| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301887
Identifier: 146301887
GI number: 146301887
Start: 4983803
End: 4984273
Strand: Reverse
Name: 146301887
Synonym: Fjoh_4151
Alternate gene names: NA
Gene position: 4984273-4983803 (Counterclockwise)
Preceding gene: 146301888
Following gene: 146301886
Centisome position: 81.75
GC content: 30.79
Gene sequence:
>471_bases ATGTTTATTATGGCAAATACATATACACAGCTGCATGTTCAATTTGTTTTTGCAGTGAAATATAGAAAAGCATTAATCAC AAAAGATTGGAAGGAAAGATTACATCAATATATAACTGGAATAATTCAGAGCAATCAACACAAAATGTTGTGTATAAACA GTATGCCCGATCATATCCATATATTTATAGGCATGAGGCCCACACAATCTATTTCGTCTCTTATTCAGAATATCAAAACA GAAACAAGCAAATGGATTAAAGAGCAAAAATTAGCATCATATTTTGCGTGGCAGGAAGGTTATGGTGCTTTTTCTTATTC CAGAAGTCATGTTCCCAGTGTGATTCGATACATACAAAATCAAGAAGAACACCATAAAAAAGAAACGTTTTTAGAAGAAT ATCAAAAGTTTTTAAAGGTATTTGAAGTAGAATATGATGAGCAGTATATTTTTAAAGAACCTATAGATTAG
Upstream 100 bases:
>100_bases TATCGGAAAAATGTTCCGCTAGGAACATCTCGTCGGTAGAAAAAAAAATAATTCGCAATAATTTTACGTTCCGTAGGAAC GTTTGATTAGTATCAATAGA
Downstream 100 bases:
>100_bases TGATTTCAAACGTTCCTACGGAACGATATGAACCTAAGCAGTTATTGGTGTTACCAACGATATGTTCCTAACGGAACATA AGGTTATATATCTGTTTTAA
Product: transposase IS200-family protein
Products: NA
Alternate protein names: Transposase IS
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MFIMANTYTQLHVQFVFAVKYRKALITKDWKERLHQYITGIIQSNQHKMLCINSMPDHIHIFIGMRPTQSISSLIQNIKT ETSKWIKEQKLASYFAWQEGYGAFSYSRSHVPSVIRYIQNQEEHHKKETFLEEYQKFLKVFEVEYDEQYIFKEPID
Sequences:
>Translated_156_residues MFIMANTYTQLHVQFVFAVKYRKALITKDWKERLHQYITGIIQSNQHKMLCINSMPDHIHIFIGMRPTQSISSLIQNIKT ETSKWIKEQKLASYFAWQEGYGAFSYSRSHVPSVIRYIQNQEEHHKKETFLEEYQKFLKVFEVEYDEQYIFKEPID >Mature_156_residues MFIMANTYTQLHVQFVFAVKYRKALITKDWKERLHQYITGIIQSNQHKMLCINSMPDHIHIFIGMRPTQSISSLIQNIKT ETSKWIKEQKLASYFAWQEGYGAFSYSRSHVPSVIRYIQNQEEHHKKETFLEEYQKFLKVFEVEYDEQYIFKEPID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18820; Mature: 18820
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIMANTYTQLHVQFVFAVKYRKALITKDWKERLHQYITGIIQSNQHKMLCINSMPDHIH CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEE IFIGMRPTQSISSLIQNIKTETSKWIKEQKLASYFAWQEGYGAFSYSRSHVPSVIRYIQN EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC QEEHHKKETFLEEYQKFLKVFEVEYDEQYIFKEPID HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MFIMANTYTQLHVQFVFAVKYRKALITKDWKERLHQYITGIIQSNQHKMLCINSMPDHIH CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEE IFIGMRPTQSISSLIQNIKTETSKWIKEQKLASYFAWQEGYGAFSYSRSHVPSVIRYIQN EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC QEEHHKKETFLEEYQKFLKVFEVEYDEQYIFKEPID HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA