| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301028
Identifier: 146301028
GI number: 146301028
Start: 3925903
End: 3927384
Strand: Reverse
Name: 146301028
Synonym: Fjoh_3284
Alternate gene names: NA
Gene position: 3927384-3925903 (Counterclockwise)
Preceding gene: 146301037
Following gene: 146301027
Centisome position: 64.42
GC content: 38.06
Gene sequence:
>1482_bases ATGAAAAAATTATCAGTTTATATTTGTTTGATTTTTTTGGCTTTGATCAGCTGTAAAAAAGAAACAGAAGTTACAAAAAG TACCGACAGTTCTGTAGATTTAACTTCGGATTATGAATTTACAGGCGGTTATCCAACCGAAGCGACTATTAAAAAAGCTT ACGATGATGCCGATTTAACTCGAGCAATACAGGCTTATAAATTTTTCTATCCAACGGTTTCCGGTGAAGGTCTGGTAAAA GGGAATGACAGCATTAAAATTATTCCTAACAAATCATTTGGAACTTTAGACACCAAACCAGGACAAATTGGTTTTACTCT TAATTCAGATACGCCTTACGGACCAATTCCTATTGATTTATCAGACGGTCCAATGGTTATAGATATCCCAAAAGGACCTC TTATTGTTGTAGCAATGGATGTCAATCAACGCTGGGTAGCCGATATGGGAATTCCGGGACCTGATGCTGGCAATGGAGGA AAACATCTGCTATTGCCTCCTGATTATAAGGGTGTCGTTCCTGCTTCGGGATATCATGTCTGGAAATCTTCATCAAATAA TTTAACTGTAGGCATACGCTCGCTTCCTGTTGGCGGTGATGTAAATGCGGCTATAACACGTATTAAAACGGTTAAAGTAT ATCCGTTAAATAAACCGGCAAACTGGAAAGAGCCAGACTGGCTTGATCTTACTAATAAACCTCAAAACACAACACCATTA GGATGGGAAAATAACATAAAATACTGGGAAAATTTAAATGATGTTATTCAGCGTGAACCAGTTTTTGAAGGATATAGAAA CTATTATGGAGAATTGGCGGTATTAGGAATTAAAAAAGGAAAATCATTCAGTCCTGATGCACGTATGAAAGCAATACTCG AAAAAGCCGCTAAAATTGCTAATGCACAAATGCGTGTACAATCTTTTGCTGATCGTCGTGAAGACCGTGTAGTTTGGAAA GACCGCCAATGGGAATGGGTGGCACTTCGATTTGAAGACGGCGATTTTAATACTCCTGATTATGTAGATCTTGATGGCAG GGAAACCTGGTTTTATCAGGCAATTGGTGCTTCGCCGTCAATGTTTAGAAGAAAAGAAGGCGGAGGATCTTTATACTGGC TTGGACTTAAGGATAATACAGGGAAATATGTAGACGGAAGTAAAACATATAAATTAACAATACCAACACCTGTACCTGCT AAATTATTTTGGTCGGTTACCATTTATGATGCTAAAACGAGAAGTCAGGTTATAACAGATCAAAATAAAGCCGCGCTTCG TTCTTTATTTGAACTAAAAAATAAAATAGGCGGTAAAACGGTTGACTTATATTTTGGACCAAAAGCTCCGGCCGGAAAAG AAGGTCAATGGATTAAAACAATTCCAAATGTGGGCTGGTTTGCTTATTTCCGAATTTACGGACCAGAAAAAGACGCATTT AACGGAAGCTGGAAACCAGGTGACTTTGAAGAAGTAAAGTAA
Upstream 100 bases:
>100_bases ATAATATGAAACCTAATTGAGGCTCTAAAAGTAATTTAAAACTGATAGGTGGTGATAACTTTGATAATGTTTTGAAGTTT AACCATTTAAATAAATTTAC
Downstream 100 bases:
>100_bases CACTTTAAACCATCATACTATCATGAAACAACTATTTAAACTTTTGATATTTTTGTTCTGTTCCTTTTTAATGGCACAGA ATCCTCCTAAAAAACAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 493; Mature: 493
Protein sequence:
>493_residues MKKLSVYICLIFLALISCKKETEVTKSTDSSVDLTSDYEFTGGYPTEATIKKAYDDADLTRAIQAYKFFYPTVSGEGLVK GNDSIKIIPNKSFGTLDTKPGQIGFTLNSDTPYGPIPIDLSDGPMVIDIPKGPLIVVAMDVNQRWVADMGIPGPDAGNGG KHLLLPPDYKGVVPASGYHVWKSSSNNLTVGIRSLPVGGDVNAAITRIKTVKVYPLNKPANWKEPDWLDLTNKPQNTTPL GWENNIKYWENLNDVIQREPVFEGYRNYYGELAVLGIKKGKSFSPDARMKAILEKAAKIANAQMRVQSFADRREDRVVWK DRQWEWVALRFEDGDFNTPDYVDLDGRETWFYQAIGASPSMFRRKEGGGSLYWLGLKDNTGKYVDGSKTYKLTIPTPVPA KLFWSVTIYDAKTRSQVITDQNKAALRSLFELKNKIGGKTVDLYFGPKAPAGKEGQWIKTIPNVGWFAYFRIYGPEKDAF NGSWKPGDFEEVK
Sequences:
>Translated_493_residues MKKLSVYICLIFLALISCKKETEVTKSTDSSVDLTSDYEFTGGYPTEATIKKAYDDADLTRAIQAYKFFYPTVSGEGLVK GNDSIKIIPNKSFGTLDTKPGQIGFTLNSDTPYGPIPIDLSDGPMVIDIPKGPLIVVAMDVNQRWVADMGIPGPDAGNGG KHLLLPPDYKGVVPASGYHVWKSSSNNLTVGIRSLPVGGDVNAAITRIKTVKVYPLNKPANWKEPDWLDLTNKPQNTTPL GWENNIKYWENLNDVIQREPVFEGYRNYYGELAVLGIKKGKSFSPDARMKAILEKAAKIANAQMRVQSFADRREDRVVWK DRQWEWVALRFEDGDFNTPDYVDLDGRETWFYQAIGASPSMFRRKEGGGSLYWLGLKDNTGKYVDGSKTYKLTIPTPVPA KLFWSVTIYDAKTRSQVITDQNKAALRSLFELKNKIGGKTVDLYFGPKAPAGKEGQWIKTIPNVGWFAYFRIYGPEKDAF NGSWKPGDFEEVK >Mature_493_residues MKKLSVYICLIFLALISCKKETEVTKSTDSSVDLTSDYEFTGGYPTEATIKKAYDDADLTRAIQAYKFFYPTVSGEGLVK GNDSIKIIPNKSFGTLDTKPGQIGFTLNSDTPYGPIPIDLSDGPMVIDIPKGPLIVVAMDVNQRWVADMGIPGPDAGNGG KHLLLPPDYKGVVPASGYHVWKSSSNNLTVGIRSLPVGGDVNAAITRIKTVKVYPLNKPANWKEPDWLDLTNKPQNTTPL GWENNIKYWENLNDVIQREPVFEGYRNYYGELAVLGIKKGKSFSPDARMKAILEKAAKIANAQMRVQSFADRREDRVVWK DRQWEWVALRFEDGDFNTPDYVDLDGRETWFYQAIGASPSMFRRKEGGGSLYWLGLKDNTGKYVDGSKTYKLTIPTPVPA KLFWSVTIYDAKTRSQVITDQNKAALRSLFELKNKIGGKTVDLYFGPKAPAGKEGQWIKTIPNVGWFAYFRIYGPEKDAF NGSWKPGDFEEVK
Specific function: Unknown
COG id: COG5361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55144; Mature: 55144
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00283 SOYBEAN_KUNITZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLSVYICLIFLALISCKKETEVTKSTDSSVDLTSDYEFTGGYPTEATIKKAYDDADLT CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEECCCCCCHHHHHHHCCHHHHH RAIQAYKFFYPTVSGEGLVKGNDSIKIIPNKSFGTLDTKPGQIGFTLNSDTPYGPIPIDL HHHHHHHEEECCCCCCEEEECCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEEE SDGPMVIDIPKGPLIVVAMDVNQRWVADMGIPGPDAGNGGKHLLLPPDYKGVVPASGYHV CCCCEEEECCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCEEE WKSSSNNLTVGIRSLPVGGDVNAAITRIKTVKVYPLNKPANWKEPDWLDLTNKPQNTTPL EECCCCCEEEEEEECCCCCCCHHEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC GWENNIKYWENLNDVIQREPVFEGYRNYYGELAVLGIKKGKSFSPDARMKAILEKAAKIA CCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH NAQMRVQSFADRREDRVVWKDRQWEWVALRFEDGDFNTPDYVDLDGRETWFYQAIGASPS HHHHHHHHHHHCCCCCEEEECCCEEEEEEEEECCCCCCCCEEECCCCCEEEEEEECCCHH MFRRKEGGGSLYWLGLKDNTGKYVDGSKTYKLTIPTPVPAKLFWSVTIYDAKTRSQVITD HHHCCCCCCEEEEEEEECCCCCEECCCEEEEEEECCCCCCEEEEEEEEEECCCCCHHCCC QNKAALRSLFELKNKIGGKTVDLYFGPKAPAGKEGQWIKTIPNVGWFAYFRIYGPEKDAF CHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCC NGSWKPGDFEEVK CCCCCCCCHHCCC >Mature Secondary Structure MKKLSVYICLIFLALISCKKETEVTKSTDSSVDLTSDYEFTGGYPTEATIKKAYDDADLT CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEECCCCCCHHHHHHHCCHHHHH RAIQAYKFFYPTVSGEGLVKGNDSIKIIPNKSFGTLDTKPGQIGFTLNSDTPYGPIPIDL HHHHHHHEEECCCCCCEEEECCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEEE SDGPMVIDIPKGPLIVVAMDVNQRWVADMGIPGPDAGNGGKHLLLPPDYKGVVPASGYHV CCCCEEEECCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCEEE WKSSSNNLTVGIRSLPVGGDVNAAITRIKTVKVYPLNKPANWKEPDWLDLTNKPQNTTPL EECCCCCEEEEEEECCCCCCCHHEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC GWENNIKYWENLNDVIQREPVFEGYRNYYGELAVLGIKKGKSFSPDARMKAILEKAAKIA CCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH NAQMRVQSFADRREDRVVWKDRQWEWVALRFEDGDFNTPDYVDLDGRETWFYQAIGASPS HHHHHHHHHHHCCCCCEEEECCCEEEEEEEEECCCCCCCCEEECCCCCEEEEEEECCCHH MFRRKEGGGSLYWLGLKDNTGKYVDGSKTYKLTIPTPVPAKLFWSVTIYDAKTRSQVITD HHHCCCCCCEEEEEEEECCCCCEECCCEEEEEEECCCCCCEEEEEEEEEECCCCCHHCCC QNKAALRSLFELKNKIGGKTVDLYFGPKAPAGKEGQWIKTIPNVGWFAYFRIYGPEKDAF CHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCC NGSWKPGDFEEVK CCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA