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The map label for this gene is 146301445

Identifier: 146301445

GI number: 146301445

Start: 4395567

End: 4396091

Strand: Reverse

Name: 146301445

Synonym: Fjoh_3703

Alternate gene names: NA

Gene position: 4396091-4395567 (Counterclockwise)

Preceding gene: 146301446

Following gene: 146301444

Centisome position: 72.1

GC content: 42.29

Gene sequence:

>525_bases
ATGCAGACCATCGTCTTGAAGCTGGAGCGTGATAATGACCTGAAATTTGCGCTACTCATCGCAACAGGTTCTTACATTGG
TCTTAGAATTTCAGACCTTCTTCAACTAAGATGGAATCAGGTTTTGAATCAGGATTACTTCACAATTACGGAGAAGAAGA
CCAAAAAGACCAGAAAAGTGACCATCAACCCAGAACTGCAGACTATCCTCAGCCGTCTGTTCAATCAGCTCCAAGCCAGC
GAAAATGATTTGATGTTCGCCAACCGCTCAGGAGATAAGCCGTTCAGCATCCAGTATGTGAACAGCAAGCTGAAAGACAT
TTTTGCCAGATACAACGTAAGAGGTCAGTATTCAAGCCATTTTATGAGAAAAACCTTAGGAAGGAGAATTTGGGAGGTCA
ATAAGTACAGTGACCAAGCCTTACTGCTTTTGTCTCAGCTGTTCAACCATTCGAGTGTATCGACCACTAAAATCTATCTT
GGAATCCGAGAACAGGAAATCAGCAATCTGTATCTGAGTGTTTAA

Upstream 100 bases:

>100_bases
TTTCAGATACATATATTAAGGTAGAAAAGTGAAACTAAAATTGAGAATTATGGCATTAAAAGGACAAAAGACAACAAGTG
ATTTTTTAGAGTGGGACAAG

Downstream 100 bases:

>100_bases
AAGTAAGAAATAGATTTCTTTTTTAAGCTTATCTAACTGAATTGAGTTAGGTAATACGGATTAAATTTAAAAAAACAGCA
GTCAATAGTGTTAATTTTAT

Product: phage integrase family protein

Products: NA

Alternate protein names: Integrase; Phage Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family; Integrase/Recombinase; LOW QUALITY PROTEIN Integrase

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MQTIVLKLERDNDLKFALLIATGSYIGLRISDLLQLRWNQVLNQDYFTITEKKTKKTRKVTINPELQTILSRLFNQLQAS
ENDLMFANRSGDKPFSIQYVNSKLKDIFARYNVRGQYSSHFMRKTLGRRIWEVNKYSDQALLLLSQLFNHSSVSTTKIYL
GIREQEISNLYLSV

Sequences:

>Translated_174_residues
MQTIVLKLERDNDLKFALLIATGSYIGLRISDLLQLRWNQVLNQDYFTITEKKTKKTRKVTINPELQTILSRLFNQLQAS
ENDLMFANRSGDKPFSIQYVNSKLKDIFARYNVRGQYSSHFMRKTLGRRIWEVNKYSDQALLLLSQLFNHSSVSTTKIYL
GIREQEISNLYLSV
>Mature_174_residues
MQTIVLKLERDNDLKFALLIATGSYIGLRISDLLQLRWNQVLNQDYFTITEKKTKKTRKVTINPELQTILSRLFNQLQAS
ENDLMFANRSGDKPFSIQYVNSKLKDIFARYNVRGQYSSHFMRKTLGRRIWEVNKYSDQALLLLSQLFNHSSVSTTKIYL
GIREQEISNLYLSV

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20375; Mature: 20375

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: PS00962 RIBOSOMAL_S2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTIVLKLERDNDLKFALLIATGSYIGLRISDLLQLRWNQVLNQDYFTITEKKTKKTRKV
CCEEEEEEECCCCCEEEEEEEECCEEEHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEE
TINPELQTILSRLFNQLQASENDLMFANRSGDKPFSIQYVNSKLKDIFARYNVRGQYSSH
EECHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHCCCCCCHHHH
FMRKTLGRRIWEVNKYSDQALLLLSQLFNHSSVSTTKIYLGIREQEISNLYLSV
HHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEECHHHHCEEEECC
>Mature Secondary Structure
MQTIVLKLERDNDLKFALLIATGSYIGLRISDLLQLRWNQVLNQDYFTITEKKTKKTRKV
CCEEEEEEECCCCCEEEEEEEECCEEEHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEE
TINPELQTILSRLFNQLQASENDLMFANRSGDKPFSIQYVNSKLKDIFARYNVRGQYSSH
EECHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHCCCCCCHHHH
FMRKTLGRRIWEVNKYSDQALLLLSQLFNHSSVSTTKIYLGIREQEISNLYLSV
HHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEECHHHHCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA