| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301078
Identifier: 146301078
GI number: 146301078
Start: 3985000
End: 3985638
Strand: Direct
Name: 146301078
Synonym: Fjoh_3334
Alternate gene names: NA
Gene position: 3985000-3985638 (Clockwise)
Preceding gene: 146301077
Following gene: 146301079
Centisome position: 65.36
GC content: 29.73
Gene sequence:
>639_bases ATGAAAAAAATATTTATAGCCGGCGTTGTCTTTGTATTCATTTTATATGCTTTCAAAAAATTAGTTTATGATTCTTATCA ATGGAAAAAAGCAATTAACAGCCCTGAGCATAAACTGCAACTAGGAAGTTTTATCTTTAGTAAACAAAGCGGCTCTAACG GGAGTCAAAGCATGGAACACAAATACTTTATTTTTAAGGTAATTGAAATAAACGGCGATTATGTGAAACTTTCGGTTGTT AGACAGTTATCGCAAAAAAATAAGCTGCTCCAATCTGATTTTTCGACTACCAAAGAAGCTTATAAAGATTTAAAACAAAA CATAGGAAATATAAAAATTACAGGAATTCTAAAAGAGGATTTGTATAAAGCCGGTCCTTCTTATACTTTGAATAATTTTT TATTAGAAAAATATCCTTCATTACTGCAGTCCAGATATTATTTTGAAGAAATCCCTGAGAATAAAAAAAATCTTCCAATA CCAGTTGATTACAACGAATTACAGGAATATTTCAGTTTAGTTTATTCTAAAGATGAAATTATAAACAAGGGAAAACTGGT TCCATGGGTTTTAAACAACAACACTACACCTGAATTAGCCGAGAGGTTGTCTCAAAATATAGATTTGATACTTAATTAA
Upstream 100 bases:
>100_bases TAAATAAAGCTTTGCGAGCTTTGCGTTTTTTATAAGGATACTAAGTGAAAAAACTTTGCTTGCGGTTAAAAAGTAGTACT TTTAATGAAATTTCCATTTA
Downstream 100 bases:
>100_bases CCGCAAAATTATTTAAACGAAAAGAATACAATCCCGATAGCCATCGGGAACACAAAGTTCGCAAAGTTTTTAGGTAAAGC TTTGCGAACTTGGCGTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MKKIFIAGVVFVFILYAFKKLVYDSYQWKKAINSPEHKLQLGSFIFSKQSGSNGSQSMEHKYFIFKVIEINGDYVKLSVV RQLSQKNKLLQSDFSTTKEAYKDLKQNIGNIKITGILKEDLYKAGPSYTLNNFLLEKYPSLLQSRYYFEEIPENKKNLPI PVDYNELQEYFSLVYSKDEIINKGKLVPWVLNNNTTPELAERLSQNIDLILN
Sequences:
>Translated_212_residues MKKIFIAGVVFVFILYAFKKLVYDSYQWKKAINSPEHKLQLGSFIFSKQSGSNGSQSMEHKYFIFKVIEINGDYVKLSVV RQLSQKNKLLQSDFSTTKEAYKDLKQNIGNIKITGILKEDLYKAGPSYTLNNFLLEKYPSLLQSRYYFEEIPENKKNLPI PVDYNELQEYFSLVYSKDEIINKGKLVPWVLNNNTTPELAERLSQNIDLILN >Mature_212_residues MKKIFIAGVVFVFILYAFKKLVYDSYQWKKAINSPEHKLQLGSFIFSKQSGSNGSQSMEHKYFIFKVIEINGDYVKLSVV RQLSQKNKLLQSDFSTTKEAYKDLKQNIGNIKITGILKEDLYKAGPSYTLNNFLLEKYPSLLQSRYYFEEIPENKKNLPI PVDYNELQEYFSLVYSKDEIINKGKLVPWVLNNNTTPELAERLSQNIDLILN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24675; Mature: 24675
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIFIAGVVFVFILYAFKKLVYDSYQWKKAINSPEHKLQLGSFIFSKQSGSNGSQSMEH CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHC KYFIFKVIEINGDYVKLSVVRQLSQKNKLLQSDFSTTKEAYKDLKQNIGNIKITGILKED EEEEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHH LYKAGPSYTLNNFLLEKYPSLLQSRYYFEEIPENKKNLPIPVDYNELQEYFSLVYSKDEI HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH INKGKLVPWVLNNNTTPELAERLSQNIDLILN HCCCCEEEEEECCCCCHHHHHHHHCCCCEEEC >Mature Secondary Structure MKKIFIAGVVFVFILYAFKKLVYDSYQWKKAINSPEHKLQLGSFIFSKQSGSNGSQSMEH CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHC KYFIFKVIEINGDYVKLSVVRQLSQKNKLLQSDFSTTKEAYKDLKQNIGNIKITGILKED EEEEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHH LYKAGPSYTLNNFLLEKYPSLLQSRYYFEEIPENKKNLPIPVDYNELQEYFSLVYSKDEI HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH INKGKLVPWVLNNNTTPELAERLSQNIDLILN HCCCCEEEEEECCCCCHHHHHHHHCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA