| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301062
Identifier: 146301062
GI number: 146301062
Start: 3963612
End: 3964019
Strand: Direct
Name: 146301062
Synonym: Fjoh_3318
Alternate gene names: NA
Gene position: 3963612-3964019 (Clockwise)
Preceding gene: 146301061
Following gene: 146301063
Centisome position: 65.01
GC content: 28.92
Gene sequence:
>408_bases ATGGAAAAATCTAAAGTTATGCAGCACGAAAAATTTGGAGAAAAAGATTTTCAAACTATTATTGGAAACTTATTGCGTTA TGGCGTCTGGATTTCATTATCAGTTGCTTTCATTGGCGGAATCGTATATTTAATGCACCACGGAAGCGAAATCGAAGATT ATTCGGTTTTTAAGGAAAATGATCGAAATATTTTTGAAGTAATTTCAACAGTTGTCAATGGTGCAATTGATGGTCGAGGT GAATTTTTAATTTTCTTTGGAATCATATTATTGTTTTTAACACCTGTATTTAGGGTTTTACTTTCATTGTTTTCATTTAT GCTTGAAAAAGATTATCTGTATGTTGTAATTACATTAATTGTAATCCTGATTATTATTACAAGTATTTCATTTGGTTTTT CACATTAA
Upstream 100 bases:
>100_bases GGAGCTAAAGTTTTGGTGAAAACCAACCCAAAAAAATTAAGAATATTTTTTGCATGCCTGATTTTCGTACTGGCAGTTAA TATGATCTACAACGGAATTA
Downstream 100 bases:
>100_bases AAATAGCCGTAAGCTTTAAGGCATAAAAAACAGCTTAAAGCTTATAGCTTACCTAAAGCAAAAAATAGTATGGAAATAGG AATAGACAGCTTTGCTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MEKSKVMQHEKFGEKDFQTIIGNLLRYGVWISLSVAFIGGIVYLMHHGSEIEDYSVFKENDRNIFEVISTVVNGAIDGRG EFLIFFGIILLFLTPVFRVLLSLFSFMLEKDYLYVVITLIVILIIITSISFGFSH
Sequences:
>Translated_135_residues MEKSKVMQHEKFGEKDFQTIIGNLLRYGVWISLSVAFIGGIVYLMHHGSEIEDYSVFKENDRNIFEVISTVVNGAIDGRG EFLIFFGIILLFLTPVFRVLLSLFSFMLEKDYLYVVITLIVILIIITSISFGFSH >Mature_135_residues MEKSKVMQHEKFGEKDFQTIIGNLLRYGVWISLSVAFIGGIVYLMHHGSEIEDYSVFKENDRNIFEVISTVVNGAIDGRG EFLIFFGIILLFLTPVFRVLLSLFSFMLEKDYLYVVITLIVILIIITSISFGFSH
Specific function: Unknown
COG id: COG4272
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15465; Mature: 15465
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKSKVMQHEKFGEKDFQTIIGNLLRYGVWISLSVAFIGGIVYLMHHGSEIEDYSVFKEN CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC DRNIFEVISTVVNGAIDGRGEFLIFFGIILLFLTPVFRVLLSLFSFMLEKDYLYVVITLI CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH VILIIITSISFGFSH HHHHHHHHHHHCCCC >Mature Secondary Structure MEKSKVMQHEKFGEKDFQTIIGNLLRYGVWISLSVAFIGGIVYLMHHGSEIEDYSVFKEN CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC DRNIFEVISTVVNGAIDGRGEFLIFFGIILLFLTPVFRVLLSLFSFMLEKDYLYVVITLI CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH VILIIITSISFGFSH HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA