| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301883
Identifier: 146301883
GI number: 146301883
Start: 4980207
End: 4980800
Strand: Reverse
Name: 146301883
Synonym: Fjoh_4147
Alternate gene names: NA
Gene position: 4980800-4980207 (Counterclockwise)
Preceding gene: 146301884
Following gene: 146301882
Centisome position: 81.69
GC content: 36.2
Gene sequence:
>594_bases ATGGCGGTATATAAATTCGACGAAGTACTAAATGACCTAATGGATTATTTTATTCTGGGCGATCCAGATTATCTGCTTCA ATACAAAATAGAAAATGACCTGCCGGATGATCTGCTGACGGAATTCACAACAGAAGAAACCGGAGATCAGGTTGTAGAAC AAGGCGTAATTGTGCCAATGATAGGAATAGAAAATTATCCTTATACCATTTATTTCAATTTATCAGACGAAACGCCAGAG TTGTTAAAAGCAGAAAATGAAGTACAGCACCAGCGTGACGGATATTGTTTAAAAGTTGTAAATGGCAGAATATACCTGTA TACGATTCCGTATTTGAGAGATTTTACAGAAACCAAAGTCGGATTATTAAAGAAATACAAACACGCATCAATAGAACTGC CAAACGGCTGGTATACAGTTACTATTCTGGCCGGATTAACCAAACAGCTTTTGGAAGCAGAAATGGTTTCGGGAAAAATA GAAGAATTTGAAAGCATGGAACCTACTTTTGAATTTGTGCTAAAACCTTCTGCTGAAAAACCAGAGTATGCAGCTGATTT TACATATCCATTTAAAGTTGAAATAGATGAATAG
Upstream 100 bases:
>100_bases GCCTGACCGATTTTCATTTTAAAGTTATGGATGAAAGAGGATATGCTTTTGATAAGGAATACAGTTATTATATGGGAAAA AGAACTAAAATCTAAAAACA
Downstream 100 bases:
>100_bases ACAGATACCAATTGAAGAACTGAATCAGAATACTTTTTTCTGGAATTTTTATTTCTGCTGGTCAAGAGGCTATGATGAAA AACAAGAAATAAATATTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MAVYKFDEVLNDLMDYFILGDPDYLLQYKIENDLPDDLLTEFTTEETGDQVVEQGVIVPMIGIENYPYTIYFNLSDETPE LLKAENEVQHQRDGYCLKVVNGRIYLYTIPYLRDFTETKVGLLKKYKHASIELPNGWYTVTILAGLTKQLLEAEMVSGKI EEFESMEPTFEFVLKPSAEKPEYAADFTYPFKVEIDE
Sequences:
>Translated_197_residues MAVYKFDEVLNDLMDYFILGDPDYLLQYKIENDLPDDLLTEFTTEETGDQVVEQGVIVPMIGIENYPYTIYFNLSDETPE LLKAENEVQHQRDGYCLKVVNGRIYLYTIPYLRDFTETKVGLLKKYKHASIELPNGWYTVTILAGLTKQLLEAEMVSGKI EEFESMEPTFEFVLKPSAEKPEYAADFTYPFKVEIDE >Mature_196_residues AVYKFDEVLNDLMDYFILGDPDYLLQYKIENDLPDDLLTEFTTEETGDQVVEQGVIVPMIGIENYPYTIYFNLSDETPEL LKAENEVQHQRDGYCLKVVNGRIYLYTIPYLRDFTETKVGLLKKYKHASIELPNGWYTVTILAGLTKQLLEAEMVSGKIE EFESMEPTFEFVLKPSAEKPEYAADFTYPFKVEIDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22863; Mature: 22732
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVYKFDEVLNDLMDYFILGDPDYLLQYKIENDLPDDLLTEFTTEETGDQVVEQGVIVPM CCEEHHHHHHHHHHHHEECCCCCEEEEEEECCCCCHHHHHHHCCCCHHHHHHHCCCEEEE IGIENYPYTIYFNLSDETPELLKAENEVQHQRDGYCLKVVNGRIYLYTIPYLRDFTETKV EECCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCHHHHHHHHHH GLLKKYKHASIELPNGWYTVTILAGLTKQLLEAEMVSGKIEEFESMEPTFEFVLKPSAEK HHHHHHCCCEEECCCCEEEEHHHHHHHHHHHHHHHHHCHHHHHHCCCCCEEEEECCCCCC PEYAADFTYPFKVEIDE CCCCCCCCCEEEEEECC >Mature Secondary Structure AVYKFDEVLNDLMDYFILGDPDYLLQYKIENDLPDDLLTEFTTEETGDQVVEQGVIVPM CEEHHHHHHHHHHHHEECCCCCEEEEEEECCCCCHHHHHHHCCCCHHHHHHHCCCEEEE IGIENYPYTIYFNLSDETPELLKAENEVQHQRDGYCLKVVNGRIYLYTIPYLRDFTETKV EECCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCHHHHHHHHHH GLLKKYKHASIELPNGWYTVTILAGLTKQLLEAEMVSGKIEEFESMEPTFEFVLKPSAEK HHHHHHCCCEEECCCCEEEEHHHHHHHHHHHHHHHHHCHHHHHHCCCCCEEEEECCCCCC PEYAADFTYPFKVEIDE CCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA