| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301012
Identifier: 146301012
GI number: 146301012
Start: 3906545
End: 3907057
Strand: Reverse
Name: 146301012
Synonym: Fjoh_3268
Alternate gene names: NA
Gene position: 3907057-3906545 (Counterclockwise)
Preceding gene: 146301013
Following gene: 146301011
Centisome position: 64.08
GC content: 31.38
Gene sequence:
>513_bases ATGGAAGTATTAAATAAACAAGAACGCCAGAAAGCATTTATCGCTTTTTTAATTGCCTTTACCCTGACATTCTGTGTTAT GCTGATTGCAGTTTCGTTCAACTTTTATATGCCCGTGGCAGAAAATAAAATGTTGAAAGCAGAAAATGAAATGATGAAAA GAGAATACGATTATCAAACTAATTTTTCGGTAAAAATTGACAGTATCAGAATGACAATAGACTCAATCAATTCGCCAAAA GTTGATAATGATTTTCAGCAGCGTCTGGCAAATGTTATGATTGCGAATATTTATCAAAAAGTGCCAAAAGACACAACTGA AAACAAAAAATTATATAACAATGTTATTCTGGCCTACAAGAATATTATTGATTATAAAAAACAAATTAGAAGCCTTACAC ACAATTCGCACTTAATAGACAGTTTGAACCAGTCGGCTAAAACATACAAAGAAGAATTAGAAAAAGTAAGCAGAGATCTG GATGTATGCCGTCAGATTTATCAAAATCAATAA
Upstream 100 bases:
>100_bases TTGTTTGTTGCCGAAACAGAGAAAAAAGACATCGTTCATAATCCAAAACGTCACGGTTTCTTTATAAAAGATTAAAAAAA TAAAATAGTAATATAAAATT
Downstream 100 bases:
>100_bases TTAGAAATTTAGAGTAAAGAAATCAATAAACTAATCATTTAAAAATTTGAAATTATGTTGTCAAACTATGGAATTGGAGG TAATGAAGTAAAAATTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MEVLNKQERQKAFIAFLIAFTLTFCVMLIAVSFNFYMPVAENKMLKAENEMMKREYDYQTNFSVKIDSIRMTIDSINSPK VDNDFQQRLANVMIANIYQKVPKDTTENKKLYNNVILAYKNIIDYKKQIRSLTHNSHLIDSLNQSAKTYKEELEKVSRDL DVCRQIYQNQ
Sequences:
>Translated_170_residues MEVLNKQERQKAFIAFLIAFTLTFCVMLIAVSFNFYMPVAENKMLKAENEMMKREYDYQTNFSVKIDSIRMTIDSINSPK VDNDFQQRLANVMIANIYQKVPKDTTENKKLYNNVILAYKNIIDYKKQIRSLTHNSHLIDSLNQSAKTYKEELEKVSRDL DVCRQIYQNQ >Mature_170_residues MEVLNKQERQKAFIAFLIAFTLTFCVMLIAVSFNFYMPVAENKMLKAENEMMKREYDYQTNFSVKIDSIRMTIDSINSPK VDNDFQQRLANVMIANIYQKVPKDTTENKKLYNNVILAYKNIIDYKKQIRSLTHNSHLIDSLNQSAKTYKEELEKVSRDL DVCRQIYQNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20084; Mature: 20084
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVLNKQERQKAFIAFLIAFTLTFCVMLIAVSFNFYMPVAENKMLKAENEMMKREYDYQT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC NFSVKIDSIRMTIDSINSPKVDNDFQQRLANVMIANIYQKVPKDTTENKKLYNNVILAYK CCEEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH NIIDYKKQIRSLTHNSHLIDSLNQSAKTYKEELEKVSRDLDVCRQIYQNQ HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEVLNKQERQKAFIAFLIAFTLTFCVMLIAVSFNFYMPVAENKMLKAENEMMKREYDYQT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC NFSVKIDSIRMTIDSINSPKVDNDFQQRLANVMIANIYQKVPKDTTENKKLYNNVILAYK CCEEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH NIIDYKKQIRSLTHNSHLIDSLNQSAKTYKEELEKVSRDLDVCRQIYQNQ HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA