| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301881
Identifier: 146301881
GI number: 146301881
Start: 4978814
End: 4979290
Strand: Reverse
Name: 146301881
Synonym: Fjoh_4145
Alternate gene names: NA
Gene position: 4979290-4978814 (Counterclockwise)
Preceding gene: 146301882
Following gene: 146301880
Centisome position: 81.67
GC content: 34.8
Gene sequence:
>477_bases ATGAAAATCAAGTCTTTTTTGTATCTATTTCTGTTTGGTGTTTTTTCGATTTCAGCTTACAGTCAGAATGTGAAGCTGTT AAACATCGATCAGCTGAACGAACGAATTAAAAATGGAAAAGACAGCACGTATGTTGTGAATTTTTGGGCAACCTGGTGCG CGCCATGCATTAAAGAACTGCCGCATTTTGAAAAACTAAGCGCCGAACACAAATCAGAAAAACTGGCTGTTTTATTAGTA AGTCTGGATTTCAAATCAAAGCTGGCATCGAATGTTGTTCCGTTTGTAAAAAGAAAAAACCTGAAAAACGAAGTATTTCT TTTAAACGAAAGCAGTCCGCAGGAATTTATAGATAGAATTGACCCAAACTGGTCTGGAAGTATTCCGGCAACACTTTTTA TCAAAAACGATAAACGAAAATTTGTAGAAAGCGAATTTACCTACGAACAATTATTAACTGAATATAAAAAACTGTAA
Upstream 100 bases:
>100_bases AGAACCTCAAAAAAACTCCATTAAACTTTTATTAACAAAAAGTAAGATTCCATTAGTTTATATTTGTAAGGCACAAATTA ATCCTAAAGCGTTGTACCTC
Downstream 100 bases:
>100_bases ACCATGAAAAAAATAATCTTATTACTAACATTGGCATTTTCTGCCTTTTTAGCTCAGGCTCAAACAGGAACAACACTTAA AGCCGGAGATACTGCACCAG
Product: redoxin domain-containing protein
Products: NA
Alternate protein names: Redoxin Domain Protein; Thioredoxin Family Protein; ThiolDisulfide Interchange Protein TlpA; Redoxin; Thioredoxin-Related Transmembrane Protein; Thioredoxin-Like Protein
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MKIKSFLYLFLFGVFSISAYSQNVKLLNIDQLNERIKNGKDSTYVVNFWATWCAPCIKELPHFEKLSAEHKSEKLAVLLV SLDFKSKLASNVVPFVKRKNLKNEVFLLNESSPQEFIDRIDPNWSGSIPATLFIKNDKRKFVESEFTYEQLLTEYKKL
Sequences:
>Translated_158_residues MKIKSFLYLFLFGVFSISAYSQNVKLLNIDQLNERIKNGKDSTYVVNFWATWCAPCIKELPHFEKLSAEHKSEKLAVLLV SLDFKSKLASNVVPFVKRKNLKNEVFLLNESSPQEFIDRIDPNWSGSIPATLFIKNDKRKFVESEFTYEQLLTEYKKL >Mature_158_residues MKIKSFLYLFLFGVFSISAYSQNVKLLNIDQLNERIKNGKDSTYVVNFWATWCAPCIKELPHFEKLSAEHKSEKLAVLLV SLDFKSKLASNVVPFVKRKNLKNEVFLLNESSPQEFIDRIDPNWSGSIPATLFIKNDKRKFVESEFTYEQLLTEYKKL
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18421; Mature: 18421
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKSFLYLFLFGVFSISAYSQNVKLLNIDQLNERIKNGKDSTYVVNFWATWCAPCIKEL CCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHC PHFEKLSAEHKSEKLAVLLVSLDFKSKLASNVVPFVKRKNLKNEVFLLNESSPQEFIDRI CCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHC DPNWSGSIPATLFIKNDKRKFVESEFTYEQLLTEYKKL CCCCCCCCCEEEEEECCHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure MKIKSFLYLFLFGVFSISAYSQNVKLLNIDQLNERIKNGKDSTYVVNFWATWCAPCIKEL CCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHC PHFEKLSAEHKSEKLAVLLVSLDFKSKLASNVVPFVKRKNLKNEVFLLNESSPQEFIDRI CCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHC DPNWSGSIPATLFIKNDKRKFVESEFTYEQLLTEYKKL CCCCCCCCCEEEEEECCHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA