Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301302

Identifier: 146301302

GI number: 146301302

Start: 4251209

End: 4252732

Strand: Reverse

Name: 146301302

Synonym: Fjoh_3560

Alternate gene names: NA

Gene position: 4252732-4251209 (Counterclockwise)

Preceding gene: 146301303

Following gene: 146301301

Centisome position: 69.75

GC content: 37.4

Gene sequence:

>1524_bases
ATGAAAGTCCAGTTTAATTTTAGGAGTGCGGTTATTGAAATTATCTGTATGTTATATGTCCTGCTTTTTGTCTATGCGGC
AACAAGCAAATTATTGGATTTTCAGCATTTTAAAATTGAGCTAGGACAGTCGCCTTTACTGAGTGCGTTTGCAGAATGGA
TAGCGGTTCTGGTTCCGGCCGCTGAATATATTACATGCCTGCTTCTCATTATTCCAAGATTTAGGCTGACGGGATTATTC
TTAGCTTATGGGTTAATGGTAATGTTTACGGTTTACATTTTTATTATTCTGAACTATACGTCCTTTGTGCCCTGTTCTTG
CGGAGGAGTATTGGAAAAACTGGATTGGAAGTCACATATGATTTTTAATCTGGTCTTTGTATGCTTAGCTGTACTGGGGA
TTCTTCTTCATGTACGCAGAAATAAAATGAATGGTCATCAGATTAAAAGAGTAAAGATAATAAGAGCATTCTCGGCGGTG
ACAGTTTGCGGTATCTGCATAGTAAGTATATTGTTTATAATTTCAGAAAACATTATACATTATCACAATAAACTGACCAG
ACGCTTTCCACAGACACCAATTCAGCAGGAGGCGGTGGCCGATCTGAAACTGAATTCGTTTTATATTGCAGGGGTTGACG
ACTCACATGTTTATTTAGGAAATACCACCGCTCCTCTTTTAGTAACTACTTTAAATACGCGTTTATTTAAAACAGATGAA
AAGATGATTGACCTGGCGCGCAAAGACCTGCCGTTCCGCGCCGTTAAGATCTCCGTGCAGAGCCCATATTTTTTTGTTAC
CGATGGTACTATTCCTGTTGTTTTTAGGGGAAGAATTCAAGAATGGAAAGCTAAACTTGTATTTATTGGAGGTGAATATT
TCACGACGGCTTTGGCCTTGGATTCCTTAACGGTTGCCGTAGTCACTAATAATTCAAAAACGGGTGATAATGTTCTGGGT
ACCATTACCGTTGGCAAGAATGGAAAAACAATCTTAAATCCGTTAATACTGCAAAAGCAGGTGGATGGTGTTTTTGATAC
TGACGGCCATCTTCTTTACAGCAAAGCGATGGATAAGGTTGTGTTTCTGTACTACTATCGGAATCAGTTTACTATTGCGG
ACAAAAGTTTAAAAATTACGGACAAGGGGACTACAATTGACACGATAACAAAAGCCCAGTTAAATATTGTCCGGGATAAA
AAGCACCACCAGCGAAAGTTTTCCAGCCCTCCTTTGTTTGTGAATAAAAACTGCAGCTTATATAGAAATTTACTTTTTGT
TAATTCGGCTATACCAGGGCGTTATGAAGATGACAGAATATGGAAAGAAGCCAGTATTATAGACGTGTATAATTTAAACG
ACAAGAGCTATCTCATGAGCTTTTGCATATACAATCTGGAAGGTAAAAAAATGAAAAGTTTTACTGTACTGGATGATAAG
ATATATGTACTTGTAGGAACAAAGATCATTCGATATAAAATAGGGATGAAAATCACCTCAAAATATATAACAAAAGACAA
ATAA

Upstream 100 bases:

>100_bases
ACGTTTTTGAAACCTGTTTTTCGATTTATTCGGTCTAGCTTTGTAAAAGATTTCACGTTGGTTCGGTCCTGTAACGGAAT
ATTAATTTAGATATGAGAAT

Downstream 100 bases:

>100_bases
TCTATTGGCCAAGTAGCAGGGATTTGATCGAAAACCTGTAAAAAAGAGTAGATCATTAACCATATAAATTATATTATTAT
GAAATCAAATGTTTTTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MKVQFNFRSAVIEIICMLYVLLFVYAATSKLLDFQHFKIELGQSPLLSAFAEWIAVLVPAAEYITCLLLIIPRFRLTGLF
LAYGLMVMFTVYIFIILNYTSFVPCSCGGVLEKLDWKSHMIFNLVFVCLAVLGILLHVRRNKMNGHQIKRVKIIRAFSAV
TVCGICIVSILFIISENIIHYHNKLTRRFPQTPIQQEAVADLKLNSFYIAGVDDSHVYLGNTTAPLLVTTLNTRLFKTDE
KMIDLARKDLPFRAVKISVQSPYFFVTDGTIPVVFRGRIQEWKAKLVFIGGEYFTTALALDSLTVAVVTNNSKTGDNVLG
TITVGKNGKTILNPLILQKQVDGVFDTDGHLLYSKAMDKVVFLYYYRNQFTIADKSLKITDKGTTIDTITKAQLNIVRDK
KHHQRKFSSPPLFVNKNCSLYRNLLFVNSAIPGRYEDDRIWKEASIIDVYNLNDKSYLMSFCIYNLEGKKMKSFTVLDDK
IYVLVGTKIIRYKIGMKITSKYITKDK

Sequences:

>Translated_507_residues
MKVQFNFRSAVIEIICMLYVLLFVYAATSKLLDFQHFKIELGQSPLLSAFAEWIAVLVPAAEYITCLLLIIPRFRLTGLF
LAYGLMVMFTVYIFIILNYTSFVPCSCGGVLEKLDWKSHMIFNLVFVCLAVLGILLHVRRNKMNGHQIKRVKIIRAFSAV
TVCGICIVSILFIISENIIHYHNKLTRRFPQTPIQQEAVADLKLNSFYIAGVDDSHVYLGNTTAPLLVTTLNTRLFKTDE
KMIDLARKDLPFRAVKISVQSPYFFVTDGTIPVVFRGRIQEWKAKLVFIGGEYFTTALALDSLTVAVVTNNSKTGDNVLG
TITVGKNGKTILNPLILQKQVDGVFDTDGHLLYSKAMDKVVFLYYYRNQFTIADKSLKITDKGTTIDTITKAQLNIVRDK
KHHQRKFSSPPLFVNKNCSLYRNLLFVNSAIPGRYEDDRIWKEASIIDVYNLNDKSYLMSFCIYNLEGKKMKSFTVLDDK
IYVLVGTKIIRYKIGMKITSKYITKDK
>Mature_507_residues
MKVQFNFRSAVIEIICMLYVLLFVYAATSKLLDFQHFKIELGQSPLLSAFAEWIAVLVPAAEYITCLLLIIPRFRLTGLF
LAYGLMVMFTVYIFIILNYTSFVPCSCGGVLEKLDWKSHMIFNLVFVCLAVLGILLHVRRNKMNGHQIKRVKIIRAFSAV
TVCGICIVSILFIISENIIHYHNKLTRRFPQTPIQQEAVADLKLNSFYIAGVDDSHVYLGNTTAPLLVTTLNTRLFKTDE
KMIDLARKDLPFRAVKISVQSPYFFVTDGTIPVVFRGRIQEWKAKLVFIGGEYFTTALALDSLTVAVVTNNSKTGDNVLG
TITVGKNGKTILNPLILQKQVDGVFDTDGHLLYSKAMDKVVFLYYYRNQFTIADKSLKITDKGTTIDTITKAQLNIVRDK
KHHQRKFSSPPLFVNKNCSLYRNLLFVNSAIPGRYEDDRIWKEASIIDVYNLNDKSYLMSFCIYNLEGKKMKSFTVLDDK
IYVLVGTKIIRYKIGMKITSKYITKDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57787; Mature: 57787

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVQFNFRSAVIEIICMLYVLLFVYAATSKLLDFQHFKIELGQSPLLSAFAEWIAVLVPA
CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHCH
AEYITCLLLIIPRFRLTGLFLAYGLMVMFTVYIFIILNYTSFVPCSCGGVLEKLDWKSHM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHH
IFNLVFVCLAVLGILLHVRRNKMNGHQIKRVKIIRAFSAVTVCGICIVSILFIISENIIH
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YHNKLTRRFPQTPIQQEAVADLKLNSFYIAGVDDSHVYLGNTTAPLLVTTLNTRLFKTDE
HHHHHHHHCCCCCCCHHHHHCEEECEEEEEECCCCEEEECCCCCCEEEEEECCCEEECHH
KMIDLARKDLPFRAVKISVQSPYFFVTDGTIPVVFRGRIQEWKAKLVFIGGEYFTTALAL
HHHHHHHCCCCEEEEEEEECCCEEEEECCCEEEEEECCHHCCCEEEEEECCHHHHHHHHH
DSLTVAVVTNNSKTGDNVLGTITVGKNGKTILNPLILQKQVDGVFDTDGHLLYSKAMDKV
CCEEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHE
VFLYYYRNQFTIADKSLKITDKGTTIDTITKAQLNIVRDKKHHQRKFSSPPLFVNKNCSL
EEEEEECCEEEEECCEEEEEECCCEEEHHHHHHHHHHHCCHHHHHHCCCCCEEEECCHHH
YRNLLFVNSAIPGRYEDDRIWKEASIIDVYNLNDKSYLMSFCIYNLEGKKMKSFTVLDDK
HHHHHEEECCCCCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEECCE
IYVLVGTKIIRYKIGMKITSKYITKDK
EEEEECCEEEEEEECCEEEEHHHCCCC
>Mature Secondary Structure
MKVQFNFRSAVIEIICMLYVLLFVYAATSKLLDFQHFKIELGQSPLLSAFAEWIAVLVPA
CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHCH
AEYITCLLLIIPRFRLTGLFLAYGLMVMFTVYIFIILNYTSFVPCSCGGVLEKLDWKSHM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHH
IFNLVFVCLAVLGILLHVRRNKMNGHQIKRVKIIRAFSAVTVCGICIVSILFIISENIIH
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YHNKLTRRFPQTPIQQEAVADLKLNSFYIAGVDDSHVYLGNTTAPLLVTTLNTRLFKTDE
HHHHHHHHCCCCCCCHHHHHCEEECEEEEEECCCCEEEECCCCCCEEEEEECCCEEECHH
KMIDLARKDLPFRAVKISVQSPYFFVTDGTIPVVFRGRIQEWKAKLVFIGGEYFTTALAL
HHHHHHHCCCCEEEEEEEECCCEEEEECCCEEEEEECCHHCCCEEEEEECCHHHHHHHHH
DSLTVAVVTNNSKTGDNVLGTITVGKNGKTILNPLILQKQVDGVFDTDGHLLYSKAMDKV
CCEEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHE
VFLYYYRNQFTIADKSLKITDKGTTIDTITKAQLNIVRDKKHHQRKFSSPPLFVNKNCSL
EEEEEECCEEEEECCEEEEEECCCEEEHHHHHHHHHHHCCHHHHHHCCCCCEEEECCHHH
YRNLLFVNSAIPGRYEDDRIWKEASIIDVYNLNDKSYLMSFCIYNLEGKKMKSFTVLDDK
HHHHHEEECCCCCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEECCE
IYVLVGTKIIRYKIGMKITSKYITKDK
EEEEECCEEEEEEECCEEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA