| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301637
Identifier: 146301637
GI number: 146301637
Start: 4644845
End: 4645813
Strand: Reverse
Name: 146301637
Synonym: Fjoh_3898
Alternate gene names: NA
Gene position: 4645813-4644845 (Counterclockwise)
Preceding gene: 146301638
Following gene: 146301636
Centisome position: 76.2
GC content: 28.38
Gene sequence:
>969_bases ATGAAGAATATTTTACTTTTTATCCTCTTATTCTGTACGATATGCAATGCACAGGATACTCCTAATGCAGATATTGCCAA AGAAATTTATTCACCGTCAAATAAAGAAAAACTTGCTGCAGATGCATATGAGGTTTTTAAAACCAATAAATTTCTAGATT TTAAAAATAGGGAAACCCTTATAGAAAAAATTGAAGGTGCTGTTTATAAGAAAATGGATTTGAATGATTATTTCCCAAAT AAAAAAGATTGGGATAAAATTGAAAAGGAAGATATAACCACATTTGAAAAAGAAAAAAATGCCCAATATTCTTATTCAAA TAATACTTTAACTGAAATTAAAACAGAATTTGGAAGTTATAATGTCCGCAAAGAGATAAAAACAATTTACAATTCTAAAT GTTTTGTACTTCTGTATGAGAAAAAGTATTTTGTTGGTGACAATTACAATCGTACAGAAAGCACCATTAATGAGTATATT AATGACAATCAAGTTGTGAAAATAATTAGAAAAATAGAATATCCTAAGAAAGAGAATAATTCACAATCAGTAATCAGGGT AAAATACGAAGATGATATTTTAAACATTGCCAGCGAAAACGGAAGTATTTTATGTGAATTTATTGAGAATAAAATGCCTG CTGAATCTATTTCTAAACTGACTCCAAACCAAACCACAGATTATTTTCGTTATGCTTTAATACAACAGAACATAGGTGCT GCAAAAAAACATTGTACCGAAAAGATGGCACAGAAAATTGAAAGTGTTTTATTGCCTTATCCTAATATTACAGATATTAA CAGTTTGGGAGGAAGTGGCAGTTTTGGTGAAAAAGTAACGATCAATGAAAATTGGGGCATTATTTTGAAAGACAACAAAA CAGAAAAATGCAATGTTGTTTTACGATTTGTTAAACAAAAAAATGGCTGGAAAATAGATGATTTTGAGATTATAAAAAAG CCTTTATAA
Upstream 100 bases:
>100_bases ATAATGATTTGTACGAATTTTAAATAAAAATATTCCATCTTTATATAAGTATCTGAAAAGATATAACAATTGCAATAAAC CAGAACCAATAGAATACTCC
Downstream 100 bases:
>100_bases CAAAGTTTTGTTTTAAGTATCTATAAAAAATAGTAACTTTAATATTCTATGATAAAAAGCTTTAGTAACATATAATAGTT TTATTATTGATTTTAGATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MKNILLFILLFCTICNAQDTPNADIAKEIYSPSNKEKLAADAYEVFKTNKFLDFKNRETLIEKIEGAVYKKMDLNDYFPN KKDWDKIEKEDITTFEKEKNAQYSYSNNTLTEIKTEFGSYNVRKEIKTIYNSKCFVLLYEKKYFVGDNYNRTESTINEYI NDNQVVKIIRKIEYPKKENNSQSVIRVKYEDDILNIASENGSILCEFIENKMPAESISKLTPNQTTDYFRYALIQQNIGA AKKHCTEKMAQKIESVLLPYPNITDINSLGGSGSFGEKVTINENWGIILKDNKTEKCNVVLRFVKQKNGWKIDDFEIIKK PL
Sequences:
>Translated_322_residues MKNILLFILLFCTICNAQDTPNADIAKEIYSPSNKEKLAADAYEVFKTNKFLDFKNRETLIEKIEGAVYKKMDLNDYFPN KKDWDKIEKEDITTFEKEKNAQYSYSNNTLTEIKTEFGSYNVRKEIKTIYNSKCFVLLYEKKYFVGDNYNRTESTINEYI NDNQVVKIIRKIEYPKKENNSQSVIRVKYEDDILNIASENGSILCEFIENKMPAESISKLTPNQTTDYFRYALIQQNIGA AKKHCTEKMAQKIESVLLPYPNITDINSLGGSGSFGEKVTINENWGIILKDNKTEKCNVVLRFVKQKNGWKIDDFEIIKK PL >Mature_322_residues MKNILLFILLFCTICNAQDTPNADIAKEIYSPSNKEKLAADAYEVFKTNKFLDFKNRETLIEKIEGAVYKKMDLNDYFPN KKDWDKIEKEDITTFEKEKNAQYSYSNNTLTEIKTEFGSYNVRKEIKTIYNSKCFVLLYEKKYFVGDNYNRTESTINEYI NDNQVVKIIRKIEYPKKENNSQSVIRVKYEDDILNIASENGSILCEFIENKMPAESISKLTPNQTTDYFRYALIQQNIGA AKKHCTEKMAQKIESVLLPYPNITDINSLGGSGSFGEKVTINENWGIILKDNKTEKCNVVLRFVKQKNGWKIDDFEIIKK PL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37446; Mature: 37446
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNILLFILLFCTICNAQDTPNADIAKEIYSPSNKEKLAADAYEVFKTNKFLDFKNRETL CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHH IEKIEGAVYKKMDLNDYFPNKKDWDKIEKEDITTFEKEKNAQYSYSNNTLTEIKTEFGSY HHHHHHHHEEECCCHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCC NVRKEIKTIYNSKCFVLLYEKKYFVGDNYNRTESTINEYINDNQVVKIIRKIEYPKKENN HHHHHHHHHHCCCEEEEEEECEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC SQSVIRVKYEDDILNIASENGSILCEFIENKMPAESISKLTPNQTTDYFRYALIQQNIGA CCCEEEEEECCCEEEEECCCCCEEHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCH AKKHCTEKMAQKIESVLLPYPNITDINSLGGSGSFGEKVTINENWGIILKDNKTEKCNVV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCHHHHH LRFVKQKNGWKIDDFEIIKKPL HHHHHHCCCCCCCHHHHHCCCC >Mature Secondary Structure MKNILLFILLFCTICNAQDTPNADIAKEIYSPSNKEKLAADAYEVFKTNKFLDFKNRETL CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHH IEKIEGAVYKKMDLNDYFPNKKDWDKIEKEDITTFEKEKNAQYSYSNNTLTEIKTEFGSY HHHHHHHHEEECCCHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCC NVRKEIKTIYNSKCFVLLYEKKYFVGDNYNRTESTINEYINDNQVVKIIRKIEYPKKENN HHHHHHHHHHCCCEEEEEEECEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC SQSVIRVKYEDDILNIASENGSILCEFIENKMPAESISKLTPNQTTDYFRYALIQQNIGA CCCEEEEEECCCEEEEECCCCCEEHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCH AKKHCTEKMAQKIESVLLPYPNITDINSLGGSGSFGEKVTINENWGIILKDNKTEKCNVV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCHHHHH LRFVKQKNGWKIDDFEIIKKPL HHHHHHCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA