCCGATTTTTAAATTCAAAATATTATAAACTTAAACACACTCGTTAAGTTTATAATATTTTTTTATTTTTAAAGT ATGAAAGCGTCATCAATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MKNLVILLAVAIQLTSCNSKKKEDEIVKTETDTTAVKTENTAVANVLVYEGLLPCADCSGIQTVLKIDLGNGTMEDQKFE LSSIYKGKSPEKEFVEKGNFNTERGLESDPNGTTFILNWDKPAEKQIYYGYFSSDTKKIYMLDRSKKIIKSKLNYSLELK K
Sequences:
>Translated_161_residues MKNLVILLAVAIQLTSCNSKKKEDEIVKTETDTTAVKTENTAVANVLVYEGLLPCADCSGIQTVLKIDLGNGTMEDQKFE LSSIYKGKSPEKEFVEKGNFNTERGLESDPNGTTFILNWDKPAEKQIYYGYFSSDTKKIYMLDRSKKIIKSKLNYSLELK K >Mature_161_residues MKNLVILLAVAIQLTSCNSKKKEDEIVKTETDTTAVKTENTAVANVLVYEGLLPCADCSGIQTVLKIDLGNGTMEDQKFE LSSIYKGKSPEKEFVEKGNFNTERGLESDPNGTTFILNWDKPAEKQIYYGYFSSDTKKIYMLDRSKKIIKSKLNYSLELK K
Specific function: Unknown
COG id: COG3015
COG function: function code MP; Uncharacterized lipoprotein NlpE involved in copper resistance
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18121; Mature: 18121
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLVILLAVAIQLTSCNSKKKEDEIVKTETDTTAVKTENTAVANVLVYEGLLPCADCSG CCCCEEEEEEHHHHCCCCCCCCCCCEEEECCCCEEEEECCCHHHHHEEHHCCCCCCCCCC IQTVLKIDLGNGTMEDQKFELSSIYKGKSPEKEFVEKGNFNTERGLESDPNGTTFILNWD CEEEEEEECCCCCCCCCEEHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEECC KPAEKQIYYGYFSSDTKKIYMLDRSKKIIKSKLNYSLELKK CCCCCEEEEEEECCCCEEEEEEECCHHHHHHHCCEEEEECC >Mature Secondary Structure MKNLVILLAVAIQLTSCNSKKKEDEIVKTETDTTAVKTENTAVANVLVYEGLLPCADCSG CCCCEEEEEEHHHHCCCCCCCCCCCEEEECCCCEEEEECCCHHHHHEEHHCCCCCCCCCC IQTVLKIDLGNGTMEDQKFELSSIYKGKSPEKEFVEKGNFNTERGLESDPNGTTFILNWD CEEEEEEECCCCCCCCCEEHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEECC KPAEKQIYYGYFSSDTKKIYMLDRSKKIIKSKLNYSLELKK CCCCCEEEEEEECCCCEEEEEEECCHHHHHHHCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA