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The map label for this gene is ribB [H]

Identifier: 146301799

GI number: 146301799

Start: 4849326

End: 4849988

Strand: Direct

Name: ribB [H]

Synonym: Fjoh_4063

Alternate gene names: 146301799

Gene position: 4849326-4849988 (Clockwise)

Preceding gene: 146301797

Following gene: 146301800

Centisome position: 79.54

GC content: 41.33

Gene sequence:

>663_bases
ATGATAAGTACAGAAATAAGTCCGTTAGTACAATTTGGAATAACCAGTAAAGAACGGGTTGAAAACGCCCTAGAACAGCT
AAAAAACGGAAAAGGTATTATCGTAACCGATGATGAAGACCGCGAAAATGAGGGCGATCTGATTTTTTCTGCCCACCACA
TGAATACTGCAGATATGGCTTTAATGATTCGTGAATGCAGCGGTATTGTCTGTCTCTGCCTTCCAAATGAAAAAGCAGAC
CAGCTTGATCTTCCTTATATGGTAAAAGAAAATACAAGCAGTTTCCAGACTCCTTTTACCGTTACGATCGAAGCCAAAAA
AGGCGTTACAACCGGAGTTTCTGCAGCTGACAGAATTACAACCATTAAAGCTGCTATTGCACAAAATGCAAAACCGGAAG
ATCTGGCAAGGCCCGGACATATTTTTCCGCTTCGCGCGAGAGATAATGGCGTTTTAGAACGAAACGGCCATACAGAAGGA
AGTGTCGATTTAATGAAACTGGCGGGTTTACAGCCCGAAGCCGTTCTTTGCGAATTAATGAATGAAGACGGCAGCATGGC
TAAACTGGACAAAATCATTAGCTTTGCACAACAGCACGACTTAGTAGTTTTATCTATCGAAGATATTCTACACTACCGTA
AATTTGTGCGTGATTATAACTAA

Upstream 100 bases:

>100_bases
AAAAGTATATCCAATTTATTGACTTATATCAAACTTTTAGATTCCAGACAACTGTACATTTGAAATTCAATTATTTTAAA
AAGTTTCAAAACACAATACC

Downstream 100 bases:

>100_bases
AAATGATATACGAACAGCTTGGTAATTATATTAAAAAAAGCATTGAAGTTTCGGATGAAGATTTAAATACCATTCTCTCC
TATTTCAAACCTTTAAAAAA

Product: 3,4-dihydroxy-2-butanone 4-phosphate synthase

Products: NA

Alternate protein names: DHBP synthase [H]

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MISTEISPLVQFGITSKERVENALEQLKNGKGIIVTDDEDRENEGDLIFSAHHMNTADMALMIRECSGIVCLCLPNEKAD
QLDLPYMVKENTSSFQTPFTVTIEAKKGVTTGVSAADRITTIKAAIAQNAKPEDLARPGHIFPLRARDNGVLERNGHTEG
SVDLMKLAGLQPEAVLCELMNEDGSMAKLDKIISFAQQHDLVVLSIEDILHYRKFVRDYN

Sequences:

>Translated_220_residues
MISTEISPLVQFGITSKERVENALEQLKNGKGIIVTDDEDRENEGDLIFSAHHMNTADMALMIRECSGIVCLCLPNEKAD
QLDLPYMVKENTSSFQTPFTVTIEAKKGVTTGVSAADRITTIKAAIAQNAKPEDLARPGHIFPLRARDNGVLERNGHTEG
SVDLMKLAGLQPEAVLCELMNEDGSMAKLDKIISFAQQHDLVVLSIEDILHYRKFVRDYN
>Mature_220_residues
MISTEISPLVQFGITSKERVENALEQLKNGKGIIVTDDEDRENEGDLIFSAHHMNTADMALMIRECSGIVCLCLPNEKAD
QLDLPYMVKENTSSFQTPFTVTIEAKKGVTTGVSAADRITTIKAAIAQNAKPEDLARPGHIFPLRARDNGVLERNGHTEG
SVDLMKLAGLQPEAVLCELMNEDGSMAKLDKIISFAQQHDLVVLSIEDILHYRKFVRDYN

Specific function: Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate [H]

COG id: COG0108

COG function: function code H; 3,4-dihydroxy-2-butanone 4-phosphate synthase

Gene ontology:

Cell location: Membrane-Associated [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHBP synthase family [H]

Homologues:

Organism=Escherichia coli, GI1789420, Length=206, Percent_Identity=60.6796116504854, Blast_Score=265, Evalue=3e-72,
Organism=Saccharomyces cerevisiae, GI6320695, Length=203, Percent_Identity=42.8571428571429, Blast_Score=172, Evalue=6e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017945
- InterPro:   IPR000422 [H]

Pfam domain/function: PF00926 DHBP_synthase [H]

EC number: =4.1.99.12 [H]

Molecular weight: Translated: 24342; Mature: 24342

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISTEISPLVQFGITSKERVENALEQLKNGKGIIVTDDEDRENEGDLIFSAHHMNTADMA
CCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCHHHHH
LMIRECSGIVCLCLPNEKADQLDLPYMVKENTSSFQTPFTVTIEAKKGVTTGVSAADRIT
HHHHHCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHH
TIKAAIAQNAKPEDLARPGHIFPLRARDNGVLERNGHTEGSVDLMKLAGLQPEAVLCELM
HHHHHHHCCCCHHHHCCCCCEEEEEECCCCEEECCCCCCCCCHHHHHCCCCHHHHHHHHH
NEDGSMAKLDKIISFAQQHDLVVLSIEDILHYRKFVRDYN
CCCCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHCCC
>Mature Secondary Structure
MISTEISPLVQFGITSKERVENALEQLKNGKGIIVTDDEDRENEGDLIFSAHHMNTADMA
CCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCHHHHH
LMIRECSGIVCLCLPNEKADQLDLPYMVKENTSSFQTPFTVTIEAKKGVTTGVSAADRIT
HHHHHCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHH
TIKAAIAQNAKPEDLARPGHIFPLRARDNGVLERNGHTEGSVDLMKLAGLQPEAVLCELM
HHHHHHHCCCCHHHHCCCCCEEEEEECCCCEEECCCCCCCCCHHHHHCCCCHHHHHHHHH
NEDGSMAKLDKIISFAQQHDLVVLSIEDILHYRKFVRDYN
CCCCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA