| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146301691
Identifier: 146301691
GI number: 146301691
Start: 4723780
End: 4724589
Strand: Reverse
Name: 146301691
Synonym: Fjoh_3953
Alternate gene names: NA
Gene position: 4724589-4723780 (Counterclockwise)
Preceding gene: 146301692
Following gene: 146301690
Centisome position: 77.49
GC content: 29.38
Gene sequence:
>810_bases ATGGTGAACTTTACTTATTTTAAAAACTTAACGTGTAATAAAAATCGGGCTTTGAAGGAATTCTTGGTTAGGTTTTTATT ATTTTCTTCTGCTGAGAATGATTTTATGCAGATAGGAAAAAATGCTTCAACAACAAGTTTAAACTTTAAAAAACAAGTTG TTTCTCTTTTTATTTTCATTTTATTAATTGGTTATACATCTGAAGCTCAGAATCAAATTGGTTCCGAATCAAATCAGTTT TATAAAGTGATTTCATTTGGAGAAAAAATTGATTTCGGAACTATCGATGAATCTGTAACATGGACCATTGCTAATTCTGC AAAGAATATTCACGCTGCAATTCGTGGTAATGAAATTAACAACTATTCATTTGAAGAACCGGGAGAATACGAAATTAATT TTCACGAAAATAAAAAACATGATGAAGAATGCTATCATCCAGCGTTTGAAGAAAGATTTAAAGTAAAAGTTGAATCTGTG AGATTGACTTTTGATTTTTCTAAAATCACTTTTTCTGAAAAAATCACAAGAGGAAGAAATTATAAAGATTTGATAATTAC TGTTCCGGCAAAAATTACAGCAAAAGACAATTCCAATACAAAATTACCTGCACCAGTAATGTCAGTTGCGGGATTAGGGG TTTCATTTACTGTTGAACCAGTAGAAAAAGAGATTGTTATTGGCAATAAAACACAATTATTGAAATATAAAGTATCAGGA ATCGTCGATCAGGAAACGTATCTGATGTTTGATTTTTATGATTTTAATAATCAGGTTCAGACCTATAATCTTCATCAGGT AATAAAATAA
Upstream 100 bases:
>100_bases TTTTATTACAAACAGAAATGCGCCGGATTTCAAAAAAATGAAATCTGAGCGTACAGGGATTTTTTATGCTTTTTTGTGAA TTTTTAATTATTGATTATAT
Downstream 100 bases:
>100_bases TCGAGTTATTTATGATAAAAAACTACTTTAATTTTAATAGTGTATTCAATGTAAAAAAGGCAATTCTTTTGTTTTTTGTT TTTTTTACATTCAGTCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MVNFTYFKNLTCNKNRALKEFLVRFLLFSSAENDFMQIGKNASTTSLNFKKQVVSLFIFILLIGYTSEAQNQIGSESNQF YKVISFGEKIDFGTIDESVTWTIANSAKNIHAAIRGNEINNYSFEEPGEYEINFHENKKHDEECYHPAFEERFKVKVESV RLTFDFSKITFSEKITRGRNYKDLIITVPAKITAKDNSNTKLPAPVMSVAGLGVSFTVEPVEKEIVIGNKTQLLKYKVSG IVDQETYLMFDFYDFNNQVQTYNLHQVIK
Sequences:
>Translated_269_residues MVNFTYFKNLTCNKNRALKEFLVRFLLFSSAENDFMQIGKNASTTSLNFKKQVVSLFIFILLIGYTSEAQNQIGSESNQF YKVISFGEKIDFGTIDESVTWTIANSAKNIHAAIRGNEINNYSFEEPGEYEINFHENKKHDEECYHPAFEERFKVKVESV RLTFDFSKITFSEKITRGRNYKDLIITVPAKITAKDNSNTKLPAPVMSVAGLGVSFTVEPVEKEIVIGNKTQLLKYKVSG IVDQETYLMFDFYDFNNQVQTYNLHQVIK >Mature_269_residues MVNFTYFKNLTCNKNRALKEFLVRFLLFSSAENDFMQIGKNASTTSLNFKKQVVSLFIFILLIGYTSEAQNQIGSESNQF YKVISFGEKIDFGTIDESVTWTIANSAKNIHAAIRGNEINNYSFEEPGEYEINFHENKKHDEECYHPAFEERFKVKVESV RLTFDFSKITFSEKITRGRNYKDLIITVPAKITAKDNSNTKLPAPVMSVAGLGVSFTVEPVEKEIVIGNKTQLLKYKVSG IVDQETYLMFDFYDFNNQVQTYNLHQVIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30929; Mature: 30929
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNFTYFKNLTCNKNRALKEFLVRFLLFSSAENDFMQIGKNASTTSLNFKKQVVSLFIFI CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHH LLIGYTSEAQNQIGSESNQFYKVISFGEKIDFGTIDESVTWTIANSAKNIHAAIRGNEIN HHHCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCC NYSFEEPGEYEINFHENKKHDEECYHPAFEERFKVKVESVRLTFDFSKITFSEKITRGRN CCCCCCCCCEEEEECCCCCCCHHHCCCHHHHHHEEEEEEEEEEEEEHHHHHHHHHHCCCC YKDLIITVPAKITAKDNSNTKLPAPVMSVAGLGVSFTVEPVEKEIVIGNKTQLLKYKVSG CCEEEEECCCEEEECCCCCCCCCCHHHHHHCCCEEEEECCCCEEEEECCCCEEEEEEECC IVDQETYLMFDFYDFNNQVQTYNLHQVIK EECCCEEEEEEEECCCCCEEEEEHHHHCC >Mature Secondary Structure MVNFTYFKNLTCNKNRALKEFLVRFLLFSSAENDFMQIGKNASTTSLNFKKQVVSLFIFI CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHH LLIGYTSEAQNQIGSESNQFYKVISFGEKIDFGTIDESVTWTIANSAKNIHAAIRGNEIN HHHCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCC NYSFEEPGEYEINFHENKKHDEECYHPAFEERFKVKVESVRLTFDFSKITFSEKITRGRN CCCCCCCCCEEEEECCCCCCCHHHCCCHHHHHHEEEEEEEEEEEEEHHHHHHHHHHCCCC YKDLIITVPAKITAKDNSNTKLPAPVMSVAGLGVSFTVEPVEKEIVIGNKTQLLKYKVSG CCEEEEECCCEEEECCCCCCCCCCHHHHHHCCCEEEEECCCCEEEEECCCCEEEEEEECC IVDQETYLMFDFYDFNNQVQTYNLHQVIK EECCCEEEEEEEECCCCCEEEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA