| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301730
Identifier: 146301730
GI number: 146301730
Start: 4776554
End: 4777639
Strand: Reverse
Name: 146301730
Synonym: Fjoh_3992
Alternate gene names: NA
Gene position: 4777639-4776554 (Counterclockwise)
Preceding gene: 146301731
Following gene: 146301729
Centisome position: 78.36
GC content: 38.21
Gene sequence:
>1086_bases ATGTGGTACAATACAAAAGCTAAAGAACTCTTAGGAATTGATTATCCAATTTTACAAGGACCTTTTGGAGGCAATTTATC AAGTGTAGAATTAACCGCTGCAGTTTCTAATGCAGGCGGATTAGGCGGTTATGGAGTTTATACAATGAGTCCGCAGGAAA TTTTCGACATTGATAAACAGTTAAAAGCAGCCACAAATAAACCCTATAATATCAATCTTTGGGTTTCAGACCATGATATT CCCGAAGGCGGTTTAACCGATGAACAGTTTGAGAAAACAAAAGCCGTTTTTAAACCGTATTATGATGAAGCTGGAATCGC ACTTCCGGAAAAACCAGCTCCATTTCAATCTAGATTTGAAAATCAGCTGCAGGTAATTTTAGACGTTAAGCCAAAAGTTT TCAGTTTTATGTTTGGCGTTCCCTCAGATGATGTTTTAGAACAATGCCGAAAATCAGGAATTGTAACAGTTGGAGCTGCA ACAACTCTCGATGAAGCTGTTTTTTTGGACAGCAAAGGCGTTGATATGATTATTGCTTCTGGTTTTGAAGCAGGCGGACA TCGTCCTTCTTTTTTAGATAAATCTGAAGTTTCTTTAACCGGAACTTTTGTTCTATTGCAGTTAATGCGCGAAAAAATAA AAACACCCATAATTGTAGCCGGCGGCATTGCTGATGGAAAAGGAATTGCAGCAGCTTTAACATTAGGAGCAAGTGCTGCG CAAATAGGAACCGCTTTTTTAGCTACAGACGAATCTAATGCACTGCCAATTCATAGAGAAATGCTGTTTTCTGATGCTGC AAAATACACCACACTTTCACGCGCTTACACAGGAAGACTCGGACGCGGGATTACAAGCCGGCTTGCTAAAGATATAATGG GAAAAGAATCAGATATTCTGCCTTTTCCATTACAGACTACTTTTATTGCTCCACTGCGAAAAGCAGCGCTTGATAAACAA AAATGGGATATGATATTATTTTGGGGCGGTCAGATTTCTCCAATTTTAAAACATACTAAAGCTTCTGTTTTGATGAATGC TTTGATTGAAGAAACTACAGCTTATTTTGATGGATTAAAATCATAA
Upstream 100 bases:
>100_bases AATTATCGGGATTTTTTATCTTTCCATAAGATTAACGGCCGATGGCTGATTGTTAACAAAATGCTGACTGATACCAGCAG ATAATTTAAATCTTGAAGCA
Downstream 100 bases:
>100_bases TACTAAATAGAAACTCATTTCATAACCGAAATGAGTTTTTTTTATGTCATATAAAAACAAACTAATCAATTATATTGCAA TTGATGTATGAATTTCCATT
Product: 2-nitropropane dioxygenase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MWYNTKAKELLGIDYPILQGPFGGNLSSVELTAAVSNAGGLGGYGVYTMSPQEIFDIDKQLKAATNKPYNINLWVSDHDI PEGGLTDEQFEKTKAVFKPYYDEAGIALPEKPAPFQSRFENQLQVILDVKPKVFSFMFGVPSDDVLEQCRKSGIVTVGAA TTLDEAVFLDSKGVDMIIASGFEAGGHRPSFLDKSEVSLTGTFVLLQLMREKIKTPIIVAGGIADGKGIAAALTLGASAA QIGTAFLATDESNALPIHREMLFSDAAKYTTLSRAYTGRLGRGITSRLAKDIMGKESDILPFPLQTTFIAPLRKAALDKQ KWDMILFWGGQISPILKHTKASVLMNALIEETTAYFDGLKS
Sequences:
>Translated_361_residues MWYNTKAKELLGIDYPILQGPFGGNLSSVELTAAVSNAGGLGGYGVYTMSPQEIFDIDKQLKAATNKPYNINLWVSDHDI PEGGLTDEQFEKTKAVFKPYYDEAGIALPEKPAPFQSRFENQLQVILDVKPKVFSFMFGVPSDDVLEQCRKSGIVTVGAA TTLDEAVFLDSKGVDMIIASGFEAGGHRPSFLDKSEVSLTGTFVLLQLMREKIKTPIIVAGGIADGKGIAAALTLGASAA QIGTAFLATDESNALPIHREMLFSDAAKYTTLSRAYTGRLGRGITSRLAKDIMGKESDILPFPLQTTFIAPLRKAALDKQ KWDMILFWGGQISPILKHTKASVLMNALIEETTAYFDGLKS >Mature_361_residues MWYNTKAKELLGIDYPILQGPFGGNLSSVELTAAVSNAGGLGGYGVYTMSPQEIFDIDKQLKAATNKPYNINLWVSDHDI PEGGLTDEQFEKTKAVFKPYYDEAGIALPEKPAPFQSRFENQLQVILDVKPKVFSFMFGVPSDDVLEQCRKSGIVTVGAA TTLDEAVFLDSKGVDMIIASGFEAGGHRPSFLDKSEVSLTGTFVLLQLMREKIKTPIIVAGGIADGKGIAAALTLGASAA QIGTAFLATDESNALPIHREMLFSDAAKYTTLSRAYTGRLGRGITSRLAKDIMGKESDILPFPLQTTFIAPLRKAALDKQ KWDMILFWGGQISPILKHTKASVLMNALIEETTAYFDGLKS
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=346, Percent_Identity=28.6127167630058, Blast_Score=103, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 39128; Mature: 39128
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWYNTKAKELLGIDYPILQGPFGGNLSSVELTAAVSNAGGLGGYGVYTMSPQEIFDIDKQ CCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEECCHHHHHHHHHH LKAATNKPYNINLWVSDHDIPEGGLTDEQFEKTKAVFKPYYDEAGIALPEKPAPFQSRFE HHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH NQLQVILDVKPKVFSFMFGVPSDDVLEQCRKSGIVTVGAATTLDEAVFLDSKGVDMIIAS HCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCCEEEECHHHHHHHEEECCCCCCEEEEC GFEAGGHRPSFLDKSEVSLTGTFVLLQLMREKIKTPIIVAGGIADGKGIAAALTLGASAA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEHHHHCCCHH QIGTAFLATDESNALPIHREMLFSDAAKYTTLSRAYTGRLGRGITSRLAKDIMGKESDIL HHCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC PFPLQTTFIAPLRKAALDKQKWDMILFWGGQISPILKHTKASVLMNALIEETTAYFDGLK CCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC S C >Mature Secondary Structure MWYNTKAKELLGIDYPILQGPFGGNLSSVELTAAVSNAGGLGGYGVYTMSPQEIFDIDKQ CCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEECCHHHHHHHHHH LKAATNKPYNINLWVSDHDIPEGGLTDEQFEKTKAVFKPYYDEAGIALPEKPAPFQSRFE HHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH NQLQVILDVKPKVFSFMFGVPSDDVLEQCRKSGIVTVGAATTLDEAVFLDSKGVDMIIAS HCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCCEEEECHHHHHHHEEECCCCCCEEEEC GFEAGGHRPSFLDKSEVSLTGTFVLLQLMREKIKTPIIVAGGIADGKGIAAALTLGASAA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEHHHHCCCHH QIGTAFLATDESNALPIHREMLFSDAAKYTTLSRAYTGRLGRGITSRLAKDIMGKESDIL HHCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC PFPLQTTFIAPLRKAALDKQKWDMILFWGGQISPILKHTKASVLMNALIEETTAYFDGLK CCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA