| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301361
Identifier: 146301361
GI number: 146301361
Start: 4316490
End: 4317116
Strand: Reverse
Name: 146301361
Synonym: Fjoh_3619
Alternate gene names: NA
Gene position: 4317116-4316490 (Counterclockwise)
Preceding gene: 146301362
Following gene: 146301360
Centisome position: 70.81
GC content: 43.54
Gene sequence:
>627_bases ATGCAGTACTGCCAAACGGCTTCGGTCGCCTTATCTCCGACAAAATGGAAAGCATCAATATTTATGGAAACTTTAGAAAC ACTATTCCGGTCTTTCGAGACAGGAATCCGAAGTGCCAAGGCTTTAAAGCCCAAGCAGTACCTTAAGAGTATCGGACTGG AATATTCAGATCTTCGGATCGGCTTCAATTCAGGCCAGTTCCATCACCGTAAAACCCTCGAGTCCAAGGATGCGTTTGAA AAACTCGGCGTAATTACAAAAAGCGATGCGGGAGTTCGGGATGATTCCTTTACGGCCTATACCGTCTTTGGACGTTACGG GCTTATTTTTCCTCTTCTTGACAGAAACAGCAGGATTGTGAATTTTTTCGCACTGCGTTTTGATCTGGATGAAAAAAAGC AGGATTACCTGAACATTGAAGGAATCTACCCCGCCTATCCGCATCCCCTTACCAAGAAATTATACTTAGCTCCGACAGTC ATTGACTGCGCAAGTTTAATACAGAGTAAAGTACTGGATCAGAGGGAAGCCGTTATAGCGCTTCATGACGGGGAACTGCT CGAACAGCATTTAGAAGTTATTAAATCGTTATATGAACTGGAAGTGATAATAATCTTTAAGCGGTGA
Upstream 100 bases:
>100_bases TGACTTTACAAGACAAACAGTGCCGGCAGTGCCAATTTTTCTACAGCTTCAAAAACACATATTTATATTTACAGGAAGAC TTTAATACTTCTTTGATATA
Downstream 100 bases:
>100_bases TAAAATGGAAAAGATCAGATTACAGATGCAGGAGTTAAGACCCGATGTTCCACTATCTATAGTGGAACTGCCTGAGGGGC ACAGCCTCAATGATATGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MQYCQTASVALSPTKWKASIFMETLETLFRSFETGIRSAKALKPKQYLKSIGLEYSDLRIGFNSGQFHHRKTLESKDAFE KLGVITKSDAGVRDDSFTAYTVFGRYGLIFPLLDRNSRIVNFFALRFDLDEKKQDYLNIEGIYPAYPHPLTKKLYLAPTV IDCASLIQSKVLDQREAVIALHDGELLEQHLEVIKSLYELEVIIIFKR
Sequences:
>Translated_208_residues MQYCQTASVALSPTKWKASIFMETLETLFRSFETGIRSAKALKPKQYLKSIGLEYSDLRIGFNSGQFHHRKTLESKDAFE KLGVITKSDAGVRDDSFTAYTVFGRYGLIFPLLDRNSRIVNFFALRFDLDEKKQDYLNIEGIYPAYPHPLTKKLYLAPTV IDCASLIQSKVLDQREAVIALHDGELLEQHLEVIKSLYELEVIIIFKR >Mature_208_residues MQYCQTASVALSPTKWKASIFMETLETLFRSFETGIRSAKALKPKQYLKSIGLEYSDLRIGFNSGQFHHRKTLESKDAFE KLGVITKSDAGVRDDSFTAYTVFGRYGLIFPLLDRNSRIVNFFALRFDLDEKKQDYLNIEGIYPAYPHPLTKKLYLAPTV IDCASLIQSKVLDQREAVIALHDGELLEQHLEVIKSLYELEVIIIFKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23879; Mature: 23879
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYCQTASVALSPTKWKASIFMETLETLFRSFETGIRSAKALKPKQYLKSIGLEYSDLRI CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEHEEE GFNSGQFHHRKTLESKDAFEKLGVITKSDAGVRDDSFTAYTVFGRYGLIFPLLDRNSRIV ECCCCCCHHHHHCCHHHHHHHHCCEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEE NFFALRFDLDEKKQDYLNIEGIYPAYPHPLTKKLYLAPTVIDCASLIQSKVLDQREAVIA EEEEEEECCCCHHHHCEECCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHCCCCEEEE LHDGELLEQHLEVIKSLYELEVIIIFKR EECCHHHHHHHHHHHHHHHEEEEEEEEC >Mature Secondary Structure MQYCQTASVALSPTKWKASIFMETLETLFRSFETGIRSAKALKPKQYLKSIGLEYSDLRI CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEHEEE GFNSGQFHHRKTLESKDAFEKLGVITKSDAGVRDDSFTAYTVFGRYGLIFPLLDRNSRIV ECCCCCCHHHHHCCHHHHHHHHCCEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEE NFFALRFDLDEKKQDYLNIEGIYPAYPHPLTKKLYLAPTVIDCASLIQSKVLDQREAVIA EEEEEEECCCCHHHHCEECCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHCCCCEEEE LHDGELLEQHLEVIKSLYELEVIIIFKR EECCHHHHHHHHHHHHHHHEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA