| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146301755
Identifier: 146301755
GI number: 146301755
Start: 4798000
End: 4799385
Strand: Direct
Name: 146301755
Synonym: Fjoh_4017
Alternate gene names: NA
Gene position: 4798000-4799385 (Clockwise)
Preceding gene: 146301754
Following gene: 146301756
Centisome position: 78.7
GC content: 31.67
Gene sequence:
>1386_bases ATGTCATTTAATTTAAGAGTAAAAGGAAATATTACAACCAAAGTAGGCGGTACGACAAGAATGTATGCCAAAGAAGGAGT TGAAATAAATTCAAAAGGAAGCATTAATTATTATGCTCCAGAATACAGTTATGGCGAACCAGAAGATCCGCCAATAAAAA TAATAGAAGGAGCTGTTAAAGAAATTGAGCTTTTAACAGCTTTAGATCAGGGATCTGATAATGCTAAATCAGATAAATCT CAGCCCGGAATGATTTTTGGCAATACCTATCATTTCAAAGTGAAAAGTTATATAAAAAATCCTCCCGTAAATCTGTCAGA GATTAAATGGATGCTAAAATATCACAGCCTTTCTCAAAACAAGTGGCTCGAAATACCTCTTTCTGCAAAAGGAGATTCTG TAAAAATCACACTGAATGACGAAGATATGTGTGGACGCTATATTTATGTTCGTGCCTATGTAAGTAATCCAGAAACTGAA GCTGAATATAAAGAATGGATGCATAATCGCTTTAGATGGTTTAATAGATTAAAAATACATCAGCAAATAAAAGATCGCGT TAAAGATCCTTGGAAAATAAGCCAAGAATATAGTTCACTTTGTGGAATGGCAGCTTTGTTCTATATCATGATAAAACGTG ATCCAAAAGCTTATGAAAAGTTGGCAAAGCAATTGTTTAGAACAGGACAATACAAAATAGATACTTATATTATAAAGCCT CATGAAAAAGCTTTAAGCATGTATGAAACCAAAACTACAGATGCTAATTACAAATCTATGGGAATGCAGGAAATTGACTG GATAGTATTGGCAACCACCCGAAGCGGAGAAAGCTTAAATGATCAGTTTGTTTATAACGGTTTTGAAAATAGTGATATGG ATATGATAAAAGCTGTTAACTGGCCTGATATGCTTACTAGAATGTGCAAAGAAGTAGCAGGCTATGCAAATGCAGAATCA TTTGGGTTAAATTTATTATCTATTAAGGATAAAAAAGGAATTGGAGCAAAAGCTCATGATTATGTTTCTAATTCTGATTT ATTAGAACTTCAAACAATTAATAAAAAATACAATGCAGGACATACTATTTTAATGATGATAGATTCTGATATGATTGAAG ATGTTTCAAGTTACAATCCTAAAAATCTAACTACAAATTCGCATTGGGTTGTTTATGAAGGAGGATTAAACTTTCTAGAA GTAGGCGACAATAAATTTGTACATTTTAATATTTATACTTGGGGATTGGATTTTAAAAATGATTATCTCCCACAGTCAAG GGACAAAAAAGAAGTTCCTTCAAAATATAATTTTCTATACTCTCCTTACAGTATTGATGTCGAATCATTTAAATCTAATT ATTATGGATACATTGAAGTTTATTAG
Upstream 100 bases:
>100_bases AAGATATTCAGGAAATCGCCAATAAAACTTTTTATGCAGATGATCAGTTTCATGTTATCGACTTTTTAACTTTTATCATA ACCGAAGAAAAATAAATACT
Downstream 100 bases:
>100_bases TATTCTATTTATAAGTTTTTTATTTATTAGATGTAATAATAATGAATATTACGATGATAATAATGCTTTTCATTCTATTT ATCTTCTGGAATGGAACTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MSFNLRVKGNITTKVGGTTRMYAKEGVEINSKGSINYYAPEYSYGEPEDPPIKIIEGAVKEIELLTALDQGSDNAKSDKS QPGMIFGNTYHFKVKSYIKNPPVNLSEIKWMLKYHSLSQNKWLEIPLSAKGDSVKITLNDEDMCGRYIYVRAYVSNPETE AEYKEWMHNRFRWFNRLKIHQQIKDRVKDPWKISQEYSSLCGMAALFYIMIKRDPKAYEKLAKQLFRTGQYKIDTYIIKP HEKALSMYETKTTDANYKSMGMQEIDWIVLATTRSGESLNDQFVYNGFENSDMDMIKAVNWPDMLTRMCKEVAGYANAES FGLNLLSIKDKKGIGAKAHDYVSNSDLLELQTINKKYNAGHTILMMIDSDMIEDVSSYNPKNLTTNSHWVVYEGGLNFLE VGDNKFVHFNIYTWGLDFKNDYLPQSRDKKEVPSKYNFLYSPYSIDVESFKSNYYGYIEVY
Sequences:
>Translated_461_residues MSFNLRVKGNITTKVGGTTRMYAKEGVEINSKGSINYYAPEYSYGEPEDPPIKIIEGAVKEIELLTALDQGSDNAKSDKS QPGMIFGNTYHFKVKSYIKNPPVNLSEIKWMLKYHSLSQNKWLEIPLSAKGDSVKITLNDEDMCGRYIYVRAYVSNPETE AEYKEWMHNRFRWFNRLKIHQQIKDRVKDPWKISQEYSSLCGMAALFYIMIKRDPKAYEKLAKQLFRTGQYKIDTYIIKP HEKALSMYETKTTDANYKSMGMQEIDWIVLATTRSGESLNDQFVYNGFENSDMDMIKAVNWPDMLTRMCKEVAGYANAES FGLNLLSIKDKKGIGAKAHDYVSNSDLLELQTINKKYNAGHTILMMIDSDMIEDVSSYNPKNLTTNSHWVVYEGGLNFLE VGDNKFVHFNIYTWGLDFKNDYLPQSRDKKEVPSKYNFLYSPYSIDVESFKSNYYGYIEVY >Mature_460_residues SFNLRVKGNITTKVGGTTRMYAKEGVEINSKGSINYYAPEYSYGEPEDPPIKIIEGAVKEIELLTALDQGSDNAKSDKSQ PGMIFGNTYHFKVKSYIKNPPVNLSEIKWMLKYHSLSQNKWLEIPLSAKGDSVKITLNDEDMCGRYIYVRAYVSNPETEA EYKEWMHNRFRWFNRLKIHQQIKDRVKDPWKISQEYSSLCGMAALFYIMIKRDPKAYEKLAKQLFRTGQYKIDTYIIKPH EKALSMYETKTTDANYKSMGMQEIDWIVLATTRSGESLNDQFVYNGFENSDMDMIKAVNWPDMLTRMCKEVAGYANAESF GLNLLSIKDKKGIGAKAHDYVSNSDLLELQTINKKYNAGHTILMMIDSDMIEDVSSYNPKNLTTNSHWVVYEGGLNFLEV GDNKFVHFNIYTWGLDFKNDYLPQSRDKKEVPSKYNFLYSPYSIDVESFKSNYYGYIEVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53363; Mature: 53232
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFNLRVKGNITTKVGGTTRMYAKEGVEINSKGSINYYAPEYSYGEPEDPPIKIIEGAVK CCEEEEEECCEEEECCCCEEEEHHCCEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHH EIELLTALDQGSDNAKSDKSQPGMIFGNTYHFKVKSYIKNPPVNLSEIKWMLKYHSLSQN HHHHHHHHCCCCCCCCCCCCCCCEEECCEEEEEEHHHHCCCCCCHHHHHHHHHHHCCCCC KWLEIPLSAKGDSVKITLNDEDMCGRYIYVRAYVSNPETEAEYKEWMHNRFRWFNRLKIH CEEEEEECCCCCEEEEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH QQIKDRVKDPWKISQEYSSLCGMAALFYIMIKRDPKAYEKLAKQLFRTGQYKIDTYIIKP HHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCEEEEEEEECC HEKALSMYETKTTDANYKSMGMQEIDWIVLATTRSGESLNDQFVYNGFENSDMDMIKAVN HHHHHHHHHCCCCCCCHHHCCCCCEEEEEEEEECCCCCCCCCEEECCCCCCCCHHHEECC WPDMLTRMCKEVAGYANAESFGLNLLSIKDKKGIGAKAHDYVSNSDLLELQTINKKYNAG CHHHHHHHHHHHHCCCCCHHHCEEEEEEECCCCCCCCHHHCCCCCCEEEEEECCCCCCCC HTILMMIDSDMIEDVSSYNPKNLTTNSHWVVYEGGLNFLEVGDNKFVHFNIYTWGLDFKN CEEEEEECCHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEECCCEEEEEEEEEEEECCCC DYLPQSRDKKEVPSKYNFLYSPYSIDVESFKSNYYGYIEVY CCCCCCCCHHHCCCHHCEEECCEEEEHHHHCCCCCEEEEEC >Mature Secondary Structure SFNLRVKGNITTKVGGTTRMYAKEGVEINSKGSINYYAPEYSYGEPEDPPIKIIEGAVK CEEEEEECCEEEECCCCEEEEHHCCEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHH EIELLTALDQGSDNAKSDKSQPGMIFGNTYHFKVKSYIKNPPVNLSEIKWMLKYHSLSQN HHHHHHHHCCCCCCCCCCCCCCCEEECCEEEEEEHHHHCCCCCCHHHHHHHHHHHCCCCC KWLEIPLSAKGDSVKITLNDEDMCGRYIYVRAYVSNPETEAEYKEWMHNRFRWFNRLKIH CEEEEEECCCCCEEEEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH QQIKDRVKDPWKISQEYSSLCGMAALFYIMIKRDPKAYEKLAKQLFRTGQYKIDTYIIKP HHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCEEEEEEEECC HEKALSMYETKTTDANYKSMGMQEIDWIVLATTRSGESLNDQFVYNGFENSDMDMIKAVN HHHHHHHHHCCCCCCCHHHCCCCCEEEEEEEEECCCCCCCCCEEECCCCCCCCHHHEECC WPDMLTRMCKEVAGYANAESFGLNLLSIKDKKGIGAKAHDYVSNSDLLELQTINKKYNAG CHHHHHHHHHHHHCCCCCHHHCEEEEEEECCCCCCCCHHHCCCCCCEEEEEECCCCCCCC HTILMMIDSDMIEDVSSYNPKNLTTNSHWVVYEGGLNFLEVGDNKFVHFNIYTWGLDFKN CEEEEEECCHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEECCCEEEEEEEEEEEECCCC DYLPQSRDKKEVPSKYNFLYSPYSIDVESFKSNYYGYIEVY CCCCCCCCHHHCCCHHCEEECCEEEEHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA