| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301104
Identifier: 146301104
GI number: 146301104
Start: 4023424
End: 4023924
Strand: Direct
Name: 146301104
Synonym: Fjoh_3362
Alternate gene names: NA
Gene position: 4023424-4023924 (Clockwise)
Preceding gene: 146301102
Following gene: 146301108
Centisome position: 65.99
GC content: 39.32
Gene sequence:
>501_bases ATGGGAGATCATAAAGACCTTACTGAAGAATTTGCTGTCAATAAAATCAAAGATTTGGCAGAAAACATAAAAACCTGCAT GTTTTGTACTTACAACAGCGACAGACTGCAATCAAGACCAATGTCGGTTCAAAAAATTGATGATTTAGGACGTCTTTGGT TTTTATCTGATCGCAACAGCAGCCAGAATGCAGAGATTACTTTAAATCCGCAGGTTGAGATATTTTTTTCTGAACCACAC GATAAATTCCTTACACTGCACGGAACCGCAACGATTTCGTACGACAGAGAAACCATCAAAGAATTATACGATCCTATTGT AAAAGTCTGGATGCCAGGCGGAGAAGACGATCCAAATTTAAGTGTTATCACAGTTACACCCGAAGACGGTTATTACTGGA ACAACAAACACGGTAAAATGGTTGCCATAGCAAAAATGGCCACTGCCCTTGTAACTGGTAAAACAATGGATGACGGGATT GAAGGAACTTTGAAACTGTAG
Upstream 100 bases:
>100_bases ATATAATTCTATAATTGAGTCGGTTATAAAAATCTCAACTTTGTTTTATGTGTTTCCATAAACACAATTAAAATTATAAA AACTTTAAAACAATAAAGCC
Downstream 100 bases:
>100_bases TTTTTTTTATTCTTTAACCGCAAAGAGCACAAAGGTTTACATAAAAGGTCACAAAGAGAATTAATCTTTGCGAACCTTAC GTAAACCTTTGCGCTCTTTG
Product: pyridoxamine 5'-phosphate oxidase-like protein
Products: NA
Alternate protein names: Stress Protein; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxamine 5-Phosphate Oxidase-Related Protein; General Stress
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MGDHKDLTEEFAVNKIKDLAENIKTCMFCTYNSDRLQSRPMSVQKIDDLGRLWFLSDRNSSQNAEITLNPQVEIFFSEPH DKFLTLHGTATISYDRETIKELYDPIVKVWMPGGEDDPNLSVITVTPEDGYYWNNKHGKMVAIAKMATALVTGKTMDDGI EGTLKL
Sequences:
>Translated_166_residues MGDHKDLTEEFAVNKIKDLAENIKTCMFCTYNSDRLQSRPMSVQKIDDLGRLWFLSDRNSSQNAEITLNPQVEIFFSEPH DKFLTLHGTATISYDRETIKELYDPIVKVWMPGGEDDPNLSVITVTPEDGYYWNNKHGKMVAIAKMATALVTGKTMDDGI EGTLKL >Mature_165_residues GDHKDLTEEFAVNKIKDLAENIKTCMFCTYNSDRLQSRPMSVQKIDDLGRLWFLSDRNSSQNAEITLNPQVEIFFSEPHD KFLTLHGTATISYDRETIKELYDPIVKVWMPGGEDDPNLSVITVTPEDGYYWNNKHGKMVAIAKMATALVTGKTMDDGIE GTLKL
Specific function: Unknown
COG id: COG3871
COG function: function code R; Uncharacterized stress protein (general stress protein 26)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18822; Mature: 18690
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDHKDLTEEFAVNKIKDLAENIKTCMFCTYNSDRLQSRPMSVQKIDDLGRLWFLSDRNS CCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHCCCCCHHHHHCCCEEEEEECCCC SQNAEITLNPQVEIFFSEPHDKFLTLHGTATISYDRETIKELYDPIVKVWMPGGEDDPNL CCCCEEEECCEEEEEEECCCCCEEEEEEEEEEEECHHHHHHHHHHHHEEECCCCCCCCCE SVITVTPEDGYYWNNKHGKMVAIAKMATALVTGKTMDDGIEGTLKL EEEEEECCCCEEEECCCCCEEEHHHHHHHHHCCCCCCCCCCEEEEC >Mature Secondary Structure GDHKDLTEEFAVNKIKDLAENIKTCMFCTYNSDRLQSRPMSVQKIDDLGRLWFLSDRNS CCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHCCCCCHHHHHCCCEEEEEECCCC SQNAEITLNPQVEIFFSEPHDKFLTLHGTATISYDRETIKELYDPIVKVWMPGGEDDPNL CCCCEEEECCEEEEEEECCCCCEEEEEEEEEEEECHHHHHHHHHHHHEEECCCCCCCCCE SVITVTPEDGYYWNNKHGKMVAIAKMATALVTGKTMDDGIEGTLKL EEEEEECCCCEEEECCCCCEEEHHHHHHHHHCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA