| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yjdJ [C]
Identifier: 146301916
GI number: 146301916
Start: 5022729
End: 5023025
Strand: Direct
Name: yjdJ [C]
Synonym: Fjoh_4180
Alternate gene names: 146301916
Gene position: 5022729-5023025 (Clockwise)
Preceding gene: 146301915
Following gene: 146301917
Centisome position: 82.38
GC content: 34.01
Gene sequence:
>297_bases ATGGAAATAATAAAATTAGAATTAAACGAAAAAAACCACGGCAGTTTTAATTTGTATGTTGATGATAAAAAATTAGGCGA AATGACAGTAAGCATTAAACCCGGCCTGCTGACAGTTTACCATACAGGAGTTGAACCCGAAGGTGAAGGAAAAGGTTATG CTAAGAAACTTTTAGAAGAAATGGTTTCTTATGTTCGTGCCAATAATTTAAAAGTTTTACCGCTTTGTCCTTACGTTCAC GCTCAATTTAAAAGACATCCGGATGAATATGAAGATATCTGGCAGAAACAATCTTAA
Upstream 100 bases:
>100_bases TATAAAATAAATCAATACAGACTGCCTGTAAAGAATTATAATTACAGGCAGTTTAATTTTCTCTCTTAAAAATTACAAAC AAGCACACATTCAAAATACT
Downstream 100 bases:
>100_bases AAACAGAATAGTTATGAATACAGAAATTTTAACAGACGGTGTACCTTTAAATGAAGCTAAAAAAGCTTTAATTATGATTC ACGGCCGTGGTGCCGGTGCT
Product: acetyltransferase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MEIIKLELNEKNHGSFNLYVDDKKLGEMTVSIKPGLLTVYHTGVEPEGEGKGYAKKLLEEMVSYVRANNLKVLPLCPYVH AQFKRHPDEYEDIWQKQS
Sequences:
>Translated_98_residues MEIIKLELNEKNHGSFNLYVDDKKLGEMTVSIKPGLLTVYHTGVEPEGEGKGYAKKLLEEMVSYVRANNLKVLPLCPYVH AQFKRHPDEYEDIWQKQS >Mature_98_residues MEIIKLELNEKNHGSFNLYVDDKKLGEMTVSIKPGLLTVYHTGVEPEGEGKGYAKKLLEEMVSYVRANNLKVLPLCPYVH AQFKRHPDEYEDIWQKQS
Specific function: Unknown
COG id: COG2388
COG function: function code R; Predicted acetyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11321; Mature: 11321
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIIKLELNEKNHGSFNLYVDDKKLGEMTVSIKPGLLTVYHTGVEPEGEGKGYAKKLLEE CEEEEEEECCCCCCEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHH MVSYVRANNLKVLPLCPYVHAQFKRHPDEYEDIWQKQS HHHHHHCCCEEEEEECHHHHHHHHCCCCHHHHHHCCCC >Mature Secondary Structure MEIIKLELNEKNHGSFNLYVDDKKLGEMTVSIKPGLLTVYHTGVEPEGEGKGYAKKLLEE CEEEEEEECCCCCCEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHH MVSYVRANNLKVLPLCPYVHAQFKRHPDEYEDIWQKQS HHHHHHCCCEEEEEECHHHHHHHHCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA