Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146301316

Identifier: 146301316

GI number: 146301316

Start: 4265900

End: 4267306

Strand: Reverse

Name: 146301316

Synonym: Fjoh_3574

Alternate gene names: NA

Gene position: 4267306-4265900 (Counterclockwise)

Preceding gene: 146301327

Following gene: 146301315

Centisome position: 69.99

GC content: 31.13

Gene sequence:

>1407_bases
ATGGATATTATAAGTGACGTCGAAGTAAAAGTTGAATTAGATAATATTGCTGGAAAATTTCCTGCATTTAGCGGTAAAAA
TTACCCACTAGAATATTTAGGAGCCAGAGAATTTGAACTGCTATCATATTTTATTTTTAAAAAAGATATCGAAAATGGGA
TCTACAAGAATAAAATTGATTCGGTCTTACTTATGAAGGGAGGCAGTGATCGTGGAAGGGATTTATTGCTTCAATTCAAA
TCAAAGAATGTTGGGATATTACAATGTAAAAGATATGAAGGATTAATAACCAAGCCGGGACTTGGTAGAGAAATTATAAA
GTTTGCAATTCATGCTATAAAGGATAAAAGTTTAATTACTGACTTAGAAGACTTCACATATTATTTTGTCGCACTAAAAG
GATTTAATGAACCGGCGACCAAGTTTTTAACTGATTATAATAAAGATGCAATAGATGAGGTATTGTTAAAGCCTTGGACG
GAAGAAGTATTAGCTGACAATGAATCATTAAAACATCTAAAATATGAGAATATTTTTGATGATCTTATTTCAATTCTCAG
TAAAATAAAAATAGAGCCAATTACCGGGCATGATCTGGATCAGAAACTAAAAAATAGCAAAGATATCTTAGCTATGTTTT
TCGAAGTTGAAAAAGTTGCGAGTGAAGATATGCTTAGAACGGTACTTGCTGAATTTACTGGTTTTAAAAATGATCAAGAT
TTAGAAAAGTTACGTGTTAAGCTTCAGCATATCCCAAAAGAAAAAAGAATGTATTTTGGTTTGTTTGATGTCTACGGATA
TGATTTAGGTTTTTATAAAAGGATTACGAGAGATGCAGAGCTAATTAATAAGTTAACCGTAATCAGGTCTGAATTTTCTA
AACATTTTGTAGAATATTTAGGTGAAGAAATAAATAAATACATTTTACTCTTTATTTCAGGAAAGACTGATGTTTCCCCA
TTTACTAAATCCATACTAAATCCATATCTGTTCAATAAGTTTGCAGCAATTTACAGCAGAAGTGAATTAGGTTTTTTAAA
AGACCTGCTTACCGAAGGTGCAGTAGCAGATTTAAAAGAATCAATTGAAGACCACAAAAACGATGCTTTGAAAATTGGTC
AAATGGTTTTAAATGGTGATTATTCTTCCTTTTATGGAGAAGGAGAACTGTTGGAAATGAAAATAAATTTAGCTAAATTT
CTGTATTGCGATTTTAATTCTGTGGATGAGATGGATACCCGTTTTAAAGAAGACATGAAAATCGTTAAGCCTATACTAGA
TTATATAGAGTCGGAAATTCAAAAAATAATGCCTACCAATCCTACAATTATTTTGGGTAATGGAGGATTGGGTGAGTCGG
AAGAAGAACTTAGAGAATTATTCGAAAAAGTTCAGAAGCTCAATTAG

Upstream 100 bases:

>100_bases
ATTTTTTCGAATTAATAATGTTTTTTTATTATTTCATTATAACAGATCTATCTTTGAATGTAAATTCATATTTTTGATTG
AAATCAAATTTTCTCTGTAA

Downstream 100 bases:

>100_bases
ACTGACGTTTAATATTTTATGTATTTAAAGGAGGATCTGTTAAGTACATTAATTTACCAATTGTAAAAATATGGATAAGG
AGAATGAGTTTGAAAATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MDIISDVEVKVELDNIAGKFPAFSGKNYPLEYLGAREFELLSYFIFKKDIENGIYKNKIDSVLLMKGGSDRGRDLLLQFK
SKNVGILQCKRYEGLITKPGLGREIIKFAIHAIKDKSLITDLEDFTYYFVALKGFNEPATKFLTDYNKDAIDEVLLKPWT
EEVLADNESLKHLKYENIFDDLISILSKIKIEPITGHDLDQKLKNSKDILAMFFEVEKVASEDMLRTVLAEFTGFKNDQD
LEKLRVKLQHIPKEKRMYFGLFDVYGYDLGFYKRITRDAELINKLTVIRSEFSKHFVEYLGEEINKYILLFISGKTDVSP
FTKSILNPYLFNKFAAIYSRSELGFLKDLLTEGAVADLKESIEDHKNDALKIGQMVLNGDYSSFYGEGELLEMKINLAKF
LYCDFNSVDEMDTRFKEDMKIVKPILDYIESEIQKIMPTNPTIILGNGGLGESEEELRELFEKVQKLN

Sequences:

>Translated_468_residues
MDIISDVEVKVELDNIAGKFPAFSGKNYPLEYLGAREFELLSYFIFKKDIENGIYKNKIDSVLLMKGGSDRGRDLLLQFK
SKNVGILQCKRYEGLITKPGLGREIIKFAIHAIKDKSLITDLEDFTYYFVALKGFNEPATKFLTDYNKDAIDEVLLKPWT
EEVLADNESLKHLKYENIFDDLISILSKIKIEPITGHDLDQKLKNSKDILAMFFEVEKVASEDMLRTVLAEFTGFKNDQD
LEKLRVKLQHIPKEKRMYFGLFDVYGYDLGFYKRITRDAELINKLTVIRSEFSKHFVEYLGEEINKYILLFISGKTDVSP
FTKSILNPYLFNKFAAIYSRSELGFLKDLLTEGAVADLKESIEDHKNDALKIGQMVLNGDYSSFYGEGELLEMKINLAKF
LYCDFNSVDEMDTRFKEDMKIVKPILDYIESEIQKIMPTNPTIILGNGGLGESEEELRELFEKVQKLN
>Mature_468_residues
MDIISDVEVKVELDNIAGKFPAFSGKNYPLEYLGAREFELLSYFIFKKDIENGIYKNKIDSVLLMKGGSDRGRDLLLQFK
SKNVGILQCKRYEGLITKPGLGREIIKFAIHAIKDKSLITDLEDFTYYFVALKGFNEPATKFLTDYNKDAIDEVLLKPWT
EEVLADNESLKHLKYENIFDDLISILSKIKIEPITGHDLDQKLKNSKDILAMFFEVEKVASEDMLRTVLAEFTGFKNDQD
LEKLRVKLQHIPKEKRMYFGLFDVYGYDLGFYKRITRDAELINKLTVIRSEFSKHFVEYLGEEINKYILLFISGKTDVSP
FTKSILNPYLFNKFAAIYSRSELGFLKDLLTEGAVADLKESIEDHKNDALKIGQMVLNGDYSSFYGEGELLEMKINLAKF
LYCDFNSVDEMDTRFKEDMKIVKPILDYIESEIQKIMPTNPTIILGNGGLGESEEELRELFEKVQKLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53969; Mature: 53969

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIISDVEVKVELDNIAGKFPAFSGKNYPLEYLGAREFELLSYFIFKKDIENGIYKNKID
CCCCCCCEEEEEEHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCHHHHCCC
SVLLMKGGSDRGRDLLLQFKSKNVGILQCKRYEGLITKPGLGREIIKFAIHAIKDKSLIT
EEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHH
DLEDFTYYFVALKGFNEPATKFLTDYNKDAIDEVLLKPWTEEVLADNESLKHLKYENIFD
HHHHHHEEEEEEECCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHH
DLISILSKIKIEPITGHDLDQKLKNSKDILAMFFEVEKVASEDMLRTVLAEFTGFKNDQD
HHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LEKLRVKLQHIPKEKRMYFGLFDVYGYDLGFYKRITRDAELINKLTVIRSEFSKHFVEYL
HHHHHHHHHHCCHHHHHHEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEEINKYILLFISGKTDVSPFTKSILNPYLFNKFAAIYSRSELGFLKDLLTEGAVADLKE
HHHHCEEEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH
SIEDHKNDALKIGQMVLNGDYSSFYGEGELLEMKINLAKFLYCDFNSVDEMDTRFKEDMK
HHHHHCCHHHHHHHHHCCCCHHHHCCCCCEEEEEECHHHHEEECCCCHHHHHHHHHHHHH
IVKPILDYIESEIQKIMPTNPTIILGNGGLGESEEELRELFEKVQKLN
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDIISDVEVKVELDNIAGKFPAFSGKNYPLEYLGAREFELLSYFIFKKDIENGIYKNKID
CCCCCCCEEEEEEHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCHHHHCCC
SVLLMKGGSDRGRDLLLQFKSKNVGILQCKRYEGLITKPGLGREIIKFAIHAIKDKSLIT
EEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHH
DLEDFTYYFVALKGFNEPATKFLTDYNKDAIDEVLLKPWTEEVLADNESLKHLKYENIFD
HHHHHHEEEEEEECCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHH
DLISILSKIKIEPITGHDLDQKLKNSKDILAMFFEVEKVASEDMLRTVLAEFTGFKNDQD
HHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LEKLRVKLQHIPKEKRMYFGLFDVYGYDLGFYKRITRDAELINKLTVIRSEFSKHFVEYL
HHHHHHHHHHCCHHHHHHEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEEINKYILLFISGKTDVSPFTKSILNPYLFNKFAAIYSRSELGFLKDLLTEGAVADLKE
HHHHCEEEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH
SIEDHKNDALKIGQMVLNGDYSSFYGEGELLEMKINLAKFLYCDFNSVDEMDTRFKEDMK
HHHHHCCHHHHHHHHHCCCCHHHHCCCCCEEEEEECHHHHEEECCCCHHHHHHHHHHHHH
IVKPILDYIESEIQKIMPTNPTIILGNGGLGESEEELRELFEKVQKLN
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA