| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is purR [C]
Identifier: 146301924
GI number: 146301924
Start: 5028913
End: 5029911
Strand: Reverse
Name: purR [C]
Synonym: Fjoh_4188
Alternate gene names: 146301924
Gene position: 5029911-5028913 (Counterclockwise)
Preceding gene: 146301936
Following gene: 146301922
Centisome position: 82.5
GC content: 34.13
Gene sequence:
>999_bases TTGGCAAATGTTTCTCCCGGAACTATTGACAGGATTATTCATAAACGCGGACAGGTGGCTCAGGAAACTGTAGACAAGGT TAATGCGATTATTGAAGAGTTTGGTTATAAGCGAAATATCCTGGCTAGTAATCTGGCTTTAAACAAAAAATTTCATTTTG CGGTTTTTCTTCCTAAGTCCGAAACTTTGGAATATTGGCAGAGCCAGACGGACGGAATCGAAAAAGCGGCTTTGGAATTT GGTAAATTCGGGATTGTATTGGATTATTTCTTTTACGATTATAATCTGGCTTCTTTTAAGGAATCTGTCAAAAAAGTAAT GGAATTTGACTGCGATGGTTTGTTGTTTGCGCCTATTTTTTATGAAGATTCGGTTCGGTTTTTAAAAGATTACGAAAGCA AAAACATTCCGATTGTAATGATCGATTCGAATATTTCTGAAGAAAATGAACACGCTTATGTGGGTCAAAATGCTTTTCAG AGTGGTTATTTAGCCGGAAGGCTCATCAGCTTTGCCGTTAAAAATGAAAGGCATGTTTTGATTTTTAAAATTACCCGCGA AATCGAAAGTACATCAGTTTATCAGCAGAGAATTAAAGGATTTTATTCGTATTTTAAAGATCACGATGAATTGACGAATT TTAATTTTTCAGAATTCACCTTAAAAGATTCCGGAATCGACCAGCTGAATCTTGAAATGTTTTCTGGGGTAAACAGCATT TTTGTACCCAATTCGCGAGCGTATATTGTGGCCGAATTTTTAGAAAAGAACAATATAAAAGGTGTTCGAATTATTGGTTT TGATTTACTTAAGGAAAATATAGAATATCTAAATAAAGGCGTTATTGATTTTTTAATTAATCAAAGACCCGAAGATCAGG GTTATATGGGAATTAATTATTTGTATAAAAAACTGGTGCTGCAGGAAGATACAGAACGCACACATTATATTCCGCTTGAG ATTATTTTAAAAGAAAATTATTTTCCTGCTAAGAAGTGA
Upstream 100 bases:
>100_bases AACAACTTATTTTTGCTAAAAAAATATAATTTTACAAAGGAGCTTTTATTATTTTAACTTAAAAAGAATCAATATCATAA CAATTAAAAAAATAGCCGAA
Downstream 100 bases:
>100_bases TTTAATCTAAACCACAGATTTTACGGATTAGGCAGGTTTATTTTAAAATAAGCTGCATCAATCCGTTTCATCCGTAAAAT CTGCGGGTAATGATTATTAT
Product: regulatory protein LacI
Products: NA
Alternate protein names: Transcriptional Regulator LacI Family; Regulatory Protein LacI; LacI Family Transcriptional Regulator; Regulatory Protein LacI Family; Transcriptional Regulatory Protein; Transcriptional Regulator Laci Family; Sugar ABC Transporter Periplasmic Protein; LacI-Family Transcriptional Regulator; LacI Family Transcription Regulator
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MANVSPGTIDRIIHKRGQVAQETVDKVNAIIEEFGYKRNILASNLALNKKFHFAVFLPKSETLEYWQSQTDGIEKAALEF GKFGIVLDYFFYDYNLASFKESVKKVMEFDCDGLLFAPIFYEDSVRFLKDYESKNIPIVMIDSNISEENEHAYVGQNAFQ SGYLAGRLISFAVKNERHVLIFKITREIESTSVYQQRIKGFYSYFKDHDELTNFNFSEFTLKDSGIDQLNLEMFSGVNSI FVPNSRAYIVAEFLEKNNIKGVRIIGFDLLKENIEYLNKGVIDFLINQRPEDQGYMGINYLYKKLVLQEDTERTHYIPLE IILKENYFPAKK
Sequences:
>Translated_332_residues MANVSPGTIDRIIHKRGQVAQETVDKVNAIIEEFGYKRNILASNLALNKKFHFAVFLPKSETLEYWQSQTDGIEKAALEF GKFGIVLDYFFYDYNLASFKESVKKVMEFDCDGLLFAPIFYEDSVRFLKDYESKNIPIVMIDSNISEENEHAYVGQNAFQ SGYLAGRLISFAVKNERHVLIFKITREIESTSVYQQRIKGFYSYFKDHDELTNFNFSEFTLKDSGIDQLNLEMFSGVNSI FVPNSRAYIVAEFLEKNNIKGVRIIGFDLLKENIEYLNKGVIDFLINQRPEDQGYMGINYLYKKLVLQEDTERTHYIPLE IILKENYFPAKK >Mature_331_residues ANVSPGTIDRIIHKRGQVAQETVDKVNAIIEEFGYKRNILASNLALNKKFHFAVFLPKSETLEYWQSQTDGIEKAALEFG KFGIVLDYFFYDYNLASFKESVKKVMEFDCDGLLFAPIFYEDSVRFLKDYESKNIPIVMIDSNISEENEHAYVGQNAFQS GYLAGRLISFAVKNERHVLIFKITREIESTSVYQQRIKGFYSYFKDHDELTNFNFSEFTLKDSGIDQLNLEMFSGVNSIF VPNSRAYIVAEFLEKNNIKGVRIIGFDLLKENIEYLNKGVIDFLINQRPEDQGYMGINYLYKKLVLQEDTERTHYIPLEI ILKENYFPAKK
Specific function: Repressor That Binds To The Purf Operator And Coregulates Other Genes For De Novo Purine Nucleotide Synthesis. It Is Involved In Regulation Of Purb, Purc, Purek, Purhd, Purl, Purmn And Guaba Expression. Binds Hypoxanthine And Guanine As Inducers. [C]
COG id: COG1879
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38597; Mature: 38466
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANVSPGTIDRIIHKRGQVAQETVDKVNAIIEEFGYKRNILASNLALNKKFHFAVFLPKS CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHEECCEEEEEEECCCH ETLEYWQSQTDGIEKAALEFGKFGIVLDYFFYDYNLASFKESVKKVMEFDCDGLLFAPIF HHHHHHHHHCCHHHHHHHHHCCHHHEEEHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEE YEDSVRFLKDYESKNIPIVMIDSNISEENEHAYVGQNAFQSGYLAGRLISFAVKNERHVL ECHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEECCHHHHCCHHHHHHHHHEECCCCEEE IFKITREIESTSVYQQRIKGFYSYFKDHDELTNFNFSEFTLKDSGIDQLNLEMFSGVNSI EEEEEHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEECCCCCCCCCHHHHCCCCEE FVPNSRAYIVAEFLEKNNIKGVRIIGFDLLKENIEYLNKGVIDFLINQRPEDQGYMGINY EECCCCCEEHEEHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH LYKKLVLQEDTERTHYIPLEIILKENYFPAKK HHHHHHHCCCCCCCEEEEEEEEEECCCCCCCC >Mature Secondary Structure ANVSPGTIDRIIHKRGQVAQETVDKVNAIIEEFGYKRNILASNLALNKKFHFAVFLPKS CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHEECCEEEEEEECCCH ETLEYWQSQTDGIEKAALEFGKFGIVLDYFFYDYNLASFKESVKKVMEFDCDGLLFAPIF HHHHHHHHHCCHHHHHHHHHCCHHHEEEHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEE YEDSVRFLKDYESKNIPIVMIDSNISEENEHAYVGQNAFQSGYLAGRLISFAVKNERHVL ECHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEECCHHHHCCHHHHHHHHHEECCCCEEE IFKITREIESTSVYQQRIKGFYSYFKDHDELTNFNFSEFTLKDSGIDQLNLEMFSGVNSI EEEEEHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEECCCCCCCCCHHHHCCCCEE FVPNSRAYIVAEFLEKNNIKGVRIIGFDLLKENIEYLNKGVIDFLINQRPEDQGYMGINY EECCCCCEEHEEHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH LYKKLVLQEDTERTHYIPLEIILKENYFPAKK HHHHHHHCCCCCCCEEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA