| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301425
Identifier: 146301425
GI number: 146301425
Start: 4374572
End: 4375312
Strand: Reverse
Name: 146301425
Synonym: Fjoh_3683
Alternate gene names: NA
Gene position: 4375312-4374572 (Counterclockwise)
Preceding gene: 146301428
Following gene: 146301424
Centisome position: 71.76
GC content: 31.71
Gene sequence:
>741_bases ATGGCATATGAAGATTTCTTAACAGATTGTTTTGGCGAATTACAAAAAATGCAAGATGATTTAAATAAAGCGTATGATAT TAATTCTTTTACAAGTTGGAACTATGACCAGCCGAGTGGCATTATAACACTATCTAAGCCTGATAAAACTATTAATTTCA GATATTATCAAGTTGGAACTTATTCCACAGCATCTAAAACTTGGAAATGGTCGTGGGACAATGAAAATACATCTAAAAAC GTAGTCGTTGATATTGAAAAAATTAAAGGTTTTGGAATTGCAAATAACTATGAAAATCTAATTAATGGGGAATTTCCATC TTATGATGAGATAGGATGGGAATTATCTTCTATCTGCTGTAATTTAATAGGCGGTATTGGCGTGTATAGGCCTGTTGTTG ATCACTTAAAAATTCACATTGTATTAACTGAACTGATTGATAATGATTTAGCAGAAAGAGAAAAGACCAAATATGTTGAT TGCGAAAATCATGAGAGAAGAAGAAGGGCATTTATCTGCCAGCATTTAAAAGAAGGAAGCAAAAACGGATTCGAAGAATC ATTTGAAACATTTGAAGATATGGAATTCGAATATGAAGATGATGATTTTGTGGCTTGGTGTAACGAATGTGAGAAATTGA GAATCAAAGAAGGTGGTTTGTCAGAAAAATGCTGGGAAGAAGGCAAATTTAAAATTGTTTGTGAAAAGTGCTATTTCAAA ATTAAAGAAACAAATACCTAA
Upstream 100 bases:
>100_bases ATTGTTTTTATATTCGTACAAAAATAACACTTAGCATTTTAATCAGAGTTTGTGATTTGCTTATACATTTACAGCTAGGA TTACTATAAAAACATTAGAT
Downstream 100 bases:
>100_bases AATGAAAAATCAAATTCTGATTTTATTAATATTTTTAAAAACGTTAGCAGCCCAAGGGCAAAGTAAAATGGAAAATAAAT TTATCACTTGGGATGATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MAYEDFLTDCFGELQKMQDDLNKAYDINSFTSWNYDQPSGIITLSKPDKTINFRYYQVGTYSTASKTWKWSWDNENTSKN VVVDIEKIKGFGIANNYENLINGEFPSYDEIGWELSSICCNLIGGIGVYRPVVDHLKIHIVLTELIDNDLAEREKTKYVD CENHERRRRAFICQHLKEGSKNGFEESFETFEDMEFEYEDDDFVAWCNECEKLRIKEGGLSEKCWEEGKFKIVCEKCYFK IKETNT
Sequences:
>Translated_246_residues MAYEDFLTDCFGELQKMQDDLNKAYDINSFTSWNYDQPSGIITLSKPDKTINFRYYQVGTYSTASKTWKWSWDNENTSKN VVVDIEKIKGFGIANNYENLINGEFPSYDEIGWELSSICCNLIGGIGVYRPVVDHLKIHIVLTELIDNDLAEREKTKYVD CENHERRRRAFICQHLKEGSKNGFEESFETFEDMEFEYEDDDFVAWCNECEKLRIKEGGLSEKCWEEGKFKIVCEKCYFK IKETNT >Mature_245_residues AYEDFLTDCFGELQKMQDDLNKAYDINSFTSWNYDQPSGIITLSKPDKTINFRYYQVGTYSTASKTWKWSWDNENTSKNV VVDIEKIKGFGIANNYENLINGEFPSYDEIGWELSSICCNLIGGIGVYRPVVDHLKIHIVLTELIDNDLAEREKTKYVDC ENHERRRRAFICQHLKEGSKNGFEESFETFEDMEFEYEDDDFVAWCNECEKLRIKEGGLSEKCWEEGKFKIVCEKCYFKI KETNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28879; Mature: 28748
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYEDFLTDCFGELQKMQDDLNKAYDINSFTSWNYDQPSGIITLSKPDKTINFRYYQVGT CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEECC YSTASKTWKWSWDNENTSKNVVVDIEKIKGFGIANNYENLINGEFPSYDEIGWELSSICC CCCCCCEEEEECCCCCCCCCEEEEEEHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHH NLIGGIGVYRPVVDHLKIHIVLTELIDNDLAEREKTKYVDCENHERRRRAFICQHLKEGS HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC KNGFEESFETFEDMEFEYEDDDFVAWCNECEKLRIKEGGLSEKCWEEGKFKIVCEKCYFK CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEECCCCCCHHHHHCCCEEEEEHHHEEE IKETNT EECCCC >Mature Secondary Structure AYEDFLTDCFGELQKMQDDLNKAYDINSFTSWNYDQPSGIITLSKPDKTINFRYYQVGT CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEECC YSTASKTWKWSWDNENTSKNVVVDIEKIKGFGIANNYENLINGEFPSYDEIGWELSSICC CCCCCCEEEEECCCCCCCCCEEEEEEHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHH NLIGGIGVYRPVVDHLKIHIVLTELIDNDLAEREKTKYVDCENHERRRRAFICQHLKEGS HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC KNGFEESFETFEDMEFEYEDDDFVAWCNECEKLRIKEGGLSEKCWEEGKFKIVCEKCYFK CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEECCCCCCHHHHHCCCEEEEEHHHEEE IKETNT EECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA