| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is resA [H]
Identifier: 146301729
GI number: 146301729
Start: 4774956
End: 4775945
Strand: Reverse
Name: resA [H]
Synonym: Fjoh_3991
Alternate gene names: 146301729
Gene position: 4775945-4774956 (Counterclockwise)
Preceding gene: 146301730
Following gene: 146301728
Centisome position: 78.33
GC content: 34.04
Gene sequence:
>990_bases ATGAAAAAAATACTATTAGGTTTTGCTTTGTTTCTTGGAGCTGTTCAAACTCAGGCACAGGAAAGTAATTTACAATTAAA AGGAACTGTTGTCGATACCGTTGCACAATATGTTTACTTACAGAAGTTTCACAATAAAATGTTTACCACAATAGATTCAG TAAAAGTAAAAGACGGAAATTTTAGTTTTAAAACAAAAGTAAAAACGCCTGAATTATACGGATTAAGTGTAAACACAGAA AGTTCGCCTTTGTATATTTTCCTTGAAAAAGAACCAATTACAGTAAAGCTGAGTCCGAAGAAATATTATACAGCTTCTGT CGTTGAGGGTTCAGCTTCTCAGGATTTGTTCGAAACCTATAAAAAGAGCAAAGATGCAGAAATCAGCAAATTTATAACTG AACATCCAAAATCTATTGTTTCTGCTTATGTCTTGTATAGAAATTGGTCATACAGATTAACACCTGAGCAGATTACACAA AATATTGCCCTGCTGGATAAAAGTCTTCAAAATACCACTTACGTGAAAGAATTAAAAGAACTGGCTGTTGTTTTAGACGG ATTAGCAGTAGGTAAAAAAGCCCCGGATTTTACAGCCAATGATCCTAACGGAAAGCCAGTTCGTCTTTATGATAATCTAA AAGGTTACACTTTAGTCGATTTTTGGGCTTCATGGTGCGGTCCATGCCGAAGAGAAAATCCGAATATCGTAGCCGCTTAC AAAGAATTTCATGACAAAGGATTCAATATTGTGGGAATTTCATTGGATAAAAAGAAAGAAAACTGGATTAAAGGAATTCA GGACGATAATTTAACCTGGACACATGTTTCTGATTTACTTTTCTGGAACAGTGCCGTTGCAAAATTATACGGTGTAGGAG CTATTCCGGGAAACTATTTAGTAGATTCAAAAGGAATAATCGTTGCAAAAAATCTTCATGGAGAAGAATTACAATCTACA CTAAAATCACTTTTAGAAAGTAAAATTTGA
Upstream 100 bases:
>100_bases ACACGAATTCTCTCTTAAACCTTCTTTTTAAAATACAATCTGCTGATGGTTTTTTCATCGGCCTGAACCCCCTTTGTCTA ATCTAAAAACTAAAAATAAA
Downstream 100 bases:
>100_bases TAAAGAAATACGCAATCTTGTCATTCCGAGGAACGAGGAATCACACTAGAGAATCCATATAGAAAGTCGTCAATCTTTGT CGAGTTACATGTGTGATTTC
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MKKILLGFALFLGAVQTQAQESNLQLKGTVVDTVAQYVYLQKFHNKMFTTIDSVKVKDGNFSFKTKVKTPELYGLSVNTE SSPLYIFLEKEPITVKLSPKKYYTASVVEGSASQDLFETYKKSKDAEISKFITEHPKSIVSAYVLYRNWSYRLTPEQITQ NIALLDKSLQNTTYVKELKELAVVLDGLAVGKKAPDFTANDPNGKPVRLYDNLKGYTLVDFWASWCGPCRRENPNIVAAY KEFHDKGFNIVGISLDKKKENWIKGIQDDNLTWTHVSDLLFWNSAVAKLYGVGAIPGNYLVDSKGIIVAKNLHGEELQST LKSLLESKI
Sequences:
>Translated_329_residues MKKILLGFALFLGAVQTQAQESNLQLKGTVVDTVAQYVYLQKFHNKMFTTIDSVKVKDGNFSFKTKVKTPELYGLSVNTE SSPLYIFLEKEPITVKLSPKKYYTASVVEGSASQDLFETYKKSKDAEISKFITEHPKSIVSAYVLYRNWSYRLTPEQITQ NIALLDKSLQNTTYVKELKELAVVLDGLAVGKKAPDFTANDPNGKPVRLYDNLKGYTLVDFWASWCGPCRRENPNIVAAY KEFHDKGFNIVGISLDKKKENWIKGIQDDNLTWTHVSDLLFWNSAVAKLYGVGAIPGNYLVDSKGIIVAKNLHGEELQST LKSLLESKI >Mature_329_residues MKKILLGFALFLGAVQTQAQESNLQLKGTVVDTVAQYVYLQKFHNKMFTTIDSVKVKDGNFSFKTKVKTPELYGLSVNTE SSPLYIFLEKEPITVKLSPKKYYTASVVEGSASQDLFETYKKSKDAEISKFITEHPKSIVSAYVLYRNWSYRLTPEQITQ NIALLDKSLQNTTYVKELKELAVVLDGLAVGKKAPDFTANDPNGKPVRLYDNLKGYTLVDFWASWCGPCRRENPNIVAAY KEFHDKGFNIVGISLDKKKENWIKGIQDDNLTWTHVSDLLFWNSAVAKLYGVGAIPGNYLVDSKGIIVAKNLHGEELQST LKSLLESKI
Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane (By similarity) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 37028; Mature: 37028
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILLGFALFLGAVQTQAQESNLQLKGTVVDTVAQYVYLQKFHNKMFTTIDSVKVKDGN CCHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCC FSFKTKVKTPELYGLSVNTESSPLYIFLEKEPITVKLSPKKYYTASVVEGSASQDLFETY EEEEEEECCCEEEEEEECCCCCCEEEEEECCCEEEEECCCCEEEEEEECCCCHHHHHHHH KKSKDAEISKFITEHPKSIVSAYVLYRNWSYRLTPEQITQNIALLDKSLQNTTYVKELKE HCCCCHHHHHHHHHCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCCHHHHHHHHH LAVVLDGLAVGKKAPDFTANDPNGKPVRLYDNLKGYTLVDFWASWCGPCRRENPNIVAAY HHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCEEEEE KEFHDKGFNIVGISLDKKKENWIKGIQDDNLTWTHVSDLLFWNSAVAKLYGVGAIPGNYL HHHHHCCCEEEEEEECCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCEE VDSKGIIVAKNLHGEELQSTLKSLLESKI ECCCCEEEEECCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKILLGFALFLGAVQTQAQESNLQLKGTVVDTVAQYVYLQKFHNKMFTTIDSVKVKDGN CCHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCC FSFKTKVKTPELYGLSVNTESSPLYIFLEKEPITVKLSPKKYYTASVVEGSASQDLFETY EEEEEEECCCEEEEEEECCCCCCEEEEEECCCEEEEECCCCEEEEEEECCCCHHHHHHHH KKSKDAEISKFITEHPKSIVSAYVLYRNWSYRLTPEQITQNIALLDKSLQNTTYVKELKE HCCCCHHHHHHHHHCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCCHHHHHHHHH LAVVLDGLAVGKKAPDFTANDPNGKPVRLYDNLKGYTLVDFWASWCGPCRRENPNIVAAY HHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCEEEEE KEFHDKGFNIVGISLDKKKENWIKGIQDDNLTWTHVSDLLFWNSAVAKLYGVGAIPGNYL HHHHHCCCEEEEEEECCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCEE VDSKGIIVAKNLHGEELQSTLKSLLESKI ECCCCEEEEECCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA