Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146301833

Identifier: 146301833

GI number: 146301833

Start: 4912791

End: 4914809

Strand: Reverse

Name: 146301833

Synonym: Fjoh_4097

Alternate gene names: NA

Gene position: 4914809-4912791 (Counterclockwise)

Preceding gene: 146301834

Following gene: 146301832

Centisome position: 80.61

GC content: 35.56

Gene sequence:

>2019_bases
ATGAAAAAGAACATCATCATATCCTCTTTATTTCTTTCAACCGTAATCTTTGCGCAGAACAAAGGTTTGGTTGCCAATTC
AGAAAGTCCGTATTCGAAATTACAAAGTGTTGGTTTGCAAGATGTAAAATGGACAAACGGTTTTTGGAAAGAACAATTTG
ATGTAGAAACCAAAAATACTTTGCCATATATGTGGGATTTGTATCATAACGATGAGATTTCGCATGCTTACAAAAACTTC
GAAATTGCTGCAGGTTTAAGTAAAGGAACTTTTAAAGGGCCTTCGTTTCATGATGGTGATTTCTATAAGATTTTTGAAGG
AATGGCAGCAACTTATGCCGTTACAAAAGACAAAAAACTCGATGCTGAAATGGATAAAGCGATTGCGCTTTTTGCGAAAG
TACAGCGCAAAGACGGTTATATTCATACGCCGGTTTTAATTGATGAACGCTGGGGGACTTTAGGGCCAGAAGAAGTTAAA
AAACAATTGGGTTTCGAAAAATACAATATGGGACATTTGATGACTGCAGCTTGTATTCATTATCGTGCCACAGGAAAAAC
AAACTTTCTGAACATCGCAAAAGGTGTTGCCGATTTCTTGTATGATTTCTATAAAAAAGCTTCACCAGAATTGGCTCGAA
ATGCCATTTGTCCGTCTCATTATATGGGAATTGTCGAAATGTACAGAACGACCAAAAATCCGAAATACTTAGAGTTGGCT
AATAATTTAATTGATATTCGCGGAACCACAAATGACGGAACCGATGATAATCAAGATAGAGTGCCGTTTAGACAGCAAAC
AACTGCAATGGGGCACGCTGTAAGAGCAAATTACCTTTATGCCGGAGTAGCCGATTTGTATGCAGAAACAGGAGAAAAGA
AATTATTAGACAATTTAGAATCTATTTGGGATGATGTAACGTATCGTAAAATGTACATTACAGGGGGTTGTGGATCTTTA
TATGACGGCGTTTCGCCAGACGGAACTTCTTATGATCCAACTGTAGTTCAGAAAATTCATCAGGCTTACGGAAGACCTTT
TCAATTGCCAAATGCAACGGCTCATACCGAAACCTGTGCTAATATTGGAAATGTTTTATGGAATTGGAGAATGCTTCAAA
TTACCGGAGATGCCAAATATGCTGATATTATAGAATTAGCTCTTTATAACAGTGTACTTTCTGGAATGGATTTAGAAGGA
GAAAAATTCTTGTATAACAATCCGCTGAATGTTTCTAATGATTTGCCATTTCATCAACGTTGGGGGAATGAGCGTGAAGG
ATATATTGCCTTATCCAACTGTTGTGCACCAAACGTAACGAGAACAATTGCTGAAGTTGGAAATTATGCTTACAATATTT
CGAAAGAAGGTTTGTATGTGAATTTATATGGAAGTAATCAATTGAAAACAAAATCTTTAAACGGAGAAGAAATCGAAATT
GAACAGCAAACCAATTATCCGTGGGACGGAAAAATAACTTTGAAAATTGTGAAAGCTCCAAAAGATTTACAAAATTTCTT
TTTAAGAATTCCGGGTTGGAGTCAGAATGCTGAAATTTTGATAAACAATTCAAAAATTAATGATAAAATTGTTTCAGGAA
CTTATTTGAAATTAAATCAGAAATGGAAAAAAGGAGATGTAATCGAATTGAATTTTCCAATGCCGGTTGAGTTAATGGAA
GCGAATCCGTTGGTTGAAGAAGTTAAAAATCAGGTCGCTGTAAAAAGAGGACCTTTGGTATATTGCTTAGAATCTGATCA
GCTTCCTGCGAAAGTAAGTGTAAATGATGTGGCTTTAAATTTGAAATCGAATTTCGCAACAAACAATTTCATATTGAATA
ATAGAAATTTAGTAAGCATTGATGCTGAAGCCGTTATAAATTCAAATAATTCATGGAATAAAACGTTGTACAAACCGCTT
TCTTCTAAAAATGCAGATGCTGTACAAGTAAAATTGATTCCGTATTTTGCATGGGGAAATAAAGGAAAAGGGGAGATGAC
GGTTTGGATGTCGCACTAA

Upstream 100 bases:

>100_bases
ATTTTATACTAAATAATCTGTGCTAATTCTTTTAATCTGTGGCAAAAAACTAATTCGTGGAAATTAGTCTAATTCGTGGC
AAACAAAAAATAAATTCAAA

Downstream 100 bases:

>100_bases
ATTTTGGACGCGGATGAAACGGATTGCCCTTGGCAAAACGCGGATTTAAACGGATTTTTAATTTTTGTCAAAGATATTAA
TCGCTCAGTTTGTCATTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 672; Mature: 672

Protein sequence:

>672_residues
MKKNIIISSLFLSTVIFAQNKGLVANSESPYSKLQSVGLQDVKWTNGFWKEQFDVETKNTLPYMWDLYHNDEISHAYKNF
EIAAGLSKGTFKGPSFHDGDFYKIFEGMAATYAVTKDKKLDAEMDKAIALFAKVQRKDGYIHTPVLIDERWGTLGPEEVK
KQLGFEKYNMGHLMTAACIHYRATGKTNFLNIAKGVADFLYDFYKKASPELARNAICPSHYMGIVEMYRTTKNPKYLELA
NNLIDIRGTTNDGTDDNQDRVPFRQQTTAMGHAVRANYLYAGVADLYAETGEKKLLDNLESIWDDVTYRKMYITGGCGSL
YDGVSPDGTSYDPTVVQKIHQAYGRPFQLPNATAHTETCANIGNVLWNWRMLQITGDAKYADIIELALYNSVLSGMDLEG
EKFLYNNPLNVSNDLPFHQRWGNEREGYIALSNCCAPNVTRTIAEVGNYAYNISKEGLYVNLYGSNQLKTKSLNGEEIEI
EQQTNYPWDGKITLKIVKAPKDLQNFFLRIPGWSQNAEILINNSKINDKIVSGTYLKLNQKWKKGDVIELNFPMPVELME
ANPLVEEVKNQVAVKRGPLVYCLESDQLPAKVSVNDVALNLKSNFATNNFILNNRNLVSIDAEAVINSNNSWNKTLYKPL
SSKNADAVQVKLIPYFAWGNKGKGEMTVWMSH

Sequences:

>Translated_672_residues
MKKNIIISSLFLSTVIFAQNKGLVANSESPYSKLQSVGLQDVKWTNGFWKEQFDVETKNTLPYMWDLYHNDEISHAYKNF
EIAAGLSKGTFKGPSFHDGDFYKIFEGMAATYAVTKDKKLDAEMDKAIALFAKVQRKDGYIHTPVLIDERWGTLGPEEVK
KQLGFEKYNMGHLMTAACIHYRATGKTNFLNIAKGVADFLYDFYKKASPELARNAICPSHYMGIVEMYRTTKNPKYLELA
NNLIDIRGTTNDGTDDNQDRVPFRQQTTAMGHAVRANYLYAGVADLYAETGEKKLLDNLESIWDDVTYRKMYITGGCGSL
YDGVSPDGTSYDPTVVQKIHQAYGRPFQLPNATAHTETCANIGNVLWNWRMLQITGDAKYADIIELALYNSVLSGMDLEG
EKFLYNNPLNVSNDLPFHQRWGNEREGYIALSNCCAPNVTRTIAEVGNYAYNISKEGLYVNLYGSNQLKTKSLNGEEIEI
EQQTNYPWDGKITLKIVKAPKDLQNFFLRIPGWSQNAEILINNSKINDKIVSGTYLKLNQKWKKGDVIELNFPMPVELME
ANPLVEEVKNQVAVKRGPLVYCLESDQLPAKVSVNDVALNLKSNFATNNFILNNRNLVSIDAEAVINSNNSWNKTLYKPL
SSKNADAVQVKLIPYFAWGNKGKGEMTVWMSH
>Mature_672_residues
MKKNIIISSLFLSTVIFAQNKGLVANSESPYSKLQSVGLQDVKWTNGFWKEQFDVETKNTLPYMWDLYHNDEISHAYKNF
EIAAGLSKGTFKGPSFHDGDFYKIFEGMAATYAVTKDKKLDAEMDKAIALFAKVQRKDGYIHTPVLIDERWGTLGPEEVK
KQLGFEKYNMGHLMTAACIHYRATGKTNFLNIAKGVADFLYDFYKKASPELARNAICPSHYMGIVEMYRTTKNPKYLELA
NNLIDIRGTTNDGTDDNQDRVPFRQQTTAMGHAVRANYLYAGVADLYAETGEKKLLDNLESIWDDVTYRKMYITGGCGSL
YDGVSPDGTSYDPTVVQKIHQAYGRPFQLPNATAHTETCANIGNVLWNWRMLQITGDAKYADIIELALYNSVLSGMDLEG
EKFLYNNPLNVSNDLPFHQRWGNEREGYIALSNCCAPNVTRTIAEVGNYAYNISKEGLYVNLYGSNQLKTKSLNGEEIEI
EQQTNYPWDGKITLKIVKAPKDLQNFFLRIPGWSQNAEILINNSKINDKIVSGTYLKLNQKWKKGDVIELNFPMPVELME
ANPLVEEVKNQVAVKRGPLVYCLESDQLPAKVSVNDVALNLKSNFATNNFILNNRNLVSIDAEAVINSNNSWNKTLYKPL
SSKNADAVQVKLIPYFAWGNKGKGEMTVWMSH

Specific function: Unknown

COG id: COG3533

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75856; Mature: 75856

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNIIISSLFLSTVIFAQNKGLVANSESPYSKLQSVGLQDVKWTNGFWKEQFDVETKNT
CCCCEEHHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCCCEECCCCCCCCCCCCCCCCC
LPYMWDLYHNDEISHAYKNFEIAAGLSKGTFKGPSFHDGDFYKIFEGMAATYAVTKDKKL
CCEEEEEECCCCHHHHHHCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHEEEEECCCCC
DAEMDKAIALFAKVQRKDGYIHTPVLIDERWGTLGPEEVKKQLGFEKYNMGHLMTAACIH
CHHHHHHHHHHHHHHHCCCEEECCEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHE
YRATGKTNFLNIAKGVADFLYDFYKKASPELARNAICPSHYMGIVEMYRTTKNPKYLELA
EECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEC
NNLIDIRGTTNDGTDDNQDRVPFRQQTTAMGHAVRANYLYAGVADLYAETGEKKLLDNLE
CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEHHHHHHHHHCCHHHHHHHHH
SIWDDVTYRKMYITGGCGSLYDGVSPDGTSYDPTVVQKIHQAYGRPFQLPNATAHTETCA
HHHCCCCEEEEEEECCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH
NIGNVLWNWRMLQITGDAKYADIIELALYNSVLSGMDLEGEKFLYNNPLNVSNDLPFHQR
HHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHH
WGNEREGYIALSNCCAPNVTRTIAEVGNYAYNISKEGLYVNLYGSNQLKTKSLNGEEIEI
CCCCCCCEEEEECCCCCCHHHHHHHHCCEEEEECCCCEEEEEECCCCEEEECCCCCEEEE
EQQTNYPWDGKITLKIVKAPKDLQNFFLRIPGWSQNAEILINNSKINDKIVSGTYLKLNQ
EECCCCCCCCEEEEEEECCCHHHHHHEEECCCCCCCCEEEEECCCCCCEEECCEEEEEEC
KWKKGDVIELNFPMPVELMEANPLVEEVKNQVAVKRGPLVYCLESDQLPAKVSVNDVALN
CCCCCCEEEECCCCCEEEECCCHHHHHHHHHHEEECCCEEEEECCCCCCCEEEEEEEEEE
LKSNFATNNFILNNRNLVSIDAEAVINSNNSWNKTLYKPLSSKNADAVQVKLIPYFAWGN
EECCCCCCCEEECCCCEEEEEHHEEECCCCCCCHHHHCCCCCCCCCEEEEEEEEEEEECC
KGKGEMTVWMSH
CCCCCEEEEEEC
>Mature Secondary Structure
MKKNIIISSLFLSTVIFAQNKGLVANSESPYSKLQSVGLQDVKWTNGFWKEQFDVETKNT
CCCCEEHHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCCCEECCCCCCCCCCCCCCCCC
LPYMWDLYHNDEISHAYKNFEIAAGLSKGTFKGPSFHDGDFYKIFEGMAATYAVTKDKKL
CCEEEEEECCCCHHHHHHCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHEEEEECCCCC
DAEMDKAIALFAKVQRKDGYIHTPVLIDERWGTLGPEEVKKQLGFEKYNMGHLMTAACIH
CHHHHHHHHHHHHHHHCCCEEECCEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHE
YRATGKTNFLNIAKGVADFLYDFYKKASPELARNAICPSHYMGIVEMYRTTKNPKYLELA
EECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEC
NNLIDIRGTTNDGTDDNQDRVPFRQQTTAMGHAVRANYLYAGVADLYAETGEKKLLDNLE
CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEHHHHHHHHHCCHHHHHHHHH
SIWDDVTYRKMYITGGCGSLYDGVSPDGTSYDPTVVQKIHQAYGRPFQLPNATAHTETCA
HHHCCCCEEEEEEECCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH
NIGNVLWNWRMLQITGDAKYADIIELALYNSVLSGMDLEGEKFLYNNPLNVSNDLPFHQR
HHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHH
WGNEREGYIALSNCCAPNVTRTIAEVGNYAYNISKEGLYVNLYGSNQLKTKSLNGEEIEI
CCCCCCCEEEEECCCCCCHHHHHHHHCCEEEEECCCCEEEEEECCCCEEEECCCCCEEEE
EQQTNYPWDGKITLKIVKAPKDLQNFFLRIPGWSQNAEILINNSKINDKIVSGTYLKLNQ
EECCCCCCCCEEEEEEECCCHHHHHHEEECCCCCCCCEEEEECCCCCCEEECCEEEEEEC
KWKKGDVIELNFPMPVELMEANPLVEEVKNQVAVKRGPLVYCLESDQLPAKVSVNDVALN
CCCCCCEEEECCCCCEEEECCCHHHHHHHHHHEEECCCEEEEECCCCCCCEEEEEEEEEE
LKSNFATNNFILNNRNLVSIDAEAVINSNNSWNKTLYKPLSSKNADAVQVKLIPYFAWGN
EECCCCCCCEEECCCCEEEEEHHEEECCCCCCCHHHHCCCCCCCCCEEEEEEEEEEEECC
KGKGEMTVWMSH
CCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA