| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301886
Identifier: 146301886
GI number: 146301886
Start: 4982392
End: 4983336
Strand: Reverse
Name: 146301886
Synonym: Fjoh_4150
Alternate gene names: NA
Gene position: 4983336-4982392 (Counterclockwise)
Preceding gene: 146301887
Following gene: 146301885
Centisome position: 81.74
GC content: 34.18
Gene sequence:
>945_bases ATGTCAAACGCAGAAAGCATTATAAACGTAATAGACACGTTTTTAGATAAATTTTCATTAAAAACAAACAAACTGACCAA ACAAGATTTGATTAGTTTTATTGAAGAAAAATGGGCAGAAGCCGATGATGAAAAATACAATATTTATCAGGCCTATATCA TTACCGGCAGAATGACCAATGAATATATCTGGGCAAAAGATTTCCCGAATATGAAACGCTGGCTTGATATGAATGACCGT CATTCAGCTTCGGGCAGAAACGAACCTTACATTCGAAATTATTACAAAGGACAATGCTGTTTAGAATGTGGTAACGAAGA AAAAGCGTTAGAATATTTCAATTTGTGTTATAACGAAAATCCCGATTATATATTTACAAGAGCACCTTTTTGTTATGAAT TTTTCAATAAACATTTAGAAAATCCACGTGAACTTCCAAAACAGGAAGAAGGTCAGGATGATTATTTCGAATGGGTTGAA TTAGAAGAATGGCAGTCATTTTTTAATGAAGAAGAATCGGAAATACAATGTGAAATATTATTTGATGATGACGAGGAAGA AGAATTCAGGGAAGAACACGAAAATGGAATCGAATATCTTGAAAACAATCAAACTGAAATACTGGAAAGTATTCTAACAG AATTACTAAAAGTATATCCCGACTGGCAGAAAGACTATGGTTACAGTGAAGAAGACAAACCCGATTTTATGCCGGATGTA ACAACCATAAAAGATTTTGCAAATTTGATATCGCCAACATCGATTTATGTCACATCTGTTTTTAAAGACGATCTGCCGTA CATTGGTTTTCTTTTCTCCTGTTCATGGGACAGCGAACACGGCTTGGGCGTGATGACACATAAAAACAGAATTGTTGAAA TAGGAGGTGCCGATACCGCATTTTTAACTTGGATTGCCGAAAAGGATAATAATAAAAGCAAATAA
Upstream 100 bases:
>100_bases ATTAAATGTTCCGTTAAGAACATCATATATAGAAAAAGCATATCGAAAAAATGTTCCGTTAGGAACATCTCGTTGGTAGT AAAATCATTAAATAGAAAAA
Downstream 100 bases:
>100_bases ATTGACCATAAAACTAAACCAAATGAAAAAAGAAACATTTGATATAATAGAATTACGTCCGGCTACCAAACATTATTATG GAGACAGTTTAAAAATGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MSNAESIINVIDTFLDKFSLKTNKLTKQDLISFIEEKWAEADDEKYNIYQAYIITGRMTNEYIWAKDFPNMKRWLDMNDR HSASGRNEPYIRNYYKGQCCLECGNEEKALEYFNLCYNENPDYIFTRAPFCYEFFNKHLENPRELPKQEEGQDDYFEWVE LEEWQSFFNEEESEIQCEILFDDDEEEEFREEHENGIEYLENNQTEILESILTELLKVYPDWQKDYGYSEEDKPDFMPDV TTIKDFANLISPTSIYVTSVFKDDLPYIGFLFSCSWDSEHGLGVMTHKNRIVEIGGADTAFLTWIAEKDNNKSK
Sequences:
>Translated_314_residues MSNAESIINVIDTFLDKFSLKTNKLTKQDLISFIEEKWAEADDEKYNIYQAYIITGRMTNEYIWAKDFPNMKRWLDMNDR HSASGRNEPYIRNYYKGQCCLECGNEEKALEYFNLCYNENPDYIFTRAPFCYEFFNKHLENPRELPKQEEGQDDYFEWVE LEEWQSFFNEEESEIQCEILFDDDEEEEFREEHENGIEYLENNQTEILESILTELLKVYPDWQKDYGYSEEDKPDFMPDV TTIKDFANLISPTSIYVTSVFKDDLPYIGFLFSCSWDSEHGLGVMTHKNRIVEIGGADTAFLTWIAEKDNNKSK >Mature_313_residues SNAESIINVIDTFLDKFSLKTNKLTKQDLISFIEEKWAEADDEKYNIYQAYIITGRMTNEYIWAKDFPNMKRWLDMNDRH SASGRNEPYIRNYYKGQCCLECGNEEKALEYFNLCYNENPDYIFTRAPFCYEFFNKHLENPRELPKQEEGQDDYFEWVEL EEWQSFFNEEESEIQCEILFDDDEEEEFREEHENGIEYLENNQTEILESILTELLKVYPDWQKDYGYSEEDKPDFMPDVT TIKDFANLISPTSIYVTSVFKDDLPYIGFLFSCSWDSEHGLGVMTHKNRIVEIGGADTAFLTWIAEKDNNKSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37376; Mature: 37244
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAESIINVIDTFLDKFSLKTNKLTKQDLISFIEEKWAEADDEKYNIYQAYIITGRMTN CCCHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCC EYIWAKDFPNMKRWLDMNDRHSASGRNEPYIRNYYKGQCCLECGNEEKALEYFNLCYNEN CEEEECCCCCHHHHCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHCCC PDYIFTRAPFCYEFFNKHLENPRELPKQEEGQDDYFEWVELEEWQSFFNEEESEIQCEIL CCEEEECCCHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE FDDDEEEEFREEHENGIEYLENNQTEILESILTELLKVYPDWQKDYGYSEEDKPDFMPDV ECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCH TTIKDFANLISPTSIYVTSVFKDDLPYIGFLFSCSWDSEHGLGVMTHKNRIVEIGGADTA HHHHHHHHHCCCCHHEEEHHHHCCCCCEEEEEEECCCCCCCCEEEEECCEEEEECCCCEE FLTWIAEKDNNKSK EEEEEEECCCCCCC >Mature Secondary Structure SNAESIINVIDTFLDKFSLKTNKLTKQDLISFIEEKWAEADDEKYNIYQAYIITGRMTN CCHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCC EYIWAKDFPNMKRWLDMNDRHSASGRNEPYIRNYYKGQCCLECGNEEKALEYFNLCYNEN CEEEECCCCCHHHHCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHCCC PDYIFTRAPFCYEFFNKHLENPRELPKQEEGQDDYFEWVELEEWQSFFNEEESEIQCEIL CCEEEECCCHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE FDDDEEEEFREEHENGIEYLENNQTEILESILTELLKVYPDWQKDYGYSEEDKPDFMPDV ECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCH TTIKDFANLISPTSIYVTSVFKDDLPYIGFLFSCSWDSEHGLGVMTHKNRIVEIGGADTA HHHHHHHHHCCCCHHEEEHHHHCCCCCEEEEEEECCCCCCCCEEEEECCEEEEECCCCEE FLTWIAEKDNNKSK EEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA