| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300979
Identifier: 146300979
GI number: 146300979
Start: 3854109
End: 3854462
Strand: Direct
Name: 146300979
Synonym: Fjoh_3234
Alternate gene names: NA
Gene position: 3854109-3854462 (Clockwise)
Preceding gene: 146300969
Following gene: 146300981
Centisome position: 63.21
GC content: 35.59
Gene sequence:
>354_bases ATGACAGCAGATACTAACCGATTTTATAATCAGGATGATTATAATTTCACAGATGATAATCAGAGTTATGTTGACCAATA TCAACAGGAACATATGGGCGACGAAAATTTTGAACAGGAAAAATTATTAAATCAGGATCAAAATTATCTCGATAACGAAT TCTCGAATGCGCTTGACAGAGATGAAGATGATGAAATCGAACCGGAATACGATGAAGATGGTCTGGAAGAAGATGACTGG GACGAAGACGACGATTTAGATGAAAGTGATCTCGACGATGATCTGGTTGAAGATTATGATGAAAATGACCGTGAGATCGA AAGTTTTTCTGATGATGGATATAAAATTGACTAA
Upstream 100 bases:
>100_bases AAATAAACAATCCCAAAAATGCTATAAGACTCCCTGCCAGATATATGATTATTTTTGAATTGAAACTTATATACGATAAA TCAATTAAAACAGATTTTAT
Downstream 100 bases:
>100_bases TGAAAGTCATTTACACTTCTCAAAAAAAAATGCTCAAGCGGAGCAAAATATGTATAGCATAATTTATTCAAATCTGGCTA GATATTTTGCTCCGCTGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MTADTNRFYNQDDYNFTDDNQSYVDQYQQEHMGDENFEQEKLLNQDQNYLDNEFSNALDRDEDDEIEPEYDEDGLEEDDW DEDDDLDESDLDDDLVEDYDENDREIESFSDDGYKID
Sequences:
>Translated_117_residues MTADTNRFYNQDDYNFTDDNQSYVDQYQQEHMGDENFEQEKLLNQDQNYLDNEFSNALDRDEDDEIEPEYDEDGLEEDDW DEDDDLDESDLDDDLVEDYDENDREIESFSDDGYKID >Mature_116_residues TADTNRFYNQDDYNFTDDNQSYVDQYQQEHMGDENFEQEKLLNQDQNYLDNEFSNALDRDEDDEIEPEYDEDGLEEDDWD EDDDLDESDLDDDLVEDYDENDREIESFSDDGYKID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14135; Mature: 14004
Theoretical pI: Translated: 3.16; Mature: 3.16
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADTNRFYNQDDYNFTDDNQSYVDQYQQEHMGDENFEQEKLLNQDQNYLDNEFSNALDR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC DEDDEIEPEYDEDGLEEDDWDEDDDLDESDLDDDLVEDYDENDREIESFSDDGYKID CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure TADTNRFYNQDDYNFTDDNQSYVDQYQQEHMGDENFEQEKLLNQDQNYLDNEFSNALDR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC DEDDEIEPEYDEDGLEEDDWDEDDDLDESDLDDDLVEDYDENDREIESFSDDGYKID CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA