| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is atsA [H]
Identifier: 146301027
GI number: 146301027
Start: 3923481
End: 3925880
Strand: Reverse
Name: atsA [H]
Synonym: Fjoh_3283
Alternate gene names: 146301027
Gene position: 3925880-3923481 (Counterclockwise)
Preceding gene: 146301028
Following gene: 146301026
Centisome position: 64.39
GC content: 38.21
Gene sequence:
>2400_bases ATGAAACAACTATTTAAACTTTTGATATTTTTGTTCTGTTCCTTTTTAATGGCACAGAATCCTCCTAAAAAACAGGAAGA AAAGAAATTTGGCGGTGATATTAAACTCGATATTCGGGATTCAAAAGGCGACTGGCCGGCATTTCTGGAGACAAAAGCTC CAAAAGATGCCCCAAACGTACTTATTATTTTATATGATGATACCGGTTTTGCTGCATGGTCACCTTATGGGGGGCGTATC AATATGCCCACTATGGATGAACTGGCAAAAAACGGATTAACGTATACGCAATGGCATACTACATCGGTATGTTCGCCTAC ACGTTCTACACTTTTAACAGGGCGTAATCATCATCAAAACGGATTTGGTTCTATATCAGAATCTGCGGTTGGATTTCCGG GCTACAGCGGGCATATCCCAAAAGAAAATGCTACACTTGCTACTGTATTGCGAGAAGCCGGATGGTCGACTTTTTGGATT GGTAAAAACCATAATGTTCCTGTAGATGCACTTGATATGGCTTCTTCTAAAGAACGCTGGCCTCTTGGACTTGGATTTGA TCGTTTTTACGGATTTATTGGAGGAGAAACTAACCAGTGGTACCCAAGTCTTATAGAAGACAATCATTTTATAGAACAGC CTTCTCAACCAGAAAATGGTTATCATTTAAGCAAAGATTTGGCAGATAAAGCAATTGCGTATATTCAGGATTCAAAACAA TCAAAACCAGATAAGCCTTGGTTTATGTGGTACAATCCGGGAGCAAATCATGCACCGCATCATGCACCAGCCGATTATAT TGCGAAATACAAAGGAAAATTTGACGATGGTTATGAAGCTTACAGAGACTGGGTTTTAAAACGTATGATCGATAAAGGAA TTCTGCCAAAAGGAACAAAAATGACACCTTTAAATCCTATGCCGAAAGGTAAATTTGCTGAAAGCGATATGGTAAAACCA TGGAATAGTCTGACTGCCGATGAAAAAAAATTGTTCAGCCGTATGGCCGAAGTGTATGCGGCTTATTCAGAATTTACAGA TGCTGAAGTAGGGCGTGTAATTAAATATCTAAAAGATTCAGGTCAGTTTGATAATACTTTGATTATGTATTGTGCTGATA ATGGTGCTTCTGCAGAAGGTTCGCCAAATGGTTCGGTAAACGAGAATAATTTCTTTAATGCCTATCCGGATGACATGAGT GTTAATTTAAGCATGATTGATAAACTAGGTTCAGAAGATACTTACAATCATTATCCAACAGGATGGGCAGCTGCTTTTTC GACACCATTTAAAATGTTTAAAAGATATTCTGGCTACAGCGGAGGGACTGCTGATCCTCTTGTAATCTGCTGGCCAAAAG GAATTAAAGCCAAAGGTGAATTAAGAAGTCAGTATTACCACTGTACCGATATTGTACCTACAATATTAGAAGCCTGCGGT TTGACGATGCCGGATGTAGTAGATGGTGTCAAGCAGACACCCCTTGCAGGTGTTTCTATGATAAGCAGTTTTAATAATGC AAAAGCGCCAACTGCTAAAAAAGTACAATATTATGAAATGGTAGGCACAAGAGGAATCTGGAAAGACGGCTGGAAAGCTA CAGCTGTTCATGGGGCTTTACCCGTAAATATTGGAAATTTTGATAAAGATCAATGGGAGTTGTATAATGTAGATGCTGAT CGTTCAGAGTCTACAGATCTTGCAGTAAAATATCCTGATAAAGTAAAAGAACTGCAACAAATTTGGATGGACGAAGCAAA AAAATACCATGTACTGCCGCTTAATGATCTTTCTATTCCTGAATTTCACAAATTAGAATATCATAAAGAAGTTCCGGCTG ATGGTCGATTTATTTATTATCCGGGAACCACAGAAGTTCCTGAAGCTTCTGCCGCACCAACTCTTGGACGTTCATTTAAA ATTCTGGCCGAAGTAGATTTTACTAAAGATTCAAAAGGAGTTATTGTATCTCAGGGATCACGTTTTGGCGGTTATAGTTT GTTTGCAAAAGACGGAAAACTGACTTATGTCTATAATTTCCTCGGTCTTGCGCCAGAACAGGTTTTAAGCACTTCAATTC CTTCTAGTGGGAAACATATTGTAGGTGTTGAATTTATAAAAGAAAAAATGAGTGACAAAAACGAGACTTTAGGAAAGATG AGGTTGTATTTAGACAATAAAGTAGTTGACGAAAAACCTTTTCGAACTCAGGCAGGACATTATTCACTTTCAGGAGAAGG TTTATGTGTAGGCCGTGACAGCGGTGATCCGGTAAGTAAACAATATAAAGCCAAATTCGATTTTACTGGCGGTAAAATTG CAAAAGTAGTTTATGATGTTAGTAATGATGCTTATCAGAATGTTGAGAACGAATTTAAAGTAAAAATGGCAAAAGAGTAA
Upstream 100 bases:
>100_bases TATTTCCGAATTTACGGACCAGAAAAAGACGCATTTAACGGAAGCTGGAAACCAGGTGACTTTGAAGAAGTAAAGTAACA CTTTAAACCATCATACTATC
Downstream 100 bases:
>100_bases AATGTGATTTCATTAGAGAAATATTTAAACTTCAAGACTATGTCCTTACCTGACGAACTATATAATGTCAAATTTGCAGA ATATTTTGAATCAATGAGAA
Product: sulfatase
Products: NA
Alternate protein names: AS; Aryl-sulfate sulphohydrolase [H]
Number of amino acids: Translated: 799; Mature: 799
Protein sequence:
>799_residues MKQLFKLLIFLFCSFLMAQNPPKKQEEKKFGGDIKLDIRDSKGDWPAFLETKAPKDAPNVLIILYDDTGFAAWSPYGGRI NMPTMDELAKNGLTYTQWHTTSVCSPTRSTLLTGRNHHQNGFGSISESAVGFPGYSGHIPKENATLATVLREAGWSTFWI GKNHNVPVDALDMASSKERWPLGLGFDRFYGFIGGETNQWYPSLIEDNHFIEQPSQPENGYHLSKDLADKAIAYIQDSKQ SKPDKPWFMWYNPGANHAPHHAPADYIAKYKGKFDDGYEAYRDWVLKRMIDKGILPKGTKMTPLNPMPKGKFAESDMVKP WNSLTADEKKLFSRMAEVYAAYSEFTDAEVGRVIKYLKDSGQFDNTLIMYCADNGASAEGSPNGSVNENNFFNAYPDDMS VNLSMIDKLGSEDTYNHYPTGWAAAFSTPFKMFKRYSGYSGGTADPLVICWPKGIKAKGELRSQYYHCTDIVPTILEACG LTMPDVVDGVKQTPLAGVSMISSFNNAKAPTAKKVQYYEMVGTRGIWKDGWKATAVHGALPVNIGNFDKDQWELYNVDAD RSESTDLAVKYPDKVKELQQIWMDEAKKYHVLPLNDLSIPEFHKLEYHKEVPADGRFIYYPGTTEVPEASAAPTLGRSFK ILAEVDFTKDSKGVIVSQGSRFGGYSLFAKDGKLTYVYNFLGLAPEQVLSTSIPSSGKHIVGVEFIKEKMSDKNETLGKM RLYLDNKVVDEKPFRTQAGHYSLSGEGLCVGRDSGDPVSKQYKAKFDFTGGKIAKVVYDVSNDAYQNVENEFKVKMAKE
Sequences:
>Translated_799_residues MKQLFKLLIFLFCSFLMAQNPPKKQEEKKFGGDIKLDIRDSKGDWPAFLETKAPKDAPNVLIILYDDTGFAAWSPYGGRI NMPTMDELAKNGLTYTQWHTTSVCSPTRSTLLTGRNHHQNGFGSISESAVGFPGYSGHIPKENATLATVLREAGWSTFWI GKNHNVPVDALDMASSKERWPLGLGFDRFYGFIGGETNQWYPSLIEDNHFIEQPSQPENGYHLSKDLADKAIAYIQDSKQ SKPDKPWFMWYNPGANHAPHHAPADYIAKYKGKFDDGYEAYRDWVLKRMIDKGILPKGTKMTPLNPMPKGKFAESDMVKP WNSLTADEKKLFSRMAEVYAAYSEFTDAEVGRVIKYLKDSGQFDNTLIMYCADNGASAEGSPNGSVNENNFFNAYPDDMS VNLSMIDKLGSEDTYNHYPTGWAAAFSTPFKMFKRYSGYSGGTADPLVICWPKGIKAKGELRSQYYHCTDIVPTILEACG LTMPDVVDGVKQTPLAGVSMISSFNNAKAPTAKKVQYYEMVGTRGIWKDGWKATAVHGALPVNIGNFDKDQWELYNVDAD RSESTDLAVKYPDKVKELQQIWMDEAKKYHVLPLNDLSIPEFHKLEYHKEVPADGRFIYYPGTTEVPEASAAPTLGRSFK ILAEVDFTKDSKGVIVSQGSRFGGYSLFAKDGKLTYVYNFLGLAPEQVLSTSIPSSGKHIVGVEFIKEKMSDKNETLGKM RLYLDNKVVDEKPFRTQAGHYSLSGEGLCVGRDSGDPVSKQYKAKFDFTGGKIAKVVYDVSNDAYQNVENEFKVKMAKE >Mature_799_residues MKQLFKLLIFLFCSFLMAQNPPKKQEEKKFGGDIKLDIRDSKGDWPAFLETKAPKDAPNVLIILYDDTGFAAWSPYGGRI NMPTMDELAKNGLTYTQWHTTSVCSPTRSTLLTGRNHHQNGFGSISESAVGFPGYSGHIPKENATLATVLREAGWSTFWI GKNHNVPVDALDMASSKERWPLGLGFDRFYGFIGGETNQWYPSLIEDNHFIEQPSQPENGYHLSKDLADKAIAYIQDSKQ SKPDKPWFMWYNPGANHAPHHAPADYIAKYKGKFDDGYEAYRDWVLKRMIDKGILPKGTKMTPLNPMPKGKFAESDMVKP WNSLTADEKKLFSRMAEVYAAYSEFTDAEVGRVIKYLKDSGQFDNTLIMYCADNGASAEGSPNGSVNENNFFNAYPDDMS VNLSMIDKLGSEDTYNHYPTGWAAAFSTPFKMFKRYSGYSGGTADPLVICWPKGIKAKGELRSQYYHCTDIVPTILEACG LTMPDVVDGVKQTPLAGVSMISSFNNAKAPTAKKVQYYEMVGTRGIWKDGWKATAVHGALPVNIGNFDKDQWELYNVDAD RSESTDLAVKYPDKVKELQQIWMDEAKKYHVLPLNDLSIPEFHKLEYHKEVPADGRFIYYPGTTEVPEASAAPTLGRSFK ILAEVDFTKDSKGVIVSQGSRFGGYSLFAKDGKLTYVYNFLGLAPEQVLSTSIPSSGKHIVGVEFIKEKMSDKNETLGKM RLYLDNKVVDEKPFRTQAGHYSLSGEGLCVGRDSGDPVSKQYKAKFDFTGGKIAKVVYDVSNDAYQNVENEFKVKMAKE
Specific function: Unknown
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfatase family [H]
Homologues:
Organism=Homo sapiens, GI38569407, Length=225, Percent_Identity=27.5555555555556, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI157266309, Length=342, Percent_Identity=26.9005847953216, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI38569405, Length=225, Percent_Identity=27.5555555555556, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI109389362, Length=237, Percent_Identity=29.1139240506329, Blast_Score=80, Evalue=8e-15, Organism=Homo sapiens, GI59797060, Length=220, Percent_Identity=29.0909090909091, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI71852586, Length=162, Percent_Identity=33.9506172839506, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI71852584, Length=162, Percent_Identity=33.9506172839506, Blast_Score=75, Evalue=3e-13, Organism=Homo sapiens, GI31742482, Length=351, Percent_Identity=25.9259259259259, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI53831991, Length=141, Percent_Identity=34.7517730496454, Blast_Score=74, Evalue=7e-13, Organism=Homo sapiens, GI4503899, Length=252, Percent_Identity=25.7936507936508, Blast_Score=70, Evalue=8e-12, Organism=Escherichia coli, GI1790233, Length=488, Percent_Identity=26.4344262295082, Blast_Score=84, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17559078, Length=221, Percent_Identity=25.7918552036199, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI281366397, Length=236, Percent_Identity=26.6949152542373, Blast_Score=80, Evalue=5e-15, Organism=Drosophila melanogaster, GI281366395, Length=236, Percent_Identity=26.6949152542373, Blast_Score=80, Evalue=5e-15, Organism=Drosophila melanogaster, GI24666163, Length=236, Percent_Identity=26.6949152542373, Blast_Score=80, Evalue=5e-15, Organism=Drosophila melanogaster, GI24666175, Length=243, Percent_Identity=27.9835390946502, Blast_Score=71, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: =3.1.6.1 [H]
Molecular weight: Translated: 89389; Mature: 89389
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS00523 SULFATASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLFKLLIFLFCSFLMAQNPPKKQEEKKFGGDIKLDIRDSKGDWPAFLETKAPKDAPNV CHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEEECCCCCCCEEEECCCCCCCCCE LIILYDDTGFAAWSPYGGRINMPTMDELAKNGLTYTQWHTTSVCSPTRSTLLTGRNHHQN EEEEECCCCCEEECCCCCEECCCCHHHHHHCCCEEEEECCCCCCCCCHHHHCCCCCCCCC GFGSISESAVGFPGYSGHIPKENATLATVLREAGWSTFWIGKNHNVPVDALDMASSKERW CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCHHHHCCCCCCCC PLGLGFDRFYGFIGGETNQWYPSLIEDNHFIEQPSQPENGYHLSKDLADKAIAYIQDSKQ CCCCCHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC SKPDKPWFMWYNPGANHAPHHAPADYIAKYKGKFDDGYEAYRDWVLKRMIDKGILPKGTK CCCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC MTPLNPMPKGKFAESDMVKPWNSLTADEKKLFSRMAEVYAAYSEFTDAEVGRVIKYLKDS CCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCC GQFDNTLIMYCADNGASAEGSPNGSVNENNFFNAYPDDMSVNLSMIDKLGSEDTYNHYPT CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHCCCCCCCCCCCC GWAAAFSTPFKMFKRYSGYSGGTADPLVICWPKGIKAKGELRSQYYHCTDIVPTILEACG CHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHC LTMPDVVDGVKQTPLAGVSMISSFNNAKAPTAKKVQYYEMVGTRGIWKDGWKATAVHGAL CCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHEEHHHHHCCCCCCCCCCEEEEECCEE PVNIGNFDKDQWELYNVDADRSESTDLAVKYPDKVKELQQIWMDEAKKYHVLPLNDLSIP EEECCCCCCCCEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCC EFHKLEYHKEVPADGRFIYYPGTTEVPEASAAPTLGRSFKILAEVDFTKDSKGVIVSQGS CHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCC RFGGYSLFAKDGKLTYVYNFLGLAPEQVLSTSIPSSGKHIVGVEFIKEKMSDKNETLGKM CCCCEEEEECCCCEEEEEHHHCCCHHHHHHCCCCCCCCEEEEHHHHHHHHCCCHHHHHHE RLYLDNKVVDEKPFRTQAGHYSLSGEGLCVGRDSGDPVSKQYKAKFDFTGGKIAKVVYDV EEEECCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCCHHHEEEEECCCCEEEEEEEEC SNDAYQNVENEFKVKMAKE CCHHHHCCCCCEEEEECCC >Mature Secondary Structure MKQLFKLLIFLFCSFLMAQNPPKKQEEKKFGGDIKLDIRDSKGDWPAFLETKAPKDAPNV CHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEEECCCCCCCEEEECCCCCCCCCE LIILYDDTGFAAWSPYGGRINMPTMDELAKNGLTYTQWHTTSVCSPTRSTLLTGRNHHQN EEEEECCCCCEEECCCCCEECCCCHHHHHHCCCEEEEECCCCCCCCCHHHHCCCCCCCCC GFGSISESAVGFPGYSGHIPKENATLATVLREAGWSTFWIGKNHNVPVDALDMASSKERW CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCHHHHCCCCCCCC PLGLGFDRFYGFIGGETNQWYPSLIEDNHFIEQPSQPENGYHLSKDLADKAIAYIQDSKQ CCCCCHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC SKPDKPWFMWYNPGANHAPHHAPADYIAKYKGKFDDGYEAYRDWVLKRMIDKGILPKGTK CCCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC MTPLNPMPKGKFAESDMVKPWNSLTADEKKLFSRMAEVYAAYSEFTDAEVGRVIKYLKDS CCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCC GQFDNTLIMYCADNGASAEGSPNGSVNENNFFNAYPDDMSVNLSMIDKLGSEDTYNHYPT CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHCCCCCCCCCCCC GWAAAFSTPFKMFKRYSGYSGGTADPLVICWPKGIKAKGELRSQYYHCTDIVPTILEACG CHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHC LTMPDVVDGVKQTPLAGVSMISSFNNAKAPTAKKVQYYEMVGTRGIWKDGWKATAVHGAL CCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHEEHHHHHCCCCCCCCCCEEEEECCEE PVNIGNFDKDQWELYNVDADRSESTDLAVKYPDKVKELQQIWMDEAKKYHVLPLNDLSIP EEECCCCCCCCEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCC EFHKLEYHKEVPADGRFIYYPGTTEVPEASAAPTLGRSFKILAEVDFTKDSKGVIVSQGS CHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCC RFGGYSLFAKDGKLTYVYNFLGLAPEQVLSTSIPSSGKHIVGVEFIKEKMSDKNETLGKM CCCCEEEEECCCCEEEEEHHHCCCHHHHHHCCCCCCCCEEEEHHHHHHHHCCCHHHHHHE RLYLDNKVVDEKPFRTQAGHYSLSGEGLCVGRDSGDPVSKQYKAKFDFTGGKIAKVVYDV EEEECCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCCHHHEEEEECCCCEEEEEEEEC SNDAYQNVENEFKVKMAKE CCHHHHCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7744061; 10984043 [H]