Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301248

Identifier: 146301248

GI number: 146301248

Start: 4181596

End: 4182732

Strand: Reverse

Name: 146301248

Synonym: Fjoh_3506

Alternate gene names: NA

Gene position: 4182732-4181596 (Counterclockwise)

Preceding gene: 146301260

Following gene: 146301247

Centisome position: 68.6

GC content: 33.42

Gene sequence:

>1137_bases
ATGAAAAATGCTTTTTTTGTTCTGCTTTTTGTCGTTTTAAGCTCGGGTAACCGTGAAAATGACCATAAAGTAATTCGTTC
CTTTTGTTACTGGAAAACTAATCTTTACTTTCAGGAAGAAGACGATTCTCTGGTAAATAAACTAGATGTAAAACACATGT
ATGTTCGTTTTTTTGATGTTGATTATAATCCGTACTCAAAAGAACCGCTGCCTGTTGCCACTATTTGGGATATTTCGTTT
AATAAAAGCAATCCCGAAATCACACCGAGTATTTTTATAACGAATGAAGTTGTTTTAAAATCAGATACGAAACAGTTAGA
CAGTCTGGCAGTCAGGATGGCAAAACGAATCGAACAGATTGGTAAAAAAATGAATGACACAAAAGCTGATATTATAGCTT
CGAATATTGTGTACCCAAAAGATTATTATAAGCAGAAAGACTATAAACCTTTAAATTATGATTCAGTAAGAGCAGCAGAA
TCAGCCAAATTAAAAGTGGCATTTAAAGAAATTCTAATAGACTGCGACTGGACCGAAAAATCTCAGAAGAATTATTTCTA
TTTATTAAAACAAATTAAAAGCCAGCTGCCATCTTCAAAAATAGCAGCAACCATACGACTGTGGCAGTATAAATATGCTT
CAAAAGCCGGAATTCCGCCGGTAGATAAGGGTTTGCTGATGTGCTATAATATTACAAAACCAGACGATTTACAGACTAAA
AATTCTATTGCAACAAGCGAAGAATTAGCACAATATATTACGCACGGCGATTATAAACTTAAACTAGACATTGCACTGCC
ATTATACAGCTGGGCGGTTGCTTTTAGAGGAAATCAGTTTAAAGGTATTTTGTCTGATTATGATCAGTTGATAAAGGATA
CAAGTAAAGTAAAGAAAACTTCAGATACCCAATATGTTTTGCAGGATGATGTTTTAGTCGGGCAGACGTATCTTAGAAAT
GGTGATGAAATTAGAATTGAGAAAATTTCAGACAGCGAACTTGACAAGATGATTTCGATTATTAAAAACAAAATCCAGAT
TGATAATCAGACAAAAGTGACTTTTTTCTCTTTTGATAAAAAATACATAAACGATTATGGAACCGAAAATATCTCCAATT
ATTATGCGCGCTTTTAG

Upstream 100 bases:

>100_bases
CAAAGGTAAGAATACAAAGCAAAAGTTGTTCATAAATAAATCATATTGTTATAAATTTTAATACTAATTTTGAACTATAT
TTTGTAAGTTTTTTATTATC

Downstream 100 bases:

>100_bases
CAGTTTACTTTTAGTTTTAAGCGTTCAGTTTTCATTTGCGTGCGGATGGCAGGTTTCTCCTGAAACCAGCCGTTTGGCTT
TGTTTAAAGCACAAAGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MKNAFFVLLFVVLSSGNRENDHKVIRSFCYWKTNLYFQEEDDSLVNKLDVKHMYVRFFDVDYNPYSKEPLPVATIWDISF
NKSNPEITPSIFITNEVVLKSDTKQLDSLAVRMAKRIEQIGKKMNDTKADIIASNIVYPKDYYKQKDYKPLNYDSVRAAE
SAKLKVAFKEILIDCDWTEKSQKNYFYLLKQIKSQLPSSKIAATIRLWQYKYASKAGIPPVDKGLLMCYNITKPDDLQTK
NSIATSEELAQYITHGDYKLKLDIALPLYSWAVAFRGNQFKGILSDYDQLIKDTSKVKKTSDTQYVLQDDVLVGQTYLRN
GDEIRIEKISDSELDKMISIIKNKIQIDNQTKVTFFSFDKKYINDYGTENISNYYARF

Sequences:

>Translated_378_residues
MKNAFFVLLFVVLSSGNRENDHKVIRSFCYWKTNLYFQEEDDSLVNKLDVKHMYVRFFDVDYNPYSKEPLPVATIWDISF
NKSNPEITPSIFITNEVVLKSDTKQLDSLAVRMAKRIEQIGKKMNDTKADIIASNIVYPKDYYKQKDYKPLNYDSVRAAE
SAKLKVAFKEILIDCDWTEKSQKNYFYLLKQIKSQLPSSKIAATIRLWQYKYASKAGIPPVDKGLLMCYNITKPDDLQTK
NSIATSEELAQYITHGDYKLKLDIALPLYSWAVAFRGNQFKGILSDYDQLIKDTSKVKKTSDTQYVLQDDVLVGQTYLRN
GDEIRIEKISDSELDKMISIIKNKIQIDNQTKVTFFSFDKKYINDYGTENISNYYARF
>Mature_378_residues
MKNAFFVLLFVVLSSGNRENDHKVIRSFCYWKTNLYFQEEDDSLVNKLDVKHMYVRFFDVDYNPYSKEPLPVATIWDISF
NKSNPEITPSIFITNEVVLKSDTKQLDSLAVRMAKRIEQIGKKMNDTKADIIASNIVYPKDYYKQKDYKPLNYDSVRAAE
SAKLKVAFKEILIDCDWTEKSQKNYFYLLKQIKSQLPSSKIAATIRLWQYKYASKAGIPPVDKGLLMCYNITKPDDLQTK
NSIATSEELAQYITHGDYKLKLDIALPLYSWAVAFRGNQFKGILSDYDQLIKDTSKVKKTSDTQYVLQDDVLVGQTYLRN
GDEIRIEKISDSELDKMISIIKNKIQIDNQTKVTFFSFDKKYINDYGTENISNYYARF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43976; Mature: 43976

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNAFFVLLFVVLSSGNRENDHKVIRSFCYWKTNLYFQEEDDSLVNKLDVKHMYVRFFDV
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHEEEEEEEEEC
DYNPYSKEPLPVATIWDISFNKSNPEITPSIFITNEVVLKSDTKQLDSLAVRMAKRIEQI
CCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECEEEECCCHHHHHHHHHHHHHHHHHH
GKKMNDTKADIIASNIVYPKDYYKQKDYKPLNYDSVRAAESAKLKVAFKEILIDCDWTEK
HHHCCCCHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHCCCCHHEEEEHHHEEECCCCCC
SQKNYFYLLKQIKSQLPSSKIAATIRLWQYKYASKAGIPPVDKGLLMCYNITKPDDLQTK
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCC
NSIATSEELAQYITHGDYKLKLDIALPLYSWAVAFRGNQFKGILSDYDQLIKDTSKVKKT
CCCCCHHHHHHHHHCCCEEEEEEEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
SDTQYVLQDDVLVGQTYLRNGDEIRIEKISDSELDKMISIIKNKIQIDNQTKVTFFSFDK
CCCEEEEECCEEECHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHEECCCCEEEEEECCH
KYINDYGTENISNYYARF
HHHHHCCCCCHHHHHHCC
>Mature Secondary Structure
MKNAFFVLLFVVLSSGNRENDHKVIRSFCYWKTNLYFQEEDDSLVNKLDVKHMYVRFFDV
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHEEEEEEEEEC
DYNPYSKEPLPVATIWDISFNKSNPEITPSIFITNEVVLKSDTKQLDSLAVRMAKRIEQI
CCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECEEEECCCHHHHHHHHHHHHHHHHHH
GKKMNDTKADIIASNIVYPKDYYKQKDYKPLNYDSVRAAESAKLKVAFKEILIDCDWTEK
HHHCCCCHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHCCCCHHEEEEHHHEEECCCCCC
SQKNYFYLLKQIKSQLPSSKIAATIRLWQYKYASKAGIPPVDKGLLMCYNITKPDDLQTK
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCC
NSIATSEELAQYITHGDYKLKLDIALPLYSWAVAFRGNQFKGILSDYDQLIKDTSKVKKT
CCCCCHHHHHHHHHCCCEEEEEEEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
SDTQYVLQDDVLVGQTYLRNGDEIRIEKISDSELDKMISIIKNKIQIDNQTKVTFFSFDK
CCCEEEEECCEEECHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHEECCCCEEEEEECCH
KYINDYGTENISNYYARF
HHHHHCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA