| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301307
Identifier: 146301307
GI number: 146301307
Start: 4257237
End: 4257656
Strand: Reverse
Name: 146301307
Synonym: Fjoh_3565
Alternate gene names: NA
Gene position: 4257656-4257237 (Counterclockwise)
Preceding gene: 146301309
Following gene: 146301303
Centisome position: 69.83
GC content: 38.57
Gene sequence:
>420_bases ATGTATGACCTTCACCGATTCATTGAAGCCCAGAGTAAAACGTATGATGATGCGCTTAGAGAAATCCAGAATGGTAAGAA ACAGACACATTGGATGTGGTTTATATTTCCGCAGATAAAAGGGCTGGGTTTCACGGATTACAATATATTTTATGGTATTG AAAACCTTCATGAAGCCCAGCGGTATTACGATCATCCTGTGCTGGGAAAAAGGCTTGTTGAGATTACAAATGCACTGCTT GAGATTGAAAACAAAAGCGCACTTGAAATTATGGGAAAACCGGACGAAAGAAAACTCAGGTCCTGTATGACTTTATTTAG CCTTCTGCCCAATGCATCTGCCTGTTTTTTACATGTGCTTAAGAAATACTATGATGGAGAAAGGGATGAAAGAACTATTG AAATCCTTCGATTTCAATAA
Upstream 100 bases:
>100_bases TTAAAAATTGCTTTGCTGCTAAAAGGTATTTTTTTTGATTTTATTGATGTAAATTTATATGAACTTTAAAATTTCTCAAC GTTTATAATTTATATGAAAT
Downstream 100 bases:
>100_bases AAAAAACTACTTTCGGCCGTCCAGATATTTAAAAAAGGAAATCAAAATGCTACGTGTAAAACTGCTTAATTTTTCTTCTT AATAATGAGATGTTTCAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: ADP-Ribose Pyrophosphatase With Conserved Domain; NUDIX Family Protein Hydrolase
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MYDLHRFIEAQSKTYDDALREIQNGKKQTHWMWFIFPQIKGLGFTDYNIFYGIENLHEAQRYYDHPVLGKRLVEITNALL EIENKSALEIMGKPDERKLRSCMTLFSLLPNASACFLHVLKKYYDGERDERTIEILRFQ
Sequences:
>Translated_139_residues MYDLHRFIEAQSKTYDDALREIQNGKKQTHWMWFIFPQIKGLGFTDYNIFYGIENLHEAQRYYDHPVLGKRLVEITNALL EIENKSALEIMGKPDERKLRSCMTLFSLLPNASACFLHVLKKYYDGERDERTIEILRFQ >Mature_139_residues MYDLHRFIEAQSKTYDDALREIQNGKKQTHWMWFIFPQIKGLGFTDYNIFYGIENLHEAQRYYDHPVLGKRLVEITNALL EIENKSALEIMGKPDERKLRSCMTLFSLLPNASACFLHVLKKYYDGERDERTIEILRFQ
Specific function: Unknown
COG id: COG5579
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16581; Mature: 16581
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDLHRFIEAQSKTYDDALREIQNGKKQTHWMWFIFPQIKGLGFTDYNIFYGIENLHEAQ CCHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHH RYYDHPVLGKRLVEITNALLEIENKSALEIMGKPDERKLRSCMTLFSLLPNASACFLHVL HHHCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHH KKYYDGERDERTIEILRFQ HHHHCCCCCCCCEEEEECC >Mature Secondary Structure MYDLHRFIEAQSKTYDDALREIQNGKKQTHWMWFIFPQIKGLGFTDYNIFYGIENLHEAQ CCHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHH RYYDHPVLGKRLVEITNALLEIENKSALEIMGKPDERKLRSCMTLFSLLPNASACFLHVL HHHCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHH KKYYDGERDERTIEILRFQ HHHHCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA