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The map label for this gene is chbR [C]

Identifier: 146301116

GI number: 146301116

Start: 4032264

End: 4033133

Strand: Reverse

Name: chbR [C]

Synonym: Fjoh_3374

Alternate gene names: 146301116

Gene position: 4033133-4032264 (Counterclockwise)

Preceding gene: 146301120

Following gene: 146301115

Centisome position: 66.15

GC content: 33.45

Gene sequence:

>870_bases
ATGAATAACCAAACAGAAACTCAGAGTTGCGATTTTTCTTCAGATTTAAAAATGAAGGGATTTAAAGTATATCCTATAAA
TGGGGATTTTAGTAAAGTTCCCGTTTACAGCCGAAGAGACTTTTATAAAATCTGCATCAACACCAGTAAAAGTATCATAC
AATATGCCGACCGTGGAATAGAAACCGACGGGACGATTCTTTTTTTTGGTAATCCTATAATTCCTTATTCATGGGAAACT
GTTTCAGAGAATTACGAAGGTTATGCATGTGTTTTTACGGAAGAATTTTTGAAAGCAAAAGACCGATCAGAAACGCTTCA
CGAATCGCCTTTGTTTAAAATAGGAGGAACGCCAATTTTTTCTTTAAATGCTGAACAAAAGCTGTTTGTAGATTCTTTGT
TTCAAAAAATGATCAAAGAATATGAAACCGATTATGTTTTTAAAGACGATTTAATGCGCAGTTATGTCAACCTGATTATT
CATGAATCAATGAAAATGCAGCCTTCTGAAAATTTCTTTAAACATAAAAATGCTTCTTCAAGAATTACTTCTTTGTTTTT
GGAATTATTAGAAAGACAATTTCCTATAGAAACCAAAAACGAACCTTTGGCTTTAAAAACGCCTCAGGATTATGCGCAAA
GTCTTGCTGTGCATGTAAATCATTTAAATCGTTCAGTAAAAGAAGTTACGGGAAAACCAACAACGGCGCATATTACAGAG
CGAATTATAAACGAAGCAAAAGCATTGTTGCAGCATACAGACTGGAGTATTTCGGATATAGGATATTCGCTTGGGTTTGA
ATATCCAAGTTATTTTAATAATTACTTTAAAAGACTTACCGGAACTGTTCCAAAATCGCTTCGAATGTAA

Upstream 100 bases:

>100_bases
TTTGCGAGATTATTTCGCCCAGCAAAAATAAATTTAGCCAAACCTTAGTGCGTTTTGTAATTGAAATAAAAATATTGTTT
GATTTTCATAACTTTGCAGA

Downstream 100 bases:

>100_bases
AATTGTTTCAAATTCATAATTTTTTGTTTGAATATTGTTATTTCATGAAAGCATTCGCGTAGTACTTTTGCCTTGAAATT
CAGTATTAATCATTTATCAG

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: AraC Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator; Transcriptional Regulator Arac Family; AraC-Family Regulatory Protein; Transcriptional Regulator PobR; Transcriptional Regulator AraC Type; Transcriptional Regulatory Protein; Regulatory Protein; AraC-Type Transcription Regulator; Bacterial Regulatory Helix-Turn-Helix Protein; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcriptional Regulator AraC Family Protein; Helix-Turn-Helix AraC Type; Transcriptional Regulator Protein

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MNNQTETQSCDFSSDLKMKGFKVYPINGDFSKVPVYSRRDFYKICINTSKSIIQYADRGIETDGTILFFGNPIIPYSWET
VSENYEGYACVFTEEFLKAKDRSETLHESPLFKIGGTPIFSLNAEQKLFVDSLFQKMIKEYETDYVFKDDLMRSYVNLII
HESMKMQPSENFFKHKNASSRITSLFLELLERQFPIETKNEPLALKTPQDYAQSLAVHVNHLNRSVKEVTGKPTTAHITE
RIINEAKALLQHTDWSISDIGYSLGFEYPSYFNNYFKRLTGTVPKSLRM

Sequences:

>Translated_289_residues
MNNQTETQSCDFSSDLKMKGFKVYPINGDFSKVPVYSRRDFYKICINTSKSIIQYADRGIETDGTILFFGNPIIPYSWET
VSENYEGYACVFTEEFLKAKDRSETLHESPLFKIGGTPIFSLNAEQKLFVDSLFQKMIKEYETDYVFKDDLMRSYVNLII
HESMKMQPSENFFKHKNASSRITSLFLELLERQFPIETKNEPLALKTPQDYAQSLAVHVNHLNRSVKEVTGKPTTAHITE
RIINEAKALLQHTDWSISDIGYSLGFEYPSYFNNYFKRLTGTVPKSLRM
>Mature_289_residues
MNNQTETQSCDFSSDLKMKGFKVYPINGDFSKVPVYSRRDFYKICINTSKSIIQYADRGIETDGTILFFGNPIIPYSWET
VSENYEGYACVFTEEFLKAKDRSETLHESPLFKIGGTPIFSLNAEQKLFVDSLFQKMIKEYETDYVFKDDLMRSYVNLII
HESMKMQPSENFFKHKNASSRITSLFLELLERQFPIETKNEPLALKTPQDYAQSLAVHVNHLNRSVKEVTGKPTTAHITE
RIINEAKALLQHTDWSISDIGYSLGFEYPSYFNNYFKRLTGTVPKSLRM

Specific function: Repressor For The Chbbcarfg Operon (Probable). [C]

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33477; Mature: 33477

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNQTETQSCDFSSDLKMKGFKVYPINGDFSKVPVYSRRDFYKICINTSKSIIQYADRGI
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCC
ETDGTILFFGNPIIPYSWETVSENYEGYACVFTEEFLKAKDRSETLHESPLFKIGGTPIF
CCCCEEEEECCCCCCCCCHHHCCCCCCEEEEEEHHHHHHCCHHHHHHCCCCEEECCCEEE
SLNAEQKLFVDSLFQKMIKEYETDYVFKDDLMRSYVNLIIHESMKMQPSENFFKHKNASS
ECCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHH
RITSLFLELLERQFPIETKNEPLALKTPQDYAQSLAVHVNHLNRSVKEVTGKPTTAHITE
HHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
RIINEAKALLQHTDWSISDIGYSLGFEYPSYFNNYFKRLTGTVPKSLRM
HHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHCC
>Mature Secondary Structure
MNNQTETQSCDFSSDLKMKGFKVYPINGDFSKVPVYSRRDFYKICINTSKSIIQYADRGI
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCC
ETDGTILFFGNPIIPYSWETVSENYEGYACVFTEEFLKAKDRSETLHESPLFKIGGTPIF
CCCCEEEEECCCCCCCCCHHHCCCCCCEEEEEEHHHHHHCCHHHHHHCCCCEEECCCEEE
SLNAEQKLFVDSLFQKMIKEYETDYVFKDDLMRSYVNLIIHESMKMQPSENFFKHKNASS
ECCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHH
RITSLFLELLERQFPIETKNEPLALKTPQDYAQSLAVHVNHLNRSVKEVTGKPTTAHITE
HHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
RIINEAKALLQHTDWSISDIGYSLGFEYPSYFNNYFKRLTGTVPKSLRM
HHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA