| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301297
Identifier: 146301297
GI number: 146301297
Start: 4242898
End: 4243227
Strand: Reverse
Name: 146301297
Synonym: Fjoh_3555
Alternate gene names: NA
Gene position: 4243227-4242898 (Counterclockwise)
Preceding gene: 146301301
Following gene: 146301294
Centisome position: 69.6
GC content: 28.18
Gene sequence:
>330_bases ATGGCTTTAAAAAATGAAAATAGCAAACCTGTCATGAAACCACAGAAAACGAAAGTATTTCTAGTGGATCAGCATGTTTG TAATTTTATAAAAGAAGAATGGATGAAGGATATTGATTCATTCAGAGATTGGGCAAGACAACATAACGTTCACGAATCGA TAGCTCGAAAAATCAATCAAATAGAAGGTTATAAGATTCCGGTTTCTACTTTAAAAATTATTTGCTTTTATAGACAAATT ACTTTAGCAGATTTTTTCAAATTAGTTGAAAATAAATATGGAGATGCAGAGGATAAATTTTATTACATAGAAAAAAAGAA AGATGTTTAA
Upstream 100 bases:
>100_bases TATCGCAAATATATGTATTTGATAACAAATATAGAATAATATTTTGAATCGCACACTATCGTGTGCAGAAAAAATATAAT TATTCAATTCTTTTGTCTTA
Downstream 100 bases:
>100_bases AACATCTTTCTTTTTTTTTTTTATTTTTTTGATTCTTCAATAGAAACTTTTCTGAACTCTTTTAAAAGTTTCTCAATTTC TAAAGATGCTTTACGAGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MALKNENSKPVMKPQKTKVFLVDQHVCNFIKEEWMKDIDSFRDWARQHNVHESIARKINQIEGYKIPVSTLKIICFYRQI TLADFFKLVENKYGDAEDKFYYIEKKKDV
Sequences:
>Translated_109_residues MALKNENSKPVMKPQKTKVFLVDQHVCNFIKEEWMKDIDSFRDWARQHNVHESIARKINQIEGYKIPVSTLKIICFYRQI TLADFFKLVENKYGDAEDKFYYIEKKKDV >Mature_108_residues ALKNENSKPVMKPQKTKVFLVDQHVCNFIKEEWMKDIDSFRDWARQHNVHESIARKINQIEGYKIPVSTLKIICFYRQIT LADFFKLVENKYGDAEDKFYYIEKKKDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13105; Mature: 12974
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKNENSKPVMKPQKTKVFLVDQHVCNFIKEEWMKDIDSFRDWARQHNVHESIARKINQ CCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH IEGYKIPVSTLKIICFYRQITLADFFKLVENKYGDAEDKFYYIEKKKDV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC >Mature Secondary Structure ALKNENSKPVMKPQKTKVFLVDQHVCNFIKEEWMKDIDSFRDWARQHNVHESIARKINQ CCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH IEGYKIPVSTLKIICFYRQITLADFFKLVENKYGDAEDKFYYIEKKKDV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA